BLASTX nr result

ID: Glycyrrhiza23_contig00005556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005556
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32689.3| unnamed protein product [Vitis vinifera]              288   1e-75
ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [V...   285   7e-75
ref|XP_002523902.1| 40S ribosomal protein S23, putative [Ricinus...   285   1e-74
emb|CBI31516.3| unnamed protein product [Vitis vinifera]              284   2e-74
ref|XP_002326333.1| predicted protein [Populus trichocarpa] gi|2...   284   2e-74

>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  288 bits (736), Expect = 1e-75
 Identities = 146/160 (91%), Positives = 148/160 (92%), Gaps = 8/160 (5%)
 Frame = -2

Query: 783 PPSSTQK--------TEAMGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAG 628
           PP S+Q         + AMGKTRGMGA RKLKSHRRRQRWADKAYKKSNLGNEWKKPFAG
Sbjct: 30  PPPSSQTLAAVEQLLSVAMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAG 89

Query: 627 SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIA 448
           SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIA
Sbjct: 90  SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIA 149

Query: 447 GFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 328
           GFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 150 GFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 189


>ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
          Length = 142

 Score =  285 bits (730), Expect = 7e-75
 Identities = 141/142 (99%), Positives = 141/142 (99%)
 Frame = -2

Query: 753 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 574
           MGKTRGMGA RKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 573 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 394
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 393 VVKVSGVSLLALFKEKKEKPRS 328
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>ref|XP_002523902.1| 40S ribosomal protein S23, putative [Ricinus communis]
           gi|255568414|ref|XP_002525181.1| 40S ribosomal protein
           S23, putative [Ricinus communis]
           gi|223535478|gb|EEF37147.1| 40S ribosomal protein S23,
           putative [Ricinus communis] gi|223536832|gb|EEF38471.1|
           40S ribosomal protein S23, putative [Ricinus communis]
          Length = 142

 Score =  285 bits (729), Expect = 1e-74
 Identities = 141/142 (99%), Positives = 142/142 (100%)
 Frame = -2

Query: 753 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 574
           MGKTRGMGAARKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 573 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 394
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 393 VVKVSGVSLLALFKEKKEKPRS 328
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>emb|CBI31516.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  284 bits (727), Expect = 2e-74
 Identities = 141/150 (94%), Positives = 145/150 (96%)
 Frame = -2

Query: 777 SSTQKTEAMGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLE 598
           + ++ + AMGKTRGMGA RKLKSHR RQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLE
Sbjct: 49  AESRLSAAMGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLE 108

Query: 597 KIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVG 418
           KIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVG
Sbjct: 109 KIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVG 168

Query: 417 DIPGVRFKVVKVSGVSLLALFKEKKEKPRS 328
           DIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 169 DIPGVRFKVVKVSGVSLLALFKEKKEKPRS 198


>ref|XP_002326333.1| predicted protein [Populus trichocarpa]
           gi|224098071|ref|XP_002311115.1| predicted protein
           [Populus trichocarpa] gi|224112945|ref|XP_002316341.1|
           predicted protein [Populus trichocarpa]
           gi|224140159|ref|XP_002323452.1| predicted protein
           [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
           unknown [Populus trichocarpa]
           gi|118484067|gb|ABK93919.1| unknown [Populus
           trichocarpa] gi|118487579|gb|ABK95615.1| unknown
           [Populus trichocarpa] gi|222833526|gb|EEE72003.1|
           predicted protein [Populus trichocarpa]
           gi|222850935|gb|EEE88482.1| predicted protein [Populus
           trichocarpa] gi|222865381|gb|EEF02512.1| predicted
           protein [Populus trichocarpa]
           gi|222868082|gb|EEF05213.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  284 bits (727), Expect = 2e-74
 Identities = 140/142 (98%), Positives = 141/142 (99%)
 Frame = -2

Query: 753 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 574
           MGKTRGMGA RKLKSHRRRQRWADK+YKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 573 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 394
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 393 VVKVSGVSLLALFKEKKEKPRS 328
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


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