BLASTX nr result

ID: Glycyrrhiza23_contig00005406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005406
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531039.1| PREDICTED: protein trpH-like [Glycine max]        761   0.0  
ref|XP_003524745.1| PREDICTED: protein trpH-like [Glycine max]        746   0.0  
ref|XP_004136869.1| PREDICTED: protein TrpH-like [Cucumis sativu...   638   e-180
ref|XP_002299681.1| predicted protein [Populus trichocarpa] gi|2...   615   e-174
ref|XP_002264419.2| PREDICTED: protein trpH-like [Vitis vinifera]     538   e-150

>ref|XP_003531039.1| PREDICTED: protein trpH-like [Glycine max]
          Length = 458

 Score =  761 bits (1966), Expect = 0.0
 Identities = 377/420 (89%), Positives = 395/420 (94%)
 Frame = -3

Query: 1343 MTHEQVLAFKSVSEWVFLDQXXXXXXXXXXXSCVVDDFGVQKTLGKGGDKVLFELHSHSK 1164
            MTHEQVLAFK VSEWVFLD            SCVVDDFGVQK LG+GG+K+LFELHSHSK
Sbjct: 39   MTHEQVLAFKLVSEWVFLDHPSASSSSSSAASCVVDDFGVQKPLGRGGEKLLFELHSHSK 98

Query: 1163 CSDGFLSPSKVIEKAHMNGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFST 984
             SDGF SPSKV+E+AH+NGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFS 
Sbjct: 99   FSDGFFSPSKVVERAHINGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFSP 158

Query: 983  RGDSEAEEPVHILAYYSSIGPSRFEELDKFLSNIRDGRYLRAKNIVLKLNKLKMPLKWEH 804
            RGDSE EEPVHILAYYSSIGPSRFEELDKFLSNIRDGR+LRA+NIVLKLNKLK+PLKWEH
Sbjct: 159  RGDSEVEEPVHILAYYSSIGPSRFEELDKFLSNIRDGRFLRAQNIVLKLNKLKLPLKWEH 218

Query: 803  VCRIAGNGVAPGRLHVARAMVEAGYVENLKQAFARYLFDDGPAYSKGSEPVAEEAIQMIC 624
            VCRIAG GVAPGRLHVARAM+EAGYVENL+QAFARYLFD GPAYS GSEP+AEEAI+MI 
Sbjct: 219  VCRIAGKGVAPGRLHVARAMLEAGYVENLRQAFARYLFDGGPAYSTGSEPLAEEAIKMIS 278

Query: 623  HTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDGKLAAYSDLADAYGLLKIGGSD 444
            HTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDG+LAAYSDLADAYGLLKIGGSD
Sbjct: 279  HTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDGRLAAYSDLADAYGLLKIGGSD 338

Query: 443  YHGRGGHHESELGSVNLPVLVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRFG 264
            YHGRGGH+ESELGSVNLPV+VLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRFG
Sbjct: 339  YHGRGGHNESELGSVNLPVIVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRFG 398

Query: 263  RTRVFKGGSPLNCGQDLIDHCLPLWLTSQEMENAEFEAIKLKLSNVSVSQGGIQVLIETK 84
            RT  FKGGSP +CGQDLIDHCLPLWL+SQEMENAEFEAIKLKLSNVSVSQGGIQVLIETK
Sbjct: 399  RTWSFKGGSPFSCGQDLIDHCLPLWLSSQEMENAEFEAIKLKLSNVSVSQGGIQVLIETK 458


>ref|XP_003524745.1| PREDICTED: protein trpH-like [Glycine max]
          Length = 455

 Score =  746 bits (1925), Expect = 0.0
 Identities = 369/420 (87%), Positives = 391/420 (93%)
 Frame = -3

Query: 1343 MTHEQVLAFKSVSEWVFLDQXXXXXXXXXXXSCVVDDFGVQKTLGKGGDKVLFELHSHSK 1164
            MTHEQVLAFK VSEWVFLD             CVVDDFGVQK LG+GG+K+LFELHSHSK
Sbjct: 38   MTHEQVLAFKLVSEWVFLDHPSASSSSSSS--CVVDDFGVQKPLGRGGEKLLFELHSHSK 95

Query: 1163 CSDGFLSPSKVIEKAHMNGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFST 984
             SDGF SPSKV+E+AH+NGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEIST+FS 
Sbjct: 96   FSDGFFSPSKVVERAHLNGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTMFSP 155

Query: 983  RGDSEAEEPVHILAYYSSIGPSRFEELDKFLSNIRDGRYLRAKNIVLKLNKLKMPLKWEH 804
            RGDSE +EPVHILAYYSSIGPSRFEELDKFLSNIRDGR+LRA+NIVLKLNKLK+PLKWEH
Sbjct: 156  RGDSEVKEPVHILAYYSSIGPSRFEELDKFLSNIRDGRFLRAQNIVLKLNKLKLPLKWEH 215

Query: 803  VCRIAGNGVAPGRLHVARAMVEAGYVENLKQAFARYLFDDGPAYSKGSEPVAEEAIQMIC 624
            VCRIAG GVAPGRLHVARAMVEAGYVENL+QAFARYLFD GPAY+ GSEP+AEEAI+MIC
Sbjct: 216  VCRIAGKGVAPGRLHVARAMVEAGYVENLRQAFARYLFDGGPAYATGSEPLAEEAIKMIC 275

Query: 623  HTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDGKLAAYSDLADAYGLLKIGGSD 444
            HTGGVAVLAHPWALKNP+PI+R LKEAGLHGMEVYKSDG+LAAYSDLADAYGLLKIGGSD
Sbjct: 276  HTGGVAVLAHPWALKNPIPIIRGLKEAGLHGMEVYKSDGRLAAYSDLADAYGLLKIGGSD 335

Query: 443  YHGRGGHHESELGSVNLPVLVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRFG 264
            YHGRGGH+ESELGSVNLPVLVLHDFL VARPIWCNAIREILECYAEEPSDSNLATITRFG
Sbjct: 336  YHGRGGHNESELGSVNLPVLVLHDFLMVARPIWCNAIREILECYAEEPSDSNLATITRFG 395

Query: 263  RTRVFKGGSPLNCGQDLIDHCLPLWLTSQEMENAEFEAIKLKLSNVSVSQGGIQVLIETK 84
            RTR+FKGGSPL+ GQDLIDHCLPLWL+SQEMENA FEAIKLKLSNVS S  GIQVLIETK
Sbjct: 396  RTRIFKGGSPLSFGQDLIDHCLPLWLSSQEMENAGFEAIKLKLSNVSDSHEGIQVLIETK 455


>ref|XP_004136869.1| PREDICTED: protein TrpH-like [Cucumis sativus]
            gi|449478899|ref|XP_004155448.1| PREDICTED: protein
            TrpH-like [Cucumis sativus]
          Length = 443

 Score =  638 bits (1645), Expect = e-180
 Identities = 307/410 (74%), Positives = 359/410 (87%)
 Frame = -3

Query: 1343 MTHEQVLAFKSVSEWVFLDQXXXXXXXXXXXSCVVDDFGVQKTLGKGGDKVLFELHSHSK 1164
            MT EQ+ AFK V+EW +LDQ             VVDDFGVQKT+GKGG+KV+FELHSHSK
Sbjct: 31   MTSEQIAAFKYVTEWAYLDQSNSLASSAAAS--VVDDFGVQKTVGKGGEKVVFELHSHSK 88

Query: 1163 CSDGFLSPSKVIEKAHMNGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFST 984
            CSDGFL+PSK++E+AH NGVKVLALTDHDTMSGIPEAVE+AR++GIKIIPGVEISTIFS 
Sbjct: 89   CSDGFLTPSKLVERAHGNGVKVLALTDHDTMSGIPEAVEAARRFGIKIIPGVEISTIFSN 148

Query: 983  RGDSEAEEPVHILAYYSSIGPSRFEELDKFLSNIRDGRYLRAKNIVLKLNKLKMPLKWEH 804
             GDSE+EEPVHILAYYSS GP++ E+L+KFL NIR+GR+LRAKN+V KLN+LK+PLKW+H
Sbjct: 149  GGDSESEEPVHILAYYSSCGPAKIEKLEKFLENIREGRFLRAKNMVSKLNELKLPLKWDH 208

Query: 803  VCRIAGNGVAPGRLHVARAMVEAGYVENLKQAFARYLFDDGPAYSKGSEPVAEEAIQMIC 624
            V +I G GVAPGRLHVARA+VEAGYVENLKQAF+RYLFD GPAYS GSEP A EAIQ+I 
Sbjct: 209  VAKITGKGVAPGRLHVARALVEAGYVENLKQAFSRYLFDGGPAYSTGSEPCAAEAIQLIH 268

Query: 623  HTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDGKLAAYSDLADAYGLLKIGGSD 444
             TGG+AVLAHPWALKNPV ++RRLK+AGLHG+EVY+SDG+LAAYSDLAD YGLLK+GGSD
Sbjct: 269  DTGGMAVLAHPWALKNPVAVIRRLKDAGLHGLEVYRSDGRLAAYSDLADNYGLLKLGGSD 328

Query: 443  YHGRGGHHESELGSVNLPVLVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRFG 264
            +HGRGGH ESE+GSVNLPVL +HDFLK ARP+WC+AIR+ILE Y EEPS+SNLA ITRFG
Sbjct: 329  FHGRGGHSESEVGSVNLPVLAMHDFLKAARPVWCSAIRDILESYVEEPSESNLAKITRFG 388

Query: 263  RTRVFKGGSPLNCGQDLIDHCLPLWLTSQEMENAEFEAIKLKLSNVSVSQ 114
            RTRV KGGS    G DLI+ CL LWLT++E +N EFEAI+LKLS++S++Q
Sbjct: 389  RTRVLKGGSSPGSGNDLIERCLTLWLTNEEKQNDEFEAIRLKLSHISINQ 438


>ref|XP_002299681.1| predicted protein [Populus trichocarpa] gi|222846939|gb|EEE84486.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  615 bits (1587), Expect = e-174
 Identities = 306/412 (74%), Positives = 355/412 (86%), Gaps = 1/412 (0%)
 Frame = -3

Query: 1343 MTHEQVLAFKSVSEWVFLDQXXXXXXXXXXXSCVVDDFGVQKT-LGKGGDKVLFELHSHS 1167
            MT EQ LA KSVSEWV+LD+                DFGV KT + +  DKV+FELH+HS
Sbjct: 1    MTVEQTLASKSVSEWVYLDRKLVADDF---------DFGVHKTVMMRREDKVVFELHTHS 51

Query: 1166 KCSDGFLSPSKVIEKAHMNGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFS 987
            K SDGFLSPSK++E+AH NGVKVLALTDHDTMSGIPEA E+AR++GIKIIPGVEIST+FS
Sbjct: 52   KFSDGFLSPSKLVERAHGNGVKVLALTDHDTMSGIPEATEAARRFGIKIIPGVEISTMFS 111

Query: 986  TRGDSEAEEPVHILAYYSSIGPSRFEELDKFLSNIRDGRYLRAKNIVLKLNKLKMPLKWE 807
             R + EAEEPVHILAYYSS GP+R +EL+KFL+NIRDGRYLRAK++VLKLNKLK+PLKWE
Sbjct: 112  PR-NPEAEEPVHILAYYSSGGPTRSDELEKFLANIRDGRYLRAKDMVLKLNKLKLPLKWE 170

Query: 806  HVCRIAGNGVAPGRLHVARAMVEAGYVENLKQAFARYLFDDGPAYSKGSEPVAEEAIQMI 627
            HV RI G GVAPGRLHVARAMVEAGYVENLKQAFARYL+D GPAYS G+EP+ EEA+Q+I
Sbjct: 171  HVTRITGKGVAPGRLHVARAMVEAGYVENLKQAFARYLYDGGPAYSTGNEPLVEEAVQLI 230

Query: 626  CHTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDGKLAAYSDLADAYGLLKIGGS 447
            C TGGVAVLAHPWALKNPV I++RLK+AGLHGMEVY+SDGKLA YSDLADAYGLLK+GGS
Sbjct: 231  CETGGVAVLAHPWALKNPVAIIQRLKDAGLHGMEVYRSDGKLAVYSDLADAYGLLKLGGS 290

Query: 446  DYHGRGGHHESELGSVNLPVLVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRF 267
            DYHGRGG+ ESELGSVNLP + LHDFLKVARPIW +AI++I E YAEEPSD NLA IT+F
Sbjct: 291  DYHGRGGNSESELGSVNLPAIALHDFLKVARPIWYHAIKDIFERYAEEPSDLNLARITKF 350

Query: 266  GRTRVFKGGSPLNCGQDLIDHCLPLWLTSQEMENAEFEAIKLKLSNVSVSQG 111
            G T++ KG SP++CG+DLID CL LWLT++E + AEFEAIK+KLS V+++QG
Sbjct: 351  GGTKILKGNSPMSCGKDLIDRCLSLWLTTEERQTAEFEAIKIKLSCVTINQG 402


>ref|XP_002264419.2| PREDICTED: protein trpH-like [Vitis vinifera]
          Length = 341

 Score =  538 bits (1386), Expect = e-150
 Identities = 259/330 (78%), Positives = 296/330 (89%)
 Frame = -3

Query: 1106 VKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFSTRGDSEAEEPVHILAYYSSI 927
            VKVLALTDHDTMSGIPEA+E+ARK+G++IIPGVEIST+FS RG+S +EEPVH+LAYYSS 
Sbjct: 6    VKVLALTDHDTMSGIPEALEAARKFGMRIIPGVEISTMFSPRGESGSEEPVHVLAYYSSC 65

Query: 926  GPSRFEELDKFLSNIRDGRYLRAKNIVLKLNKLKMPLKWEHVCRIAGNGVAPGRLHVARA 747
            GP+R EEL+KFL+NIRDGRYLRAKN+VLKLN LK+PLKWEHV +IAG GVAPGRLHVARA
Sbjct: 66   GPTRCEELEKFLANIRDGRYLRAKNMVLKLNNLKLPLKWEHVAKIAGKGVAPGRLHVARA 125

Query: 746  MVEAGYVENLKQAFARYLFDDGPAYSKGSEPVAEEAIQMICHTGGVAVLAHPWALKNPVP 567
            MVEAG+VENL+QAFARYL+D GPAYS GSEP AEEA+++IC TGGVAVLAHPWALKNPV 
Sbjct: 126  MVEAGHVENLRQAFARYLYDGGPAYSTGSEPQAEEAVKLICETGGVAVLAHPWALKNPVT 185

Query: 566  IVRRLKEAGLHGMEVYKSDGKLAAYSDLADAYGLLKIGGSDYHGRGGHHESELGSVNLPV 387
            IVRRLK+AGLHG+EVY+SDGKLAAY+DLAD YGL+K+GGSDYHGRGG  ES+LGSVNLPV
Sbjct: 186  IVRRLKDAGLHGIEVYRSDGKLAAYNDLADDYGLVKLGGSDYHGRGGQGESDLGSVNLPV 245

Query: 386  LVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRFGRTRVFKGGSPLNCGQDLID 207
            L +HDFLKVARPIWCNAIR ILE Y +EPSD NL  ITRF R R  KG SPL CG+DLID
Sbjct: 246  LAVHDFLKVARPIWCNAIRNILESYIKEPSDMNLEQITRFARNRNSKGDSPLGCGKDLID 305

Query: 206  HCLPLWLTSQEMENAEFEAIKLKLSNVSVS 117
             CL  WLT++E +N EFEAIKLK SN+S++
Sbjct: 306  LCLTSWLTNEERQNPEFEAIKLKFSNISIN 335


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