BLASTX nr result

ID: Glycyrrhiza23_contig00005412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005412
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   340   6e-91
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   340   6e-91
gb|AFK33823.1| unknown [Lotus japonicus]                              334   3e-89
gb|AFK48804.1| unknown [Lotus japonicus]                              332   1e-88
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               328   2e-87

>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  340 bits (871), Expect = 6e-91
 Identities = 162/184 (88%), Positives = 167/184 (90%), Gaps = 1/184 (0%)
 Frame = +3

Query: 330 EQGPGATAMQSQLVCNGCRSILLYPRGATNVCCALCNTITPVPPPGMDMSQLYCGGCRTL 509
           E GPGA AMQSQLVCNGCR+ LLYPRGATNVCCALCNTIT VPPPGMDMSQLYCGGCRTL
Sbjct: 40  EHGPGAAAMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTL 99

Query: 510 LMYTRGATSVRCSCCHTVNLAP-ANQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNIS 686
           LMYTRGATSVRCSCCHTVNLAP +NQVAHVPC NCRTTLMYPYGAPSVKCAVCHYITNI+
Sbjct: 100 LMYTRGATSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNIN 159

Query: 687 MSNGRLPIPVHRPNGATNSGTLPSTSTSMPHSQSQTVVVENPMSVDSSGKLVSNXXXXXX 866
           MSNGRLPIP HRP+G T+SG LPSTSTSMP SQSQTVVVENPMSVDSSGKLVSN      
Sbjct: 160 MSNGRLPIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVT 219

Query: 867 XDKK 878
            DKK
Sbjct: 220 TDKK 223


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  340 bits (871), Expect = 6e-91
 Identities = 162/184 (88%), Positives = 167/184 (90%), Gaps = 1/184 (0%)
 Frame = +3

Query: 330 EQGPGATAMQSQLVCNGCRSILLYPRGATNVCCALCNTITPVPPPGMDMSQLYCGGCRTL 509
           E GPGA AMQSQLVCNGCR+ LLYPRGATNVCCALCNTIT VPPPGMDMSQLYCGGCRTL
Sbjct: 28  EHGPGAAAMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTL 87

Query: 510 LMYTRGATSVRCSCCHTVNLAP-ANQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNIS 686
           LMYTRGATSVRCSCCHTVNLAP +NQVAHVPC NCRTTLMYPYGAPSVKCAVCHYITNI+
Sbjct: 88  LMYTRGATSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNIN 147

Query: 687 MSNGRLPIPVHRPNGATNSGTLPSTSTSMPHSQSQTVVVENPMSVDSSGKLVSNXXXXXX 866
           MSNGRLPIP HRP+G T+SG LPSTSTSMP SQSQTVVVENPMSVDSSGKLVSN      
Sbjct: 148 MSNGRLPIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVT 207

Query: 867 XDKK 878
            DKK
Sbjct: 208 TDKK 211


>gb|AFK33823.1| unknown [Lotus japonicus]
          Length = 175

 Score =  334 bits (856), Expect = 3e-89
 Identities = 155/175 (88%), Positives = 161/175 (92%)
 Frame = +3

Query: 354 MQSQLVCNGCRSILLYPRGATNVCCALCNTITPVPPPGMDMSQLYCGGCRTLLMYTRGAT 533
           MQSQLVCNGCRSILLYPRGATNVCCALCNTIT VPPPGMDMSQLYCGGCRTLLMYTRGA 
Sbjct: 1   MQSQLVCNGCRSILLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAA 60

Query: 534 SVRCSCCHTVNLAPANQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNISMSNGRLPIP 713
           SVRCSCCHTVNLAPANQVAHVPC NCRTTLMYPYGAPSVKCA+CHYITN++MSNGRL +P
Sbjct: 61  SVRCSCCHTVNLAPANQVAHVPCGNCRTTLMYPYGAPSVKCALCHYITNVNMSNGRLQVP 120

Query: 714 VHRPNGATNSGTLPSTSTSMPHSQSQTVVVENPMSVDSSGKLVSNXXXXXXXDKK 878
           +HRPNG TNSG LPSTSTSMP SQ+QTVVVENPMSVDSSGKLVSN       DKK
Sbjct: 121 MHRPNGTTNSGALPSTSTSMPQSQTQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 175


>gb|AFK48804.1| unknown [Lotus japonicus]
          Length = 175

 Score =  332 bits (851), Expect = 1e-88
 Identities = 154/175 (88%), Positives = 161/175 (92%)
 Frame = +3

Query: 354 MQSQLVCNGCRSILLYPRGATNVCCALCNTITPVPPPGMDMSQLYCGGCRTLLMYTRGAT 533
           MQSQLVCNGCRSILLYPRGATNVCCALCNTIT VPPPGMDMSQLYCGGCRTLLM+TRGA 
Sbjct: 1   MQSQLVCNGCRSILLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMHTRGAA 60

Query: 534 SVRCSCCHTVNLAPANQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNISMSNGRLPIP 713
           SVRCSCCHTVNLAPANQVAHVPC NCRTTLMYPYGAPSVKCA+CHYITN++MSNGRL +P
Sbjct: 61  SVRCSCCHTVNLAPANQVAHVPCGNCRTTLMYPYGAPSVKCALCHYITNVNMSNGRLQVP 120

Query: 714 VHRPNGATNSGTLPSTSTSMPHSQSQTVVVENPMSVDSSGKLVSNXXXXXXXDKK 878
           +HRPNG TNSG LPSTSTSMP SQ+QTVVVENPMSVDSSGKLVSN       DKK
Sbjct: 121 MHRPNGTTNSGALPSTSTSMPQSQTQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 175


>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  328 bits (841), Expect = 2e-87
 Identities = 154/176 (87%), Positives = 162/176 (92%), Gaps = 1/176 (0%)
 Frame = +3

Query: 354 MQSQLVCNGCRSILLYPRGATNVCCALCNTITPVPPPGMDMSQLYCGGCRTLLMYTRGAT 533
           MQSQLVCNGCR++LLYPRGATNVCCALCNTI+PVPPPGMDMSQLYCGGCRTLLMYTRGAT
Sbjct: 1   MQSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 534 SVRCSCCHTVNLAP-ANQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNISMSNGRLPI 710
           SVRCSCCHTVNLAP +NQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNI+MSNGR+P+
Sbjct: 61  SVRCSCCHTVNLAPVSNQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRVPV 120

Query: 711 PVHRPNGATNSGTLPSTSTSMPHSQSQTVVVENPMSVDSSGKLVSNXXXXXXXDKK 878
           P +RP G TN GTLPSTSTSMP SQ QTVVVENPMSVDSSGKLVSN       DKK
Sbjct: 121 PANRPQGTTNLGTLPSTSTSMPQSQGQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 176


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