BLASTX nr result

ID: Glycyrrhiza23_contig00005529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005529
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523819.1| 40S ribosomal protein S25, putative [Ricinus...   148   4e-34
gb|ABK21138.1| unknown [Picea sitchensis] gi|116779909|gb|ABK214...   147   7e-34
gb|ABK93334.1| unknown [Populus trichocarpa]                          147   9e-34
gb|ABY60448.1| ribosomal protein S25 [Adonis aestivalis var. pal...   146   2e-33
emb|CBI18574.3| unnamed protein product [Vitis vinifera]              144   6e-33

>ref|XP_002523819.1| 40S ribosomal protein S25, putative [Ricinus communis]
           gi|223536907|gb|EEF38545.1| 40S ribosomal protein S25,
           putative [Ricinus communis]
          Length = 108

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/79 (94%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 182
           KGKQKEKVNNMVLFDQA+YDKLLSE PKYKLITPSILSDRLRINGSLARRAIKDLMARGS
Sbjct: 30  KGKQKEKVNNMVLFDQATYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 89

Query: 183 IRLISSHASQQIYTRATNT 239
           IR+IS+HASQQIYTRATNT
Sbjct: 90  IRMISAHASQQIYTRATNT 108


>gb|ABK21138.1| unknown [Picea sitchensis] gi|116779909|gb|ABK21473.1| unknown
           [Picea sitchensis] gi|116788763|gb|ABK24990.1| unknown
           [Picea sitchensis] gi|116790134|gb|ABK25512.1| unknown
           [Picea sitchensis] gi|116793648|gb|ABK26827.1| unknown
           [Picea sitchensis] gi|148906644|gb|ABR16473.1| unknown
           [Picea sitchensis] gi|148906786|gb|ABR16539.1| unknown
           [Picea sitchensis] gi|224284082|gb|ACN39778.1| unknown
           [Picea sitchensis] gi|224286580|gb|ACN40995.1| unknown
           [Picea sitchensis] gi|224286704|gb|ACN41055.1| unknown
           [Picea sitchensis]
          Length = 108

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/79 (93%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 182
           KGKQKEKVNNMVLFDQA+YDKLLSEAPKYKLITPSILSDRLRINGSLAR+AIKDLMARGS
Sbjct: 30  KGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIKDLMARGS 89

Query: 183 IRLISSHASQQIYTRATNT 239
           IR+IS+H+SQQIYTRATNT
Sbjct: 90  IRMISAHSSQQIYTRATNT 108


>gb|ABK93334.1| unknown [Populus trichocarpa]
          Length = 108

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/79 (92%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 182
           KGKQKEKVNNMVLFDQA+YDKLLSEAPKYKLITPS+LSDRLRI+GSLAR+AIKDLMARGS
Sbjct: 30  KGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIKDLMARGS 89

Query: 183 IRLISSHASQQIYTRATNT 239
           IR++SSHASQQIYTRATNT
Sbjct: 90  IRMVSSHASQQIYTRATNT 108


>gb|ABY60448.1| ribosomal protein S25 [Adonis aestivalis var. palaestina]
          Length = 109

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/79 (92%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 182
           KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLR+NGSLARRAIKDL A+G+
Sbjct: 31  KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLRVNGSLARRAIKDLTAKGA 90

Query: 183 IRLISSHASQQIYTRATNT 239
           IR+IS+HASQQIYTRATNT
Sbjct: 91  IRMISAHASQQIYTRATNT 109


>emb|CBI18574.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/78 (92%), Positives = 76/78 (97%)
 Frame = +3

Query: 3   KGKQKEKVNNMVLFDQASYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 182
           KGKQKEKVNNMVLFDQ +YDKLLSE PKYKLITPSILSDRLRINGSLARRAIKDLMARGS
Sbjct: 73  KGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKDLMARGS 132

Query: 183 IRLISSHASQQIYTRATN 236
           IR++S+HASQQIYTRATN
Sbjct: 133 IRMVSAHASQQIYTRATN 150


Top