BLASTX nr result

ID: Glycyrrhiza23_contig00005577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005577
         (1576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica...   759   0.0  
ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica...   743   0.0  
ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M...   742   0.0  
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   643   0.0  
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              642   0.0  

>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
            max]
          Length = 1162

 Score =  759 bits (1960), Expect = 0.0
 Identities = 384/486 (79%), Positives = 416/486 (85%)
 Frame = +1

Query: 1    QPGICYHLYSKIRAAALPDFQIPELRRMPIEELCLQVKLLDPSCKIEEFLGKTLDPPVFE 180
            QPGICYHLYS+ RAA+LPDFQIPE+RRMPIEELCLQVKLLDPSCK+EEFL KTLDPPVFE
Sbjct: 679  QPGICYHLYSRTRAASLPDFQIPEIRRMPIEELCLQVKLLDPSCKVEEFLRKTLDPPVFE 738

Query: 181  SIRNAITVLQDIGALSLEEKLTDLGEKLGSLPVHPLTSKMLFFAILMDCLDPALTLACAS 360
            SI NAI VLQDIGA S +EKLT LGEKLGSLPVHPL  +MLFFAILM+CLDPALTLACAS
Sbjct: 739  SISNAILVLQDIGAFSNDEKLTHLGEKLGSLPVHPLICRMLFFAILMNCLDPALTLACAS 798

Query: 361  DYRDPFTLPMLPEEKKRATAAKCELASLYGGCGDQFAVLAAFECWNNAKKMGLESRFCSQ 540
            DYRDPFTLPMLPEEKKRA+AAK ELASLYGGC DQFAVLAAFECWNNAKKMGLE+RFCSQ
Sbjct: 799  DYRDPFTLPMLPEEKKRASAAKSELASLYGGCSDQFAVLAAFECWNNAKKMGLEARFCSQ 858

Query: 541  YFVSASAMQMLFGMRKQLQMELIRNGFILEDASSYSANAYDPGVLHAVLVAGLYPMVGRL 720
            YFVS+SAM ML GMR+QLQ ELIR GFI ED S YS N +DPGVLHAVLVAGLYP VGR 
Sbjct: 859  YFVSSSAMNMLSGMRRQLQAELIRIGFIHEDVSGYSVNTHDPGVLHAVLVAGLYPRVGRF 918

Query: 721  CLPNKGGKRVVVETASGDKVRLHTHSTNFKLSFKRNLDHTLIVYDEITRGDGGMNIRNCT 900
             L NKGGKRV+VET SGDKVRLH HSTNFKLSFK+NLD+TLIVYDEITRGDGGMNIRNCT
Sbjct: 919  -LTNKGGKRVIVETTSGDKVRLHNHSTNFKLSFKKNLDNTLIVYDEITRGDGGMNIRNCT 977

Query: 901  VVGPLPLLLLSTEIAVAPAKXXXXXXXXXXXXXXXXXXXXXXXMECDNKSSGNCEDKFMS 1080
            VVGPLPLLLLSTEIAVAPA+                       ME D +SSG  EDK MS
Sbjct: 978  VVGPLPLLLLSTEIAVAPAE-ENDEGDVDDAVGSEDEAGSEDGMEFDAESSGGREDKLMS 1036

Query: 1081 SPDDMVRIIMDRWLHFGSTAIDVAQLYCLRERLSAAVLYKVTHPRNTLPPILGASMHAMA 1260
            SPD+MV++IMDRWL+F STAIDVAQLYCLRERLSAA+LYKVTHPRNTLPPI+ AS+HA+A
Sbjct: 1037 SPDNMVKVIMDRWLYFRSTAIDVAQLYCLRERLSAAILYKVTHPRNTLPPIMAASVHAIA 1096

Query: 1261 CILSCDGCSGMPVMGDSVDTLTTLVNAANLGKPAMWPKRFGKRPKGSPAELINRDGRQNF 1440
            CILSCDGC G+  M + VDTLTT+VNA +LGKPA   +RFGKRPKGS AEL+N DGRQN 
Sbjct: 1097 CILSCDGCIGVSAMLEGVDTLTTMVNATSLGKPATGTRRFGKRPKGSLAELLNYDGRQNS 1156

Query: 1441 GPSSRA 1458
            GP  +A
Sbjct: 1157 GPHFKA 1162


>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
            max]
          Length = 1164

 Score =  743 bits (1919), Expect = 0.0
 Identities = 376/486 (77%), Positives = 411/486 (84%)
 Frame = +1

Query: 1    QPGICYHLYSKIRAAALPDFQIPELRRMPIEELCLQVKLLDPSCKIEEFLGKTLDPPVFE 180
            QPGICYHLYS+ RA +LPDFQIPE+RRMPIEELCLQVKLLDPSCK+EEFL KTLDPPVFE
Sbjct: 681  QPGICYHLYSRTRAVSLPDFQIPEIRRMPIEELCLQVKLLDPSCKVEEFLCKTLDPPVFE 740

Query: 181  SIRNAITVLQDIGALSLEEKLTDLGEKLGSLPVHPLTSKMLFFAILMDCLDPALTLACAS 360
            SIRNAI VLQDIGALS +EKLT LGEKLGSLPVHPL  +MLFFAILM+CLDPALTLACAS
Sbjct: 741  SIRNAIIVLQDIGALSNDEKLTQLGEKLGSLPVHPLICRMLFFAILMNCLDPALTLACAS 800

Query: 361  DYRDPFTLPMLPEEKKRATAAKCELASLYGGCGDQFAVLAAFECWNNAKKMGLESRFCSQ 540
            DYRDPFTLPMLPEEKKRA+AAK ELASLYGGC DQFA+LAAFECWNNAKKMGLE+RFCSQ
Sbjct: 801  DYRDPFTLPMLPEEKKRASAAKYELASLYGGCSDQFAILAAFECWNNAKKMGLEARFCSQ 860

Query: 541  YFVSASAMQMLFGMRKQLQMELIRNGFILEDASSYSANAYDPGVLHAVLVAGLYPMVGRL 720
            YFVS+S M ML GMR+QLQ ELIR GFI ED S YS N +DPGVL+AVLVAGLYP VGR 
Sbjct: 861  YFVSSSTMNMLSGMRRQLQAELIRLGFIHEDVSGYSVNTHDPGVLNAVLVAGLYPRVGRF 920

Query: 721  CLPNKGGKRVVVETASGDKVRLHTHSTNFKLSFKRNLDHTLIVYDEITRGDGGMNIRNCT 900
             L NK GKRV+VET SGDKVRLH HS NFKLSFK+ LD TLIVYDEITRGDGGMN+RNCT
Sbjct: 921  -LTNKSGKRVIVETTSGDKVRLHNHSINFKLSFKKKLDDTLIVYDEITRGDGGMNLRNCT 979

Query: 901  VVGPLPLLLLSTEIAVAPAKXXXXXXXXXXXXXXXXXXXXXXXMECDNKSSGNCEDKFMS 1080
            VVGPLPLLLLSTEIAVAPA+                       ME D +SSG  EDK MS
Sbjct: 980  VVGPLPLLLLSTEIAVAPAE-ENDEGDEDDVGGSEDEAGSEDVMEFDAESSGGREDKLMS 1038

Query: 1081 SPDDMVRIIMDRWLHFGSTAIDVAQLYCLRERLSAAVLYKVTHPRNTLPPILGASMHAMA 1260
            SPD+MV++IMDRWL+F STAIDVAQLYCLRERLSAA+LYKVT+PRNTLPPI+ AS+HA+A
Sbjct: 1039 SPDNMVKVIMDRWLYFCSTAIDVAQLYCLRERLSAAILYKVTNPRNTLPPIMAASVHAIA 1098

Query: 1261 CILSCDGCSGMPVMGDSVDTLTTLVNAANLGKPAMWPKRFGKRPKGSPAELINRDGRQNF 1440
            CILSCDGC G+P M + V+TLTT+VNA  LGKPA   +RFGKRPKGS AEL+N DGRQ  
Sbjct: 1099 CILSCDGCIGVPAMLEGVETLTTMVNATTLGKPATGTRRFGKRPKGSLAELLNYDGRQTS 1158

Query: 1441 GPSSRA 1458
            GP  +A
Sbjct: 1159 GPYFKA 1164


>ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1190

 Score =  742 bits (1915), Expect = 0.0
 Identities = 376/519 (72%), Positives = 416/519 (80%), Gaps = 25/519 (4%)
 Frame = +1

Query: 1    QPGICYHLYSKIRAAALPDFQIPELRRMPIEELCLQVKLLDPSCKIEEFLGKTLDPPVFE 180
            QPGICYHLYSK+RAA+LPDFQ PEL+RMPIEELCLQVK+LDPSCKIE FL KTLDPPV E
Sbjct: 673  QPGICYHLYSKLRAASLPDFQTPELKRMPIEELCLQVKMLDPSCKIEVFLAKTLDPPVSE 732

Query: 181  SIRNAITVLQDIGALSLEEKLTDLGEKLGSLPVHPLTSKMLFFAILMDCLDPALTLACAS 360
            SIRNAI VL+DIGALS +E LTDLGEKLGSLPVHPL S+MLFFAILM+CLDPALTLACAS
Sbjct: 733  SIRNAIVVLRDIGALSTDETLTDLGEKLGSLPVHPLISRMLFFAILMNCLDPALTLACAS 792

Query: 361  DYRDPFTLPMLPEEKKRATAAKCELASLYGGCGDQFAVLAAFECWNNAKKMGLESRFCSQ 540
            DY+DPFTLPMLPE+KKRA  AK ELASLYGGCGDQFAVLAAFECWNN+KKMGLE+RFCSQ
Sbjct: 793  DYKDPFTLPMLPEDKKRAADAKTELASLYGGCGDQFAVLAAFECWNNSKKMGLEARFCSQ 852

Query: 541  YFVSASAMQMLFGMRKQLQMELIRNGFILEDASSYSANAYDPGVLHAVLVAGLYPMVGRL 720
            YFVS  AM+ML GMRKQLQ ELIR GFIL D SSYS NA+DPGVLHAVLV+G+YPMVGRL
Sbjct: 853  YFVSGGAMKMLSGMRKQLQKELIRIGFILSDVSSYSMNAHDPGVLHAVLVSGMYPMVGRL 912

Query: 721  CLPNKGGKRVVVETASGDKVRLHTHSTNFKLSFKRNLDHTLIVYDEITRGDGGMNIRNCT 900
            C PNKG KR ++ETASGDKVRLH  STNFKLSFKRNL HTL+V+DE+TRGD G+NI+NC+
Sbjct: 913  CFPNKGAKRAIIETASGDKVRLHNRSTNFKLSFKRNLGHTLVVFDEVTRGDMGVNIKNCS 972

Query: 901  VVGPLPLLLLSTEIAVAPAK---XXXXXXXXXXXXXXXXXXXXXXXMECDNKSSGNCEDK 1071
            +VGPLPLLLLSTEIAVAP +                          M+ D KS GN EDK
Sbjct: 973  LVGPLPLLLLSTEIAVAPGEQNDHKKEAEDDDDDEGSGDEAGIDDGMDLDTKSIGNNEDK 1032

Query: 1072 FMSSPDDMVRIIMDRWLHFGSTAIDVAQLYCLRERLSAAVLYKVTHPRNTLPPILGASMH 1251
            FMSSPDDMVRII+DRWL+FGSTAIDV+ LYCLRERLSAA+LYKVT+P N LPPILGAS+H
Sbjct: 1033 FMSSPDDMVRIIVDRWLYFGSTAIDVSLLYCLRERLSAAILYKVTYPSNPLPPILGASIH 1092

Query: 1252 AMACILSCDGCSGMPVMGDSVDTLTTLVNAANLGK----------------------PAM 1365
            A+ACILSCDGCSGM V  D VD LTT+VNA NLGK                      P  
Sbjct: 1093 AIACILSCDGCSGMSVATDGVDNLTTMVNATNLGKPQPQPQPQPQPQPQPQPQPQQQPQP 1152

Query: 1366 WPKRFGKRPKGSPAELINRDGRQNFGPSSRASISAPKNI 1482
             P+R+G RPKGS A  IN  G QN GPS+ AS S  +N+
Sbjct: 1153 QPQRYGNRPKGSSAAFINHGGHQNLGPST-ASTSTSRNV 1190


>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
            vinifera]
          Length = 1231

 Score =  643 bits (1659), Expect = 0.0
 Identities = 325/501 (64%), Positives = 388/501 (77%), Gaps = 4/501 (0%)
 Frame = +1

Query: 1    QPGICYHLYSKIRAAALPDFQIPELRRMPIEELCLQVKLLDPSCKIEEFLGKTLDPPVFE 180
            +PG+CYHLYSK+RAA+LPDFQ+PE++RMPIEELCLQVKLLDP+CKIE+FL KTLDPPVFE
Sbjct: 677  RPGVCYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLRKTLDPPVFE 736

Query: 181  SIRNAITVLQDIGALSLEEKLTDLGEKLGSLPVHPLTSKMLFFAILMDCLDPALTLACAS 360
            +IRNA+ VLQDIGALS++EKLT+LG+KLGSLPVHPLTSKMLFFAIL++CLDPALTLACAS
Sbjct: 737  TIRNAVIVLQDIGALSVDEKLTELGKKLGSLPVHPLTSKMLFFAILLNCLDPALTLACAS 796

Query: 361  DYRDPFTLPMLPEEKKRATAAKCELASLYGGCGDQFAVLAAFECWNNAKKMGLESRFCSQ 540
            DYRDPFTLPMLP EKKRATAAK ELASLYGG  DQ AV+AAFECW +AK+ G E++FCSQ
Sbjct: 797  DYRDPFTLPMLPHEKKRATAAKAELASLYGGHSDQLAVIAAFECWKSAKEKGQEAQFCSQ 856

Query: 541  YFVSASAMQMLFGMRKQLQMELIRNGFILEDASSYSANAYDPGVLHAVLVAGLYPMVGRL 720
            YFVS+  M ML GMRKQLQ ELIRNGFI ED SS S NA DPG++HAVLVAGLYPMVGRL
Sbjct: 857  YFVSSGTMHMLAGMRKQLQTELIRNGFIPEDVSSCSLNARDPGIIHAVLVAGLYPMVGRL 916

Query: 721  CLPNKGGKRVVVETASGDKVRLHTHSTNFKLSFKRNLDHTLIVYDEITRGDGGMNIRNCT 900
              P+K GKR VVETASG KVRLH HS NFKLSFK++    LI+YDEITRGDGGM+IRNCT
Sbjct: 917  LPPHKSGKRSVVETASGAKVRLHPHSNNFKLSFKKSDGRPLIIYDEITRGDGGMHIRNCT 976

Query: 901  VVGPLPLLLLSTEIAVAPAK----XXXXXXXXXXXXXXXXXXXXXXXMECDNKSSGNCED 1068
            V+GPLPLLLL+TEI VAP K                            E +NK +G   +
Sbjct: 977  VIGPLPLLLLATEIVVAPGKGNDDDDEDCDDDSDGDDIDEDDSEGDGKEANNKLNGQQGE 1036

Query: 1069 KFMSSPDDMVRIIMDRWLHFGSTAIDVAQLYCLRERLSAAVLYKVTHPRNTLPPILGASM 1248
            K MSSPD+ V +++DRW  F STA+DVAQ+YCLRERL+AA+ +K TH R  LPP+LGAS+
Sbjct: 1037 KIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHAREVLPPMLGASV 1096

Query: 1249 HAMACILSCDGCSGMPVMGDSVDTLTTLVNAANLGKPAMWPKRFGKRPKGSPAELINRDG 1428
            +A+ACILS DG SG+ +  +SVD+LT++VNA  +   A   +R G+ P      L++  G
Sbjct: 1097 YAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRRMGQNPNNFLKTLMSH-G 1155

Query: 1429 RQNFGPSSRASISAPKNIGNP 1491
             ++  PS        +N  +P
Sbjct: 1156 TRHKSPSKHHKNKGAENWNSP 1176


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  642 bits (1657), Expect = 0.0
 Identities = 324/497 (65%), Positives = 387/497 (77%)
 Frame = +1

Query: 1    QPGICYHLYSKIRAAALPDFQIPELRRMPIEELCLQVKLLDPSCKIEEFLGKTLDPPVFE 180
            +PG+CYHLYSK+RAA+LPDFQ+PE++RMPIEELCLQVKLLDP+CKIE+FL KTLDPPVFE
Sbjct: 665  RPGVCYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLRKTLDPPVFE 724

Query: 181  SIRNAITVLQDIGALSLEEKLTDLGEKLGSLPVHPLTSKMLFFAILMDCLDPALTLACAS 360
            +IRNA+ VLQDIGALS++EKLT+LG+KLGSLPVHPLTSKMLFFAIL++CLDPALTLACAS
Sbjct: 725  TIRNAVIVLQDIGALSVDEKLTELGKKLGSLPVHPLTSKMLFFAILLNCLDPALTLACAS 784

Query: 361  DYRDPFTLPMLPEEKKRATAAKCELASLYGGCGDQFAVLAAFECWNNAKKMGLESRFCSQ 540
            DYRDPFTLPMLP EKKRATAAK ELASLYGG  DQ AV+AAFECW +AK+ G E++FCSQ
Sbjct: 785  DYRDPFTLPMLPHEKKRATAAKAELASLYGGHSDQLAVIAAFECWKSAKEKGQEAQFCSQ 844

Query: 541  YFVSASAMQMLFGMRKQLQMELIRNGFILEDASSYSANAYDPGVLHAVLVAGLYPMVGRL 720
            YFVS+  M ML GMRKQLQ ELIRNGFI ED SS S NA DPG++HAVLVAGLYPMVGRL
Sbjct: 845  YFVSSGTMHMLAGMRKQLQTELIRNGFIPEDVSSCSLNARDPGIIHAVLVAGLYPMVGRL 904

Query: 721  CLPNKGGKRVVVETASGDKVRLHTHSTNFKLSFKRNLDHTLIVYDEITRGDGGMNIRNCT 900
              P+K GKR VVETASG KVRLH HS NFKLSFK++    LI+YDEITRGDGGM+IRNCT
Sbjct: 905  LPPHKSGKRSVVETASGAKVRLHPHSNNFKLSFKKSDGRPLIIYDEITRGDGGMHIRNCT 964

Query: 901  VVGPLPLLLLSTEIAVAPAKXXXXXXXXXXXXXXXXXXXXXXXMECDNKSSGNCEDKFMS 1080
            V+GPLPLLLL+TEI VAP K                          +NK +G   +K MS
Sbjct: 965  VIGPLPLLLLATEIVVAPGK-------------------------ANNKLNGQQGEKIMS 999

Query: 1081 SPDDMVRIIMDRWLHFGSTAIDVAQLYCLRERLSAAVLYKVTHPRNTLPPILGASMHAMA 1260
            SPD+ V +++DRW  F STA+DVAQ+YCLRERL+AA+ +K TH R  LPP+LGAS++A+A
Sbjct: 1000 SPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHAREVLPPMLGASVYAIA 1059

Query: 1261 CILSCDGCSGMPVMGDSVDTLTTLVNAANLGKPAMWPKRFGKRPKGSPAELINRDGRQNF 1440
            CILS DG SG+ +  +SVD+LT++VNA  +   A   +R G+ P      L++  G ++ 
Sbjct: 1060 CILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRRMGQNPNNFLKTLMSH-GTRHK 1118

Query: 1441 GPSSRASISAPKNIGNP 1491
             PS        +N  +P
Sbjct: 1119 SPSKHHKNKGAENWNSP 1135


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