BLASTX nr result

ID: Glycyrrhiza23_contig00005238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005238
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   190   1e-46
ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [M...   180   9e-44
ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   161   5e-38
ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   157   7e-37
emb|CBI17373.3| unnamed protein product [Vitis vinifera]              157   7e-37

>ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Glycine max]
          Length = 622

 Score =  190 bits (482), Expect = 1e-46
 Identities = 91/103 (88%), Positives = 98/103 (95%)
 Frame = +2

Query: 8   LPLAAEEGFTGLMCDSQTSTDKLPFSVEDLEEFSKDELLSVDSEGRCIITDHSHFVLFNV 187
           LPLAAEEGFTGL+ +SQTS DKLPF +EDLEEFSKDELLS+DSEGRCIITDH+HFVLFN+
Sbjct: 92  LPLAAEEGFTGLLGNSQTSNDKLPFLMEDLEEFSKDELLSLDSEGRCIITDHTHFVLFNL 151

Query: 188 YGPRAGSDDTERIQFKQRFYSILQKRWESLLHQGRRIFVVGDL 316
           YGPRAG DDTERIQFKQ+FY ILQKRWESLLHQGRRIFVVGDL
Sbjct: 152 YGPRAGGDDTERIQFKQKFYRILQKRWESLLHQGRRIFVVGDL 194


>ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355523340|gb|AET03794.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 613

 Score =  180 bits (457), Expect = 9e-44
 Identities = 88/106 (83%), Positives = 96/106 (90%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   AALPLAAEEGFTGLMCDSQTSTDKLPFSVE-DLEEFSKDELLSVDSEGRCIITDHSHFVL 178
           AALPLAAEEGFTGL+C SQTS  KLPF +E DLE+FSKDELL+VDSEGRC++TDH HFVL
Sbjct: 90  AALPLAAEEGFTGLLCSSQTSEGKLPFFMEEDLEDFSKDELLNVDSEGRCVVTDHGHFVL 149

Query: 179 FNVYGPRAGSDDTERIQFKQRFYSILQKRWESLLHQGRRIFVVGDL 316
           FN+YGPRAG DDTERIQFK+ FY ILQKR ESLLHQGRRIFVVGDL
Sbjct: 150 FNIYGPRAGGDDTERIQFKKTFYRILQKRLESLLHQGRRIFVVGDL 195


>ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
           lyase 2-like [Glycine max]
          Length = 566

 Score =  161 bits (408), Expect = 5e-38
 Identities = 80/103 (77%), Positives = 89/103 (86%)
 Frame = +2

Query: 8   LPLAAEEGFTGLMCDSQTSTDKLPFSVEDLEEFSKDELLSVDSEGRCIITDHSHFVLFNV 187
           L LA +EGFTGL+ + QTS +KLPF + DL EF+KDELLS+DSEGRCIITDH+HFVLFNV
Sbjct: 92  LQLAEKEGFTGLLGNFQTSNNKLPFLMGDLXEFTKDELLSLDSEGRCIITDHTHFVLFNV 151

Query: 188 YGPRAGSDDTERIQFKQRFYSILQKRWESLLHQGRRIFVVGDL 316
           YG +AG DDTERIQFKQ FY ILQKRW SLLHQGRRIFVV DL
Sbjct: 152 YGSQAGGDDTERIQFKQIFYRILQKRWGSLLHQGRRIFVVVDL 194


>ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           2 [Vitis vinifera]
          Length = 596

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/107 (72%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
 Frame = +2

Query: 5   ALPLAAEEGFTGLMCDSQ---TSTDKLPFSVEDLEEFSKDELLSVDSEGRCIITDHSHFV 175
           ALP+AAEEGFTGL+  S    T  D++P   E LEEF+KDELL VDSEGRCIITDH HFV
Sbjct: 62  ALPIAAEEGFTGLLEKSGGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFV 121

Query: 176 LFNVYGPRAGSDDTERIQFKQRFYSILQKRWESLLHQGRRIFVVGDL 316
           LFN+YGPRA S+DTERIQFK  F+ ILQKRWE+L  QGRRIFVVGDL
Sbjct: 122 LFNIYGPRADSEDTERIQFKHTFFQILQKRWETLQQQGRRIFVVGDL 168


>emb|CBI17373.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/107 (72%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
 Frame = +2

Query: 5   ALPLAAEEGFTGLMCDSQ---TSTDKLPFSVEDLEEFSKDELLSVDSEGRCIITDHSHFV 175
           ALP+AAEEGFTGL+  S    T  D++P   E LEEF+KDELL VDSEGRCIITDH HFV
Sbjct: 91  ALPIAAEEGFTGLLEKSGGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFV 150

Query: 176 LFNVYGPRAGSDDTERIQFKQRFYSILQKRWESLLHQGRRIFVVGDL 316
           LFN+YGPRA S+DTERIQFK  F+ ILQKRWE+L  QGRRIFVVGDL
Sbjct: 151 LFNIYGPRADSEDTERIQFKHTFFQILQKRWETLQQQGRRIFVVGDL 197


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