BLASTX nr result

ID: Glycyrrhiza23_contig00005496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005496
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238642.1| cold-regulated protein [Glycine max] gi|2130...   224   4e-56
ref|NP_001236659.1| src2 protein [Glycine max] gi|2055230|dbj|BA...   222   2e-55
ref|XP_003529574.1| PREDICTED: uncharacterized protein LOC100784...   181   4e-43
ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242...   169   2e-39
ref|XP_002283998.1| PREDICTED: uncharacterized protein LOC100245...   167   6e-39

>ref|NP_001238642.1| cold-regulated protein [Glycine max] gi|213053828|gb|ACJ39219.1|
            cold-regulated protein [Glycine max]
          Length = 290

 Score =  224 bits (571), Expect = 4e-56
 Identities = 119/160 (74%), Positives = 136/160 (85%), Gaps = 3/160 (1%)
 Frame = -3

Query: 1054 MTMEYRTLELNIISAKDLKDVNLFSKMDVYAVVSVSGDTHHPQSATTNVHKDGGTSPTWN 875
            MTMEYRTLELNIISAKD+K+VNLFSKMDVYAVV++SGD  HPQ ATT+VHKD G++PTWN
Sbjct: 1    MTMEYRTLELNIISAKDIKNVNLFSKMDVYAVVTLSGDPLHPQGATTHVHKDAGSNPTWN 60

Query: 874  FPMKFTVNESLIQQNRLSLEVKLVSHRTLAGATVIGTVHVPLKELLDNDGGD-SLRQVSY 698
            +P+KF+VNESL ++NRLSLE+KLVS RTL G TVIGTVHVPL+EL+DN G D S RQVSY
Sbjct: 61   YPVKFSVNESLAKENRLSLEIKLVSDRTL-GDTVIGTVHVPLRELMDNPGDDGSFRQVSY 119

Query: 697  QVRKSSGKAKGTFNFSYKFRERVEAPAMKSAPK--HEPVM 584
            QV K SGK+KG+ NFSYK  E V APA K APK   EPVM
Sbjct: 120  QVMKQSGKSKGSLNFSYKVGEHVPAPAPK-APKTGQEPVM 158


>ref|NP_001236659.1| src2 protein [Glycine max] gi|2055230|dbj|BAA19769.1| SRC2 [Glycine
            max]
          Length = 290

 Score =  222 bits (565), Expect = 2e-55
 Identities = 118/163 (72%), Positives = 135/163 (82%), Gaps = 6/163 (3%)
 Frame = -3

Query: 1054 MTMEYRTLELNIISAKDLKDVNLFSKMDVYAVVSVSGDTHHPQSATTNVHKDGGTSPTWN 875
            MTMEYRTLELNIISAKD+K+VNLFSKMDVYA VS+SGD  HPQ ATT+VHKD G++PTWN
Sbjct: 1    MTMEYRTLELNIISAKDIKNVNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPTWN 60

Query: 874  FPMKFTVNESLIQQNRLSLEVKLVSHRTLAGATVIGTVHVPLKELLDNDGGD-SLRQVSY 698
            +P+KF+VNESL ++NRLSLE+KL+S RTL G TVIGTVHVPL+ELLDN G D S RQVSY
Sbjct: 61   YPVKFSVNESLAKENRLSLEIKLISDRTL-GDTVIGTVHVPLRELLDNPGDDSSFRQVSY 119

Query: 697  QVRKSSGKAKGTFNFSYKFRERVEAPAMKSAPK-----HEPVM 584
            QV K S K+KG+ NFSYKF E V APA K+ PK      EPVM
Sbjct: 120  QVMKQSRKSKGSLNFSYKFGEHVPAPAAKT-PKAAKAGQEPVM 161


>ref|XP_003529574.1| PREDICTED: uncharacterized protein LOC100784458 [Glycine max]
          Length = 290

 Score =  181 bits (459), Expect = 4e-43
 Identities = 95/150 (63%), Positives = 113/150 (75%), Gaps = 1/150 (0%)
 Frame = -3

Query: 1048 MEYRTLELNIISAKDLKDVNLFSKMDVYAVVSVSGDTHHPQSATTNVHKDGGTSPTWNFP 869
            ME+RTLELN+ SAKDLKD+N+FSKMDVYAV+S+SGD    Q   T VH++GGT+PTWNFP
Sbjct: 1    MEHRTLELNLASAKDLKDLNIFSKMDVYAVLSLSGD----QKTKTPVHRNGGTNPTWNFP 56

Query: 868  MKFTVNESLIQQNRLSLEVKLVSHRTLAGATVIGTVHVPLKELLDNDG-GDSLRQVSYQV 692
            +KFT +ES+ +QNRL+LE+K+ S R LA    IG VHVPL ELL   G G S + VSYQV
Sbjct: 57   VKFTFDESVARQNRLALEIKIRSERALATDKDIGQVHVPLMELLKQPGDGKSFQHVSYQV 116

Query: 691  RKSSGKAKGTFNFSYKFRERVEAPAMKSAP 602
            RK SGK KG  NFSYKF +   APA  SAP
Sbjct: 117  RKPSGKPKGALNFSYKFGDEFAAPAKVSAP 146


>ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242678 [Vitis vinifera]
          Length = 291

 Score =  169 bits (428), Expect = 2e-39
 Identities = 95/156 (60%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
 Frame = -3

Query: 1048 MEYRTLELNIISAKDLKDVNLFSKMDVYAVVSVSGDTHHPQSATTNVHKDGGTSPTWNFP 869
            MEYRTLE+N+ISAKDLKDVNL SKMDVY VVS++GD+   Q   T V +DGGT+PTWNFP
Sbjct: 1    MEYRTLEINVISAKDLKDVNLISKMDVYVVVSINGDSRSKQK--TPVDRDGGTNPTWNFP 58

Query: 868  MKFTVNESLIQQNRLSLEVKLVSHRTLAGATVIGTVHVPLKELLDNDG-GDSLRQVSYQV 692
            MKFTV+ES  QQNRL+L  KL   RTL G   IG V+VP+KELLD  G    ++ VSYQV
Sbjct: 59   MKFTVDESAAQQNRLTLSFKLRCERTL-GDKDIGEVNVPIKELLDPAGESKPIQFVSYQV 117

Query: 691  RKSSGKAKGTFNFSYKFRERVEAPAMKSAPKHEPVM 584
            RK SGK KG  N SYKF E+  + +  +    EPVM
Sbjct: 118  RKPSGKPKGELNLSYKFGEK--SMSQSATKAQEPVM 151


>ref|XP_002283998.1| PREDICTED: uncharacterized protein LOC100245905 [Vitis vinifera]
            gi|147811137|emb|CAN76879.1| hypothetical protein
            VITISV_036709 [Vitis vinifera]
            gi|296089679|emb|CBI39498.3| unnamed protein product
            [Vitis vinifera]
          Length = 276

 Score =  167 bits (423), Expect = 6e-39
 Identities = 91/156 (58%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
 Frame = -3

Query: 1048 MEYRTLELNIISAKDLKDVNLFSKMDVYAVVSVSGDTHHPQSATTNVHKDGGTSPTWNFP 869
            MEYR L++ ++ AKDLKDVNLFSKMDVY VV++SGD    Q   T V KDGGTSP WNF 
Sbjct: 1    MEYRALDIKVLEAKDLKDVNLFSKMDVYVVVTISGDPRTVQK--TPVDKDGGTSPKWNFS 58

Query: 868  MKFTVNESLIQQNRLSLEVKLVSHRTLAGATVIGTVHVPLKELLDNDGGDSL-RQVSYQV 692
            MKFTV+++L  QNR+ L   L S+R L G   IG V+VPLKELLDN   D + R VS+QV
Sbjct: 59   MKFTVDDALAHQNRIGLNFTLRSNRAL-GDRDIGEVYVPLKELLDNASDDKVDRVVSFQV 117

Query: 691  RKSSGKAKGTFNFSYKFRERVEAPAMKSAPKHEPVM 584
            RK SGK +GT +FSYKF E+  APA  +    +PVM
Sbjct: 118  RKQSGKPQGTLSFSYKFGEKFSAPAPAARKADDPVM 153


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