BLASTX nr result
ID: Glycyrrhiza23_contig00005549
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00005549
(1161 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni... 369 e-100
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni... 348 1e-93
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] 346 6e-93
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni... 341 2e-91
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni... 341 2e-91
>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 369 bits (947), Expect = e-100
Identities = 176/190 (92%), Positives = 176/190 (92%)
Frame = +1
Query: 151 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 330
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
Query: 331 GVDAHGQPIDPRKIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 510
GVDAHG PIDPRKIQDH SKYGDIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 511 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 690
HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
Query: 691 RRQLFGKYHG 720
RRQLFGK HG
Sbjct: 181 RRQLFGKSHG 190
Score = 75.5 bits (184), Expect = 2e-11
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +1
Query: 916 NRSPVRDSSEERRARIEQWNREREEQEPARKVNAEETNNGDRGYVQNAGTYHGY 1077
+ SPVRD SEERRARIEQWNRERE+QEP KVNAEE NNG NA +HG+
Sbjct: 254 HHSPVRDGSEERRARIEQWNREREDQEPGYKVNAEEINNG------NASKHHGH 301
>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 348 bits (893), Expect = 1e-93
Identities = 162/187 (86%), Positives = 171/187 (91%)
Frame = +1
Query: 151 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 330
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 331 GVDAHGQPIDPRKIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 510
GVD GQP+DPRKIQ+H SKYG+IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 511 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 690
HAANA+RNL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180
Query: 691 RRQLFGK 711
RRQLFG+
Sbjct: 181 RRQLFGR 187
>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 346 bits (888), Expect = 6e-93
Identities = 161/188 (85%), Positives = 170/188 (90%)
Frame = +1
Query: 151 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 330
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LL+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60
Query: 331 GVDAHGQPIDPRKIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 510
GVD GQP+DPRKIQ H SKYG+IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 511 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 690
HA A+RNL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 691 RRQLFGKY 714
RRQLFG+Y
Sbjct: 181 RRQLFGRY 188
>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 341 bits (875), Expect = 2e-91
Identities = 159/187 (85%), Positives = 168/187 (89%)
Frame = +1
Query: 151 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 330
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 331 GVDAHGQPIDPRKIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 510
GVD GQ +DPRK+QDH SKYGD+ESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 511 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 690
AANA+ NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 691 RRQLFGK 711
RR+LFG+
Sbjct: 181 RRRLFGR 187
>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 341 bits (875), Expect = 2e-91
Identities = 159/187 (85%), Positives = 168/187 (89%)
Frame = +1
Query: 151 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 330
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 331 GVDAHGQPIDPRKIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 510
GVD GQ +DPRK+QDH SKYGD+ESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 511 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 690
AANA+ NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 691 RRQLFGK 711
RR+LFG+
Sbjct: 181 RRRLFGR 187