BLASTX nr result
ID: Glycyrrhiza23_contig00005461
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00005461
(2158 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 h... 856 0.0
ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h... 855 0.0
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h... 751 0.0
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h... 749 0.0
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera] 748 0.0
>ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 543
Score = 856 bits (2212), Expect = 0.0
Identities = 438/550 (79%), Positives = 456/550 (82%)
Frame = +1
Query: 439 MSVNNNNPSKGIGASSSSFGNAGIPSPSMPSNPXXXXXXXXXXXXXXXXXXXPLSQAHAI 618
MSVNNNNPSKGIGASSSSFGNAG+PS S+PSNP PLSQAHAI
Sbjct: 1 MSVNNNNPSKGIGASSSSFGNAGVPSNSIPSNPGFSQSQGQAQIPVGYQGQFPLSQAHAI 60
Query: 619 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSSPLMSTPGN 798
V SSPL+STPGN
Sbjct: 61 VQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGV------SSPLISTPGN 114
Query: 799 ATGKRVPLKPPMRPVGFSPPNSFSPLRPMELTPAAARRKKQKLPEKQLQDKVAAILPESA 978
A+GKR+PLKPPMRPVGFSPPNSFSPLRP+ELTPAA RRKKQKLPEKQLQDKVAAILPESA
Sbjct: 115 ASGKRIPLKPPMRPVGFSPPNSFSPLRPVELTPAA-RRKKQKLPEKQLQDKVAAILPESA 173
Query: 979 LYTQLLEFESRVDAALSRKKVDIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAEP 1158
LYTQLLEFESRVDAAL+RKK DIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAE
Sbjct: 174 LYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAEL 233
Query: 1159 PTWTLKIIGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPENHVIVWEN 1338
PTWTLKI+GRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYP+NH+I+WEN
Sbjct: 234 PTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIIMWEN 293
Query: 1339 SRSPTLHEGFEVKRKGDKEFSANIRLEMNYAPEKFKLSPALTEVLGIEVDTRPRIIAAIW 1518
+RSP HEGFEVKRKGDKEF+ NIRLEMNY PEKFKLSPALTEVLGIEVDTRPRI+AAIW
Sbjct: 294 ARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIW 353
Query: 1519 HYVKARKLQNPNDPSFFHCDQPLQKVFGEEKVKFTTVSQKISHHLFPPQPILLEHKIKLS 1698
HYVKARKLQNPNDPS+FHCDQPL KVFGEEK+KFT VSQKIS HLFPPQPILLEHKIKLS
Sbjct: 354 HYVKARKLQNPNDPSYFHCDQPLLKVFGEEKMKFTMVSQKISSHLFPPQPILLEHKIKLS 413
Query: 1699 GNSPAGTACYDVTVDVPFPIQRELSALLANVEKNKEIETCDEAICGXXXXXXXXXXXXAF 1878
GN+PAGTACYDV VDVPFPIQRELSALLANVEKNKEIETCDEAICG AF
Sbjct: 414 GNNPAGTACYDVMVDVPFPIQRELSALLANVEKNKEIETCDEAICGIIRKIHEHRRRRAF 473
Query: 1879 FLGFSQSPVEFINALIESQSKDLKLAAGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP 2058
FLGFSQSPVEFINALIESQSKDLKL +GEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP
Sbjct: 474 FLGFSQSPVEFINALIESQSKDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP 533
Query: 2059 AAGSDAPGST 2088
A GSDAPGST
Sbjct: 534 AVGSDAPGST 543
>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 543
Score = 855 bits (2209), Expect = 0.0
Identities = 436/550 (79%), Positives = 455/550 (82%)
Frame = +1
Query: 439 MSVNNNNPSKGIGASSSSFGNAGIPSPSMPSNPXXXXXXXXXXXXXXXXXXXPLSQAHAI 618
MSVNNNNPSKGIGASSS+FGNAGIPS S+PSNP PLSQAHAI
Sbjct: 1 MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQSQGQAQIPVGFQGQFPLSQAHAI 60
Query: 619 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSSPLMSTPGN 798
V SSP +STPGN
Sbjct: 61 VQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGV------SSPSISTPGN 114
Query: 799 ATGKRVPLKPPMRPVGFSPPNSFSPLRPMELTPAAARRKKQKLPEKQLQDKVAAILPESA 978
A+GKR+P+KPPMRPVGFSPPNSFSPLRPMELTPAA RRKKQKLPEKQLQDKVAAILPESA
Sbjct: 115 ASGKRIPMKPPMRPVGFSPPNSFSPLRPMELTPAA-RRKKQKLPEKQLQDKVAAILPESA 173
Query: 979 LYTQLLEFESRVDAALSRKKVDIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAEP 1158
LYTQLLEFESRVDAAL+RKK DIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPN EP
Sbjct: 174 LYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEP 233
Query: 1159 PTWTLKIIGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPENHVIVWEN 1338
PTWTLKI+GRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYP+NH+I+WEN
Sbjct: 234 PTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWEN 293
Query: 1339 SRSPTLHEGFEVKRKGDKEFSANIRLEMNYAPEKFKLSPALTEVLGIEVDTRPRIIAAIW 1518
+RSP HEGFEVKRKGDKEF+ NIRLEMNY PEKFKLSPALTEVLGIEVDTRPRI+AAIW
Sbjct: 294 ARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIW 353
Query: 1519 HYVKARKLQNPNDPSFFHCDQPLQKVFGEEKVKFTTVSQKISHHLFPPQPILLEHKIKLS 1698
HYVKARKLQNPNDPS+FHCD PLQKVFGEE +KFT VSQKIS HLFPPQPILLEHKIKLS
Sbjct: 354 HYVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLS 413
Query: 1699 GNSPAGTACYDVTVDVPFPIQRELSALLANVEKNKEIETCDEAICGXXXXXXXXXXXXAF 1878
GNSPAGTACYDV VDVPFPIQRELSALLANVEKNK+IETCDEAICG AF
Sbjct: 414 GNSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAF 473
Query: 1879 FLGFSQSPVEFINALIESQSKDLKLAAGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP 2058
FLGFSQSPVEFINALIESQS+DLKL +GEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP
Sbjct: 474 FLGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP 533
Query: 2059 AAGSDAPGST 2088
AAGSDAPGST
Sbjct: 534 AAGSDAPGST 543
>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 548
Score = 751 bits (1938), Expect = 0.0
Identities = 389/550 (70%), Positives = 419/550 (76%)
Frame = +1
Query: 439 MSVNNNNPSKGIGASSSSFGNAGIPSPSMPSNPXXXXXXXXXXXXXXXXXXXPLSQAHAI 618
M+VNNNNP K +GASSS FGNAG+ SP+MP+NP LSQAH
Sbjct: 1 MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQ- 59
Query: 619 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSSPLMSTPGN 798
SSP + PGN
Sbjct: 60 AHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGN 119
Query: 799 ATGKRVPLKPPMRPVGFSPPNSFSPLRPMELTPAAARRKKQKLPEKQLQDKVAAILPESA 978
+ KR KPP+RP G N+ SPL+ MELTPAA RRKKQKLPEKQLQD+VAAILPESA
Sbjct: 120 SNMKRTLQKPPVRPPGPLGANTISPLKVMELTPAA-RRKKQKLPEKQLQDRVAAILPESA 178
Query: 979 LYTQLLEFESRVDAALSRKKVDIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAEP 1158
LYTQLLEFESRVDAAL+RKK+DIQEALKNPPC+QKTLRIY+FNTFANQIRTIPKKPNAEP
Sbjct: 179 LYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEP 238
Query: 1159 PTWTLKIIGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPENHVIVWEN 1338
PTWTLKIIGRILE+GVDPDQ ++ KS+ YPKFS+FFKRVTISLDQRLYP+N +I+WEN
Sbjct: 239 PTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWEN 298
Query: 1339 SRSPTLHEGFEVKRKGDKEFSANIRLEMNYAPEKFKLSPALTEVLGIEVDTRPRIIAAIW 1518
+RSP HEGFEVKRKGDKEF+ NIRLEMNY PEKFKLS AL EVLGIEVDTRPRIIAAIW
Sbjct: 299 ARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIW 358
Query: 1519 HYVKARKLQNPNDPSFFHCDQPLQKVFGEEKVKFTTVSQKISHHLFPPQPILLEHKIKLS 1698
HYVKARKLQNPNDPSFF+CD PLQKVFGE+K+KFT VSQKIS HL PPQPI LEHKIKLS
Sbjct: 359 HYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLS 418
Query: 1699 GNSPAGTACYDVTVDVPFPIQRELSALLANVEKNKEIETCDEAICGXXXXXXXXXXXXAF 1878
GN PAG ACYDV VDVPFPIQ+ELSALLAN EKNKEI+ CDEAIC AF
Sbjct: 419 GNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAF 478
Query: 1879 FLGFSQSPVEFINALIESQSKDLKLAAGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP 2058
FLGFSQSPVEFIN LIESQSKDLKL AGE SRNAEKERRSDFFNQPWVEDAVIRYLNRKP
Sbjct: 479 FLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKP 538
Query: 2059 AAGSDAPGST 2088
AGSDAPGST
Sbjct: 539 VAGSDAPGST 548
>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
complex component SNF12 homolog [Cucumis sativus]
Length = 547
Score = 749 bits (1935), Expect = 0.0
Identities = 372/441 (84%), Positives = 395/441 (89%)
Frame = +1
Query: 766 SSSPLMSTPGNATGKRVPLKPPMRPVGFSPPNSFSPLRPMELTPAAARRKKQKLPEKQLQ 945
S SP STPG A KR+P KPP+RP SP +FSPL+ MELTPAA R+KKQKLPEKQLQ
Sbjct: 108 SPSPGFSTPGLAGVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAA-RKKKQKLPEKQLQ 166
Query: 946 DKVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPPCIQKTLRIYVFNTFANQI 1125
DKVAAILPESALYTQLLEFESRVDAAL+RKKVDI EALKNPPCIQKTLRIYVFNTFANQ+
Sbjct: 167 DKVAAILPESALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQV 226
Query: 1126 RTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRL 1305
TIPKKPNA+PPTWTLKIIGRILEDG+DPD PGVVQ+S+PLYPKFS+FFKRVTISLDQRL
Sbjct: 227 NTIPKKPNADPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRL 286
Query: 1306 YPENHVIVWENSRSPTLHEGFEVKRKGDKEFSANIRLEMNYAPEKFKLSPALTEVLGIEV 1485
YP++H+IVWEN+RSP HEGFEVKRKGDKEFS NIRLEMNY PEKFKLSPAL EVLGIEV
Sbjct: 287 YPDSHIIVWENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEV 346
Query: 1486 DTRPRIIAAIWHYVKARKLQNPNDPSFFHCDQPLQKVFGEEKVKFTTVSQKISHHLFPPQ 1665
DTRPRIIAAIWHYVKARKLQNPNDPSFFHCD PLQKVFGE+K+KFT VSQ+IS HLFPPQ
Sbjct: 347 DTRPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQ 406
Query: 1666 PILLEHKIKLSGNSPAGTACYDVTVDVPFPIQRELSALLANVEKNKEIETCDEAICGXXX 1845
PI LEHK+KLSGNSPAGTACYDV VDVPFPI RELSALLAN EKNKEI+ CDEAIC
Sbjct: 407 PIHLEHKVKLSGNSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIR 466
Query: 1846 XXXXXXXXXAFFLGFSQSPVEFINALIESQSKDLKLAAGEPSRNAEKERRSDFFNQPWVE 2025
AFFLGFSQSPVEFI+ALIESQSKDLKL AGE SRNAEKERRSDFFNQPWVE
Sbjct: 467 KIHEHRRRRAFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVE 526
Query: 2026 DAVIRYLNRKPAAGSDAPGST 2088
DAVIRY+NRKPA GSDAPGST
Sbjct: 527 DAVIRYINRKPATGSDAPGST 547
>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
Length = 548
Score = 748 bits (1932), Expect = 0.0
Identities = 388/550 (70%), Positives = 418/550 (76%)
Frame = +1
Query: 439 MSVNNNNPSKGIGASSSSFGNAGIPSPSMPSNPXXXXXXXXXXXXXXXXXXXPLSQAHAI 618
M+VNNNNP K +GASSS FGNAG+ SP+MP+NP LSQAH
Sbjct: 1 MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQ- 59
Query: 619 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSSPLMSTPGN 798
SSP + PGN
Sbjct: 60 AHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGN 119
Query: 799 ATGKRVPLKPPMRPVGFSPPNSFSPLRPMELTPAAARRKKQKLPEKQLQDKVAAILPESA 978
+ KR KPP+RP G N+ SPL+ MELTPAA RRKKQKLPEKQLQD+VAAILPESA
Sbjct: 120 SNMKRXLQKPPVRPPGPLGANTISPLKVMELTPAA-RRKKQKLPEKQLQDRVAAILPESA 178
Query: 979 LYTQLLEFESRVDAALSRKKVDIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAEP 1158
LYTQLLEFESRVDAAL+RKK+DIQEALKNPPC+QKTLRIY+FNTF NQIRTIPKKPNAEP
Sbjct: 179 LYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAEP 238
Query: 1159 PTWTLKIIGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPENHVIVWEN 1338
PTWTLKIIGRILE+GVDPDQ ++ KS+ YPKFS+FFKRVTISLDQRLYP+N +I+WEN
Sbjct: 239 PTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWEN 298
Query: 1339 SRSPTLHEGFEVKRKGDKEFSANIRLEMNYAPEKFKLSPALTEVLGIEVDTRPRIIAAIW 1518
+RSP HEGFEVKRKGDKEF+ NIRLEMNY PEKFKLS AL EVLGIEVDTRPRIIAAIW
Sbjct: 299 ARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIW 358
Query: 1519 HYVKARKLQNPNDPSFFHCDQPLQKVFGEEKVKFTTVSQKISHHLFPPQPILLEHKIKLS 1698
HYVKARKLQNPNDPSFF+CD PLQKVFGE+K+KFT VSQKIS HL PPQPI LEHKIKLS
Sbjct: 359 HYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLS 418
Query: 1699 GNSPAGTACYDVTVDVPFPIQRELSALLANVEKNKEIETCDEAICGXXXXXXXXXXXXAF 1878
GN PAG ACYDV VDVPFPIQ+ELSALLAN EKNKEI+ CDEAIC AF
Sbjct: 419 GNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAF 478
Query: 1879 FLGFSQSPVEFINALIESQSKDLKLAAGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKP 2058
FLGFSQSPVEFIN LIESQSKDLKL AGE SRNAEKERRSDFFNQPWVEDAVIRYLNRKP
Sbjct: 479 FLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKP 538
Query: 2059 AAGSDAPGST 2088
AGSDAPGST
Sbjct: 539 VAGSDAPGST 548