BLASTX nr result

ID: Glycyrrhiza23_contig00005484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005484
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541278.1| PREDICTED: WD repeat-containing protein 75-l...   294   1e-77
ref|XP_003549375.1| PREDICTED: WD repeat-containing protein 75-l...   283   2e-74
ref|XP_003610089.1| WD repeat-containing protein [Medicago trunc...   274   1e-71
ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...   249   4e-64
ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   243   3e-62

>ref|XP_003541278.1| PREDICTED: WD repeat-containing protein 75-like [Glycine max]
          Length = 802

 Score =  294 bits (753), Expect = 1e-77
 Identities = 145/201 (72%), Positives = 169/201 (84%)
 Frame = +2

Query: 80  MRGGQSYVSSAPSFSNDGKRLLVCSGCSVAVFSTATALQVSSLDGHTAAVTSVIVVPSSN 259
           +RGG++YVSSAP+FSNDGKRLLVCSG +V++FSTAT   VSSL+GHTAAVT+V+V+PSS 
Sbjct: 2   IRGGENYVSSAPAFSNDGKRLLVCSGSTVSIFSTATGSLVSSLEGHTAAVTAVVVIPSST 61

Query: 260 NILCYCWTASLDGTIRYWDFSLPECVKILHLHSPIFSMVIPSLSSPTEENNAKTHNLFAY 439
             L YCWTAS+DGTIR+WDFS+PECVKI+ L  PIFSMV+PS+ SP EEN  KT N  AY
Sbjct: 62  G-LSYCWTASVDGTIRHWDFSVPECVKIIDLCLPIFSMVVPSILSPREENGKKTANAIAY 120

Query: 440 VSVQNENAQDKKPKPRHAQIRKCNITNYHKVSNLILKETERPESLTVSPSGKFLGIKEKR 619
           VSVQ  NA D +PKP + QIRKCN+T++  VS LILKETERPESLT+S  G FLGIK+KR
Sbjct: 121 VSVQVINAPDNRPKPLYGQIRKCNLTHFRSVSQLILKETERPESLTISHLGNFLGIKDKR 180

Query: 620 KLHIWRVPKMDSDSAVSKKIT 682
           KLHIW VPK DSDSAVSKKIT
Sbjct: 181 KLHIWAVPKKDSDSAVSKKIT 201


>ref|XP_003549375.1| PREDICTED: WD repeat-containing protein 75-like [Glycine max]
          Length = 803

 Score =  283 bits (724), Expect = 2e-74
 Identities = 141/201 (70%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
 Frame = +2

Query: 80  MRGGQSYVSSAPSFSNDGKRLLVCSGCSVAVFSTATALQVSSLDGHTAAVTSVIVVPSSN 259
           +RGGQ+YVSSAP+FSNDGKRLLVCSG +V++FST T   VSSL+GHTA+VT+V+VVPSS 
Sbjct: 2   IRGGQNYVSSAPAFSNDGKRLLVCSGSTVSIFSTGTGSLVSSLEGHTASVTAVVVVPSST 61

Query: 260 NILCYCWTASLDGTIRYWDFSLPECVKILHLHSPIFSMVIPSLSSPTEENNAKTHNLFAY 439
             L YCWTAS+DGTIR+WDFS+PECV I+ L  PIFSMV+PS+ SP EEN     N+ AY
Sbjct: 62  G-LSYCWTASVDGTIRHWDFSVPECVNIIDLCLPIFSMVVPSILSPREENGKTPPNVIAY 120

Query: 440 VSVQNENAQDKKP-KPRHAQIRKCNITNYHKVSNLILKETERPESLTVSPSGKFLGIKEK 616
           VSVQ   A    P KP + QIRKCN+T++  VSNLI+KETERPESLT+SPSG FLGIK+K
Sbjct: 121 VSVQGIKAPPDNPTKPLYGQIRKCNLTHFRSVSNLIMKETERPESLTISPSGNFLGIKDK 180

Query: 617 RKLHIWRVPKMDSDSAVSKKI 679
           RKLHIW VPK DSDSAVSKKI
Sbjct: 181 RKLHIWAVPKKDSDSAVSKKI 201


>ref|XP_003610089.1| WD repeat-containing protein [Medicago truncatula]
           gi|355511144|gb|AES92286.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 786

 Score =  274 bits (701), Expect = 1e-71
 Identities = 140/201 (69%), Positives = 164/201 (81%)
 Frame = +2

Query: 80  MRGGQSYVSSAPSFSNDGKRLLVCSGCSVAVFSTATALQVSSLDGHTAAVTSVIVVPSSN 259
           M+GGQSYVS +PSFSN G RLLV SG SVA+FST TALQVSSLDGHT  VTSVIVVP SN
Sbjct: 1   MKGGQSYVSCSPSFSNSGDRLLVGSGTSVAIFSTTTALQVSSLDGHTDTVTSVIVVPGSN 60

Query: 260 NILCYCWTASLDGTIRYWDFSLPECVKILHLHSPIFSMVIPSLSSPTEENNAKTHNLFAY 439
            I+ YCWT+SLDGTIR+WDFSL +C+KI+ L  PIFSMVIPSL SP EE + K H  FAY
Sbjct: 61  -IVTYCWTSSLDGTIRHWDFSLLKCIKIIDLKLPIFSMVIPSLLSPEEEISEKKH--FAY 117

Query: 440 VSVQNENAQDKKPKPRHAQIRKCNITNYHKVSNLILKETERPESLTVSPSGKFLGIKEKR 619
           V +Q  N +D +PK   AQIRKCN+T++HK+S + LKET++P  L VSP GKFLGIKEKR
Sbjct: 118 VCMQTGNEKDNRPKLCSAQIRKCNLTDFHKLSTITLKETKKPHPLIVSPCGKFLGIKEKR 177

Query: 620 KLHIWRVPKMDSDSAVSKKIT 682
            LHIW+VPK+DS+SAVSKKI+
Sbjct: 178 TLHIWKVPKVDSNSAVSKKIS 198


>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis]
           gi|223526967|gb|EEF29164.1| wd40 protein, putative
           [Ricinus communis]
          Length = 807

 Score =  249 bits (636), Expect = 4e-64
 Identities = 120/199 (60%), Positives = 151/199 (75%)
 Frame = +2

Query: 86  GGQSYVSSAPSFSNDGKRLLVCSGCSVAVFSTATALQVSSLDGHTAAVTSVIVVPSSNNI 265
           GG+SYV+S P+FSND KRLLVCSG SV++FSTAT LQV+SL+GHTA VT VIVVP+++ I
Sbjct: 4   GGKSYVTSPPAFSNDAKRLLVCSGNSVSIFSTATGLQVASLEGHTALVTRVIVVPATSKI 63

Query: 266 LCYCWTASLDGTIRYWDFSLPECVKILHLHSPIFSMVIPSLSSPTEENNAKTHNLFAYVS 445
           LCYCWTASLDGTIRYWDFS+PE +K + +  PIFSMVIPSL S   E N K   LFAYVS
Sbjct: 64  LCYCWTASLDGTIRYWDFSVPELIKTVDIKFPIFSMVIPSLLSQQAETNEKRSKLFAYVS 123

Query: 446 VQNENAQDKKPKPRHAQIRKCNITNYHKVSNLILKETERPESLTVSPSGKFLGIKEKRKL 625
           ++N    + + K     I+KCN+T+   +  + L ET++P+ +T+SPSGK+ GI  KRKL
Sbjct: 124 IENTKETEDQSKSLRGLIKKCNLTDSRLLGGVTLTETKQPQFITISPSGKYFGIWTKRKL 183

Query: 626 HIWRVPKMDSDSAVSKKIT 682
           HIW VP  DS+ A+ KKIT
Sbjct: 184 HIWIVPSTDSERAIVKKIT 202


>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  243 bits (619), Expect = 3e-62
 Identities = 116/204 (56%), Positives = 154/204 (75%), Gaps = 3/204 (1%)
 Frame = +2

Query: 80  MRGGQSYVSSAPSFSNDGKRLLVCSGCSVAVFSTATALQVSSLDGHTAAVTSVIVVPS-- 253
           ++GG+S VSS P FSND K+LLVC+GC+V++FST+T+LQ++ L+GHTA VTSV+VVP+  
Sbjct: 2   IKGGKSLVSSPPVFSNDAKKLLVCTGCTVSIFSTSTSLQITELEGHTALVTSVVVVPAFT 61

Query: 254 -SNNILCYCWTASLDGTIRYWDFSLPECVKILHLHSPIFSMVIPSLSSPTEENNAKTHNL 430
            S+ ILCYCWT+SLDGT+RYWDFSLPE +K + +  PIFSMVIP + S   E + KT NL
Sbjct: 62  PSSKILCYCWTSSLDGTVRYWDFSLPELMKTVDIRLPIFSMVIPGILSQLAETDGKTPNL 121

Query: 431 FAYVSVQNENAQDKKPKPRHAQIRKCNITNYHKVSNLILKETERPESLTVSPSGKFLGIK 610
           FAY+SV+N   QD +PK  H +I KCN+T     + +IL ET++PE +T+S SGKF G++
Sbjct: 122 FAYLSVENTKIQDDQPKV-HRKILKCNLTKSRLAAGVILAETQQPELITISSSGKFFGVR 180

Query: 611 EKRKLHIWRVPKMDSDSAVSKKIT 682
            KRKLH+W V   D + A  KKIT
Sbjct: 181 NKRKLHVWEVIAHDHEGAPIKKIT 204


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