BLASTX nr result

ID: Glycyrrhiza23_contig00005448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005448
         (2292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag...   722   0.0  
ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   721   0.0  
ref|XP_003545384.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   716   0.0  
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   648   0.0  
emb|CBI31778.3| unnamed protein product [Vitis vinifera]              647   0.0  

>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 802

 Score =  722 bits (1864), Expect = 0.0
 Identities = 367/423 (86%), Positives = 389/423 (91%), Gaps = 1/423 (0%)
 Frame = -1

Query: 2283 TARPFHSRPQPLLFHASFSSRAGYAVADFPFEEGSKGN-DEGLEIAKLGISQDIVSALEK 2107
            TAR FHS+ QPLLF AS +SRAGYA   FPFEE SK N DEGLEIAKLGISQDIVSALEK
Sbjct: 38   TARSFHSKSQPLLFRASSASRAGYAAEAFPFEEPSKSNSDEGLEIAKLGISQDIVSALEK 97

Query: 2106 KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRDPLA 1927
            KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRG+DPLA
Sbjct: 98   KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLA 157

Query: 1926 LVLAPTRELARQVEKEFYEVAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLL 1747
            LVLAPTRELA+QVEKEFYE APNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLL
Sbjct: 158  LVLAPTRELAKQVEKEFYEAAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLL 217

Query: 1746 NRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQITRN 1567
            NRGALNLK+VQFV+LDEADQMLQVGFQEDVEKILERLP +RQTLMFSATMP+WIKQ+TRN
Sbjct: 218  NRGALNLKEVQFVILDEADQMLQVGFQEDVEKILERLPAERQTLMFSATMPTWIKQLTRN 277

Query: 1566 YLKDPLTIDLVGDSDQKLADGISLFSIVSDHYVKAGILTPLITEHAKGGKCIVFTQTKRD 1387
            YLK+PLTIDLVGDSDQKLADGISL+SI+SD YVKAGI+ PLI EHAKGGKCIVFTQTKRD
Sbjct: 278  YLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPLIKEHAKGGKCIVFTQTKRD 337

Query: 1386 ADRLSYSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVI 1207
            ADR+S+ MSKS+ CEALHGDISQ QRERTLAGFR GHFNVLVATDVASRGLDIPNVDLVI
Sbjct: 338  ADRISHGMSKSIPCEALHGDISQIQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVI 397

Query: 1206 HYELPNNSEIFVHXXXXXXXXXXXXXAILIYTEDQSRTVRTIERDVGCRFKELPKIAVDS 1027
            HYELPNNSEIFVH             AIL+YT+DQSRT+RTIERDVGC+F ELPKIAVD+
Sbjct: 398  HYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRTIERDVGCKFSELPKIAVDT 457

Query: 1026 GSV 1018
             S+
Sbjct: 458  ASL 460


>ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine max]
          Length = 595

 Score =  721 bits (1860), Expect = 0.0
 Identities = 377/454 (83%), Positives = 393/454 (86%), Gaps = 1/454 (0%)
 Frame = -1

Query: 2292 AASTARPFHSRPQPLLFHASFSSRAGYAVADFPFEEGSKGN-DEGLEIAKLGISQDIVSA 2116
            AA  +R FHS P PL F AS   RA YAV DFP+EEGSKGN DEGLEIAKLGISQDIVSA
Sbjct: 43   AAVNSRTFHSNPGPLNFRASSCHRAEYAVDDFPYEEGSKGNADEGLEIAKLGISQDIVSA 102

Query: 2115 LEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRD 1936
            L KKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+IQFNAKHGRGRD
Sbjct: 103  LAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQFNAKHGRGRD 162

Query: 1935 PLALVLAPTRELARQVEKEFYEVAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRII 1756
            PLALVLAPTRELARQVE EF E APNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRII
Sbjct: 163  PLALVLAPTRELARQVESEFCESAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRII 222

Query: 1755 DLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQI 1576
            DLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQI
Sbjct: 223  DLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQI 282

Query: 1575 TRNYLKDPLTIDLVGDSDQKLADGISLFSIVSDHYVKAGILTPLITEHAKGGKCIVFTQT 1396
            +RNYL +PLTIDLVGDSDQKLADGISL+SI +D YVKAGIL PLITEHAKGGKCIVFTQT
Sbjct: 283  SRNYLNNPLTIDLVGDSDQKLADGISLYSIATDLYVKAGILAPLITEHAKGGKCIVFTQT 342

Query: 1395 KRDADRLSYSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVD 1216
            KRDADRLSY+M++S+KCEALHGDISQAQRE+TLAGFR GHFNVLVATDVASRGLDIPNVD
Sbjct: 343  KRDADRLSYAMARSVKCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVD 402

Query: 1215 LVIHYELPNNSEIFVHXXXXXXXXXXXXXAILIYTEDQSRTVRTIERDVGCRFKELPKIA 1036
            LVIHY+LPNNSEIFVH             AIL+YTEDQSR V+ IERDVG RF ELP+IA
Sbjct: 403  LVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKLIERDVGSRFSELPRIA 462

Query: 1035 VDSGSVDTXXXXXXXXXXXXXXXXRDRRYGDADF 934
            VDS S                   RDRRYGD  F
Sbjct: 463  VDSASA-VMVDSMGGGRFGSFGGNRDRRYGDMGF 495


>ref|XP_003545384.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine max]
          Length = 610

 Score =  716 bits (1847), Expect = 0.0
 Identities = 375/455 (82%), Positives = 394/455 (86%), Gaps = 2/455 (0%)
 Frame = -1

Query: 2292 AASTARPFHSRPQPLLFHASFSSRAGYAVADFPFEEGSKGN--DEGLEIAKLGISQDIVS 2119
            AA  +R FHS   PL F +S   RA YAV DFP+EEGSKGN  DEGLEIAKLGIS+DIVS
Sbjct: 37   AAFISRTFHSNTGPLNFRSSSCHRAEYAVDDFPYEEGSKGNAADEGLEIAKLGISEDIVS 96

Query: 2118 ALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGR 1939
            AL KKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGR
Sbjct: 97   ALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGR 156

Query: 1938 DPLALVLAPTRELARQVEKEFYEVAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRI 1759
            DPLALVLAPTRELARQVE EF E APNLDTICVYGGTPIS+QMR+LDYGVDIAVGTPGRI
Sbjct: 157  DPLALVLAPTRELARQVETEFCESAPNLDTICVYGGTPISRQMRELDYGVDIAVGTPGRI 216

Query: 1758 IDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQ 1579
            IDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQ
Sbjct: 217  IDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQ 276

Query: 1578 ITRNYLKDPLTIDLVGDSDQKLADGISLFSIVSDHYVKAGILTPLITEHAKGGKCIVFTQ 1399
            I+RNYL +PLTIDLVGDSDQKLADGISL+SI +D YVKAGIL PLITEHAKGGKCIVFTQ
Sbjct: 277  ISRNYLNNPLTIDLVGDSDQKLADGISLYSIATDLYVKAGILAPLITEHAKGGKCIVFTQ 336

Query: 1398 TKRDADRLSYSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNV 1219
            TKRDADRLSY+M++S+KCEALHGDISQAQRE+TLAGFR GHFNVLVATDVASRGLDIPNV
Sbjct: 337  TKRDADRLSYTMARSVKCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNV 396

Query: 1218 DLVIHYELPNNSEIFVHXXXXXXXXXXXXXAILIYTEDQSRTVRTIERDVGCRFKELPKI 1039
            DLVIHY+LPNNSEIFVH             AIL+YTEDQSR V+ IERDVG RF ELP+I
Sbjct: 397  DLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKLIERDVGSRFTELPRI 456

Query: 1038 AVDSGSVDTXXXXXXXXXXXXXXXXRDRRYGDADF 934
            AVDS SVD                 RDRRYGD  F
Sbjct: 457  AVDSASVD-MVGGMGGGRFGSFGGTRDRRYGDTGF 490


>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  648 bits (1671), Expect = 0.0
 Identities = 326/422 (77%), Positives = 369/422 (87%), Gaps = 1/422 (0%)
 Frame = -1

Query: 2277 RPFHSRPQPLLFHASFSSRAGYAVADFPFEE-GSKGNDEGLEIAKLGISQDIVSALEKKG 2101
            R F S+  PL F AS  SRA YAVADF  EE  SKG DEGLEI+KLGI+Q+IVSAL  KG
Sbjct: 75   RNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIVSALANKG 134

Query: 2100 ITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRDPLALV 1921
            ITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+IQ+NAKHGRGR+PLALV
Sbjct: 135  ITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLALV 194

Query: 1920 LAPTRELARQVEKEFYEVAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNR 1741
            LAPTRELARQVEKEF E APNLDT+CVYGGTPIS+QM  LDYGVD+ VGTPGRIIDL+ R
Sbjct: 195  LAPTRELARQVEKEFXESAPNLDTLCVYGGTPISRQMNSLDYGVDVVVGTPGRIIDLIKR 254

Query: 1740 GALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQITRNYL 1561
            GALNL +VQFVVLDEADQML VGF+EDVE ILE+LP  RQ++MFSATMPSWI+++T+ YL
Sbjct: 255  GALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYL 314

Query: 1560 KDPLTIDLVGDSDQKLADGISLFSIVSDHYVKAGILTPLITEHAKGGKCIVFTQTKRDAD 1381
            K+PLTIDLVGDSDQKLA+GISL+SI S+ Y KA I+ PLITEHAKGGKCIVFTQTKRDAD
Sbjct: 315  KNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHAKGGKCIVFTQTKRDAD 374

Query: 1380 RLSYSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHY 1201
            RL+Y+M+++ +CEALHGDISQ+QRERTL+GFR+GHFNVLVATDVA+RGLDIPNVDL+IHY
Sbjct: 375  RLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLIIHY 434

Query: 1200 ELPNNSEIFVHXXXXXXXXXXXXXAILIYTEDQSRTVRTIERDVGCRFKELPKIAVDSGS 1021
            ELPN+SEIFVH             AILIY E Q+RTVR IERD+GC+F ELP+IA++ GS
Sbjct: 435  ELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPRIAIEGGS 494

Query: 1020 VD 1015
             D
Sbjct: 495  RD 496


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  647 bits (1670), Expect = 0.0
 Identities = 326/422 (77%), Positives = 369/422 (87%), Gaps = 1/422 (0%)
 Frame = -1

Query: 2277 RPFHSRPQPLLFHASFSSRAGYAVADFPFEE-GSKGNDEGLEIAKLGISQDIVSALEKKG 2101
            R F S+  PL F AS  SRA YAVADF  EE  SKG DEGLEI+KLGI+Q+IVSAL  KG
Sbjct: 75   RNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIVSALANKG 134

Query: 2100 ITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRDPLALV 1921
            ITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+IQ+NAKHGRGR+PLALV
Sbjct: 135  ITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLALV 194

Query: 1920 LAPTRELARQVEKEFYEVAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNR 1741
            LAPTRELARQVEKEF E APNLDT+CVYGGTPIS+QM  LDYGVD+ VGTPGRIIDL+ R
Sbjct: 195  LAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYGVDVVVGTPGRIIDLIKR 254

Query: 1740 GALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQITRNYL 1561
            GALNL +VQFVVLDEADQML VGF+EDVE ILE+LP  RQ++MFSATMPSWI+++T+ YL
Sbjct: 255  GALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYL 314

Query: 1560 KDPLTIDLVGDSDQKLADGISLFSIVSDHYVKAGILTPLITEHAKGGKCIVFTQTKRDAD 1381
            K+PLTIDLVGDSDQKLA+GISL+SI S+ Y KA I+ PLITEHAKGGKCIVFTQTKRDAD
Sbjct: 315  KNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHAKGGKCIVFTQTKRDAD 374

Query: 1380 RLSYSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHY 1201
            RL+Y+M+++ +CEALHGDISQ+QRERTL+GFR+GHFNVLVATDVA+RGLDIPNVDL+IHY
Sbjct: 375  RLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIPNVDLIIHY 434

Query: 1200 ELPNNSEIFVHXXXXXXXXXXXXXAILIYTEDQSRTVRTIERDVGCRFKELPKIAVDSGS 1021
            ELPN+SEIFVH             AILIY E Q+RTVR IERD+GC+F ELP+IA++ GS
Sbjct: 435  ELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPRIAIEGGS 494

Query: 1020 VD 1015
             D
Sbjct: 495  RD 496


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