BLASTX nr result
ID: Glycyrrhiza23_contig00005232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00005232
(2517 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g... 768 0.0
ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g... 764 0.0
ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatul... 719 0.0
ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatul... 719 0.0
ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g... 693 0.0
>ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 548
Score = 768 bits (1983), Expect = 0.0
Identities = 400/504 (79%), Positives = 421/504 (83%), Gaps = 1/504 (0%)
Frame = +3
Query: 177 MTGQRSSYGKRPHSQSDHDRGGNKRRNVGDDREQFVIDSEDTVYRYLCPGRKIGSVIGRG 356
M GQRS YGKRPHSQSDHD G NKRRN GDDREQFVID EDTVYRY+CPGRKIGSVIGRG
Sbjct: 1 MGGQRSGYGKRPHSQSDHDNGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGRG 60
Query: 357 GEIVKQLRVETKSKIRIGETVPGYEERVVTIYSPSDETNTLEDGGRYVSPAQEALFKVHD 536
GEIVKQLRVETK+KIRIGETVPG EERVVTIYSPSDETN +E GG YVSPAQ+ALFKVHD
Sbjct: 61 GEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVSPAQDALFKVHD 120
Query: 537 RVVAEDLHSDQDEEGGPQVTAKLLVPSDXXXXXXXXXXXXXXSIRSETGAQIRILKDEHL 716
RVVAED H DQD++GG QVTAKLLVPSD +IRSETGAQIRILKD+HL
Sbjct: 121 RVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDHL 180
Query: 717 PACALSSDELVQISGDAAVVKKALHQIASRLHDNPSRSQHLLTSAVPAVYPAGGSLMGPT 896
P CALSSDELVQI+GDA+VVKKAL QIASRLHDNPSRSQHLLTSAVP VYPAGGSL+GP
Sbjct: 181 PLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIGPG 240
Query: 897 AGAPIVGIAPLVXXXXXXXXXXXXW-PRSLYSAPRDETSSKEFSVRLVCPTXXXXXXXXX 1073
AGAPIVGIAPLV W PRS+YSAPRDE S+KEFSVRLVCPT
Sbjct: 241 AGAPIVGIAPLVGAYGGYKGDTGDWPPRSMYSAPRDEASTKEFSVRLVCPTGNIGGVIGK 300
Query: 1074 XXXXXXXXRQDSGATIKVDSSATEGDDCLIIISTKEFFEETFSPTIEAAVRLQPRCSEKV 1253
RQ+SGATIKVDSS TEGD+CLI ISTKEFFEETFSPTIEAAVRLQPRCSEKV
Sbjct: 301 GGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKV 360
Query: 1254 ERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRILSKENLPKIASEDDEM 1433
ERDSGIISFTTRLLV TSRIGCLIGKGGSIITEMRRLTKANIRI+SKENLPKIASEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDDEM 420
Query: 1434 VQISGDLDVAKDALVHVLTRLRANLFDREGAVSTFLPVLPYLPVSADGPDGLSYDSRDGK 1613
VQISGDLD+AKDALVHVLTRLRANLFDREGA+S+FLPVLPYLPVSADG DGL+YD RDGK
Sbjct: 421 VQISGDLDIAKDALVHVLTRLRANLFDREGALSSFLPVLPYLPVSADGSDGLNYDGRDGK 480
Query: 1614 XXXXXXXXXXXXXXXNDLAAGDPY 1685
+DLAAGD Y
Sbjct: 481 RHGRGHSYSSGYGGSSDLAAGDIY 504
>ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 561
Score = 764 bits (1974), Expect = 0.0
Identities = 398/504 (78%), Positives = 418/504 (82%), Gaps = 1/504 (0%)
Frame = +3
Query: 177 MTGQRSSYGKRPHSQSDHDRGGNKRRNVGDDREQFVIDSEDTVYRYLCPGRKIGSVIGRG 356
M GQRS YGKRPHSQSDHD G NKRRN GDDREQFVIDSEDTVYRY+CPGRKIGSVIGRG
Sbjct: 1 MGGQRSGYGKRPHSQSDHDNGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGRG 60
Query: 357 GEIVKQLRVETKSKIRIGETVPGYEERVVTIYSPSDETNTLEDGGRYVSPAQEALFKVHD 536
GEIVKQLRVETK+KIRIGETVPG EERVVTIY PSDETN +E GG YVSPAQ+ALFKVHD
Sbjct: 61 GEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKVHD 120
Query: 537 RVVAEDLHSDQDEEGGPQVTAKLLVPSDXXXXXXXXXXXXXXSIRSETGAQIRILKDEHL 716
RVVAED H DQD++GG QVTAKLLVPSD +IR ETGAQIRILKD+HL
Sbjct: 121 RVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDHL 180
Query: 717 PACALSSDELVQISGDAAVVKKALHQIASRLHDNPSRSQHLLTSAVPAVYPAGGSLMGPT 896
P CALSSDELVQI+GDAAVVKKAL+QIASRLHDNPSRSQHLLTSAV VYPAGGSL+GP
Sbjct: 181 PMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIGPG 240
Query: 897 AGAPIVGIAPLVXXXXXXXXXXXXW-PRSLYSAPRDETSSKEFSVRLVCPTXXXXXXXXX 1073
AGAPIVGIAPLV W PRS+YSAPRDE SSKEFSVRLVCPT
Sbjct: 241 AGAPIVGIAPLVGSYGGYKGDTGDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVIGK 300
Query: 1074 XXXXXXXXRQDSGATIKVDSSATEGDDCLIIISTKEFFEETFSPTIEAAVRLQPRCSEKV 1253
RQDSGATIKVDSS EGD+CLI ISTKEFFEETFSPTIEAAVRLQPRCSEKV
Sbjct: 301 GGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKV 360
Query: 1254 ERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRILSKENLPKIASEDDEM 1433
ERDSGIISFTTRLLV T+RIGCLIGKGGSIIT+MRRLTKANIRI+SKENLPKIA+EDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDDEM 420
Query: 1434 VQISGDLDVAKDALVHVLTRLRANLFDREGAVSTFLPVLPYLPVSADGPDGLSYDSRDGK 1613
VQISGDLDVAKDALVHVLTRLRANLFDREGA+S FLPVLPYLPVSADG DGL+YD RDGK
Sbjct: 421 VQISGDLDVAKDALVHVLTRLRANLFDREGALSAFLPVLPYLPVSADGSDGLNYDGRDGK 480
Query: 1614 XXXXXXXXXXXXXXXNDLAAGDPY 1685
+DLAAGD Y
Sbjct: 481 RHGRGHSYSSGYGGSSDLAAGDVY 504
>ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein
[Medicago truncatula]
Length = 569
Score = 719 bits (1856), Expect = 0.0
Identities = 379/505 (75%), Positives = 414/505 (81%), Gaps = 5/505 (0%)
Frame = +3
Query: 186 QRSSYGKRPHSQSDHDRGGNKRRNVGD---DREQFVIDSEDTVYRYLCPGRKIGSVIGRG 356
+RS+YGKRP SQSD+D GGNKRRN GD DREQFVI+ EDTV+RYLCPGRKIGS+IGRG
Sbjct: 6 ERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGSIIGRG 65
Query: 357 GEIVKQLRVETKSKIRIGETVPGYEERVVTIYSPSDETNTLEDGGRYVSPAQEALFKVHD 536
GEIVKQLRVETK+KIRIGETVPG +ERVVT+YS SDETNT++DG + VSPA++ALFK+HD
Sbjct: 66 GEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDALFKIHD 125
Query: 537 RVVAEDLHSDQDEEGGPQVTAKLLVPSDXXXXXXXXXXXXXXSIRSETGAQIRILKDEHL 716
RVVAEDLHSDQ+EEGGPQV AKLLVPSD ++RSETGAQIRILKD+H+
Sbjct: 126 RVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHV 185
Query: 717 PACALSSDELVQISGDAAVVKKALHQIASRLHDNPSRSQHLLTSAVPAVYPAGGSLMGPT 896
PACAL SDELVQISGDAAVVKKALHQIASRLH NPSR+QHLL SAVP+VYP+GGSLMGPT
Sbjct: 186 PACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPT 245
Query: 897 AGAPIVGIAPLVXXXXXXXXXXXXW-PRSLYSAPRDE-TSSKEFSVRLVCPTXXXXXXXX 1070
AG PIVG+APLV W PRS+YSAPRDE +SSKEFSVRLVCPT
Sbjct: 246 AGPPIVGMAPLVGPYGGYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPTGNLGGVIG 305
Query: 1071 XXXXXXXXXRQDSGATIKVDSSATEGDDCLIIISTKEFFEETFSPTIEAAVRLQPRCSEK 1250
RQDSGATIKVDSSA +GDDCLI ISTKEFFEETFSPT+EAAV LQPRCSEK
Sbjct: 306 KGGGIINQIRQDSGATIKVDSSA-KGDDCLITISTKEFFEETFSPTVEAAVLLQPRCSEK 364
Query: 1251 VERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRILSKENLPKIASEDDE 1430
ERDSGIISFTTRLLVS+SRIGCLIGKGGSIITEMRRLTK+NIRILSKENLPKIAS+DDE
Sbjct: 365 SERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDE 424
Query: 1431 MVQISGDLDVAKDALVHVLTRLRANLFDREGAVSTFLPVLPYLPVSADGPDGLSYDSRDG 1610
MVQISGDLDVAKDALV VLTRLRANLFDREGAV FLPVLPY+P DGPD L+Y+SRDG
Sbjct: 425 MVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLNYESRDG 484
Query: 1611 KXXXXXXXXXXXXXXXNDLAAGDPY 1685
K +DL D Y
Sbjct: 485 KRHGRGHSYSSGYGGSSDLGPVDTY 509
>ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein
[Medicago truncatula]
Length = 553
Score = 719 bits (1856), Expect = 0.0
Identities = 379/505 (75%), Positives = 414/505 (81%), Gaps = 5/505 (0%)
Frame = +3
Query: 186 QRSSYGKRPHSQSDHDRGGNKRRNVGD---DREQFVIDSEDTVYRYLCPGRKIGSVIGRG 356
+RS+YGKRP SQSD+D GGNKRRN GD DREQFVI+ EDTV+RYLCPGRKIGS+IGRG
Sbjct: 6 ERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGSIIGRG 65
Query: 357 GEIVKQLRVETKSKIRIGETVPGYEERVVTIYSPSDETNTLEDGGRYVSPAQEALFKVHD 536
GEIVKQLRVETK+KIRIGETVPG +ERVVT+YS SDETNT++DG + VSPA++ALFK+HD
Sbjct: 66 GEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDALFKIHD 125
Query: 537 RVVAEDLHSDQDEEGGPQVTAKLLVPSDXXXXXXXXXXXXXXSIRSETGAQIRILKDEHL 716
RVVAEDLHSDQ+EEGGPQV AKLLVPSD ++RSETGAQIRILKD+H+
Sbjct: 126 RVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHV 185
Query: 717 PACALSSDELVQISGDAAVVKKALHQIASRLHDNPSRSQHLLTSAVPAVYPAGGSLMGPT 896
PACAL SDELVQISGDAAVVKKALHQIASRLH NPSR+QHLL SAVP+VYP+GGSLMGPT
Sbjct: 186 PACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPT 245
Query: 897 AGAPIVGIAPLVXXXXXXXXXXXXW-PRSLYSAPRDE-TSSKEFSVRLVCPTXXXXXXXX 1070
AG PIVG+APLV W PRS+YSAPRDE +SSKEFSVRLVCPT
Sbjct: 246 AGPPIVGMAPLVGPYGGYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPTGNLGGVIG 305
Query: 1071 XXXXXXXXXRQDSGATIKVDSSATEGDDCLIIISTKEFFEETFSPTIEAAVRLQPRCSEK 1250
RQDSGATIKVDSSA +GDDCLI ISTKEFFEETFSPT+EAAV LQPRCSEK
Sbjct: 306 KGGGIINQIRQDSGATIKVDSSA-KGDDCLITISTKEFFEETFSPTVEAAVLLQPRCSEK 364
Query: 1251 VERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRILSKENLPKIASEDDE 1430
ERDSGIISFTTRLLVS+SRIGCLIGKGGSIITEMRRLTK+NIRILSKENLPKIAS+DDE
Sbjct: 365 SERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDE 424
Query: 1431 MVQISGDLDVAKDALVHVLTRLRANLFDREGAVSTFLPVLPYLPVSADGPDGLSYDSRDG 1610
MVQISGDLDVAKDALV VLTRLRANLFDREGAV FLPVLPY+P DGPD L+Y+SRDG
Sbjct: 425 MVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLNYESRDG 484
Query: 1611 KXXXXXXXXXXXXXXXNDLAAGDPY 1685
K +DL D Y
Sbjct: 485 KRHGRGHSYSSGYGGSSDLGPVDTY 509
>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product
[Vitis vinifera]
Length = 548
Score = 693 bits (1789), Expect = 0.0
Identities = 360/505 (71%), Positives = 401/505 (79%), Gaps = 2/505 (0%)
Frame = +3
Query: 177 MTGQRSSYGKRPHSQSDH-DRGGNKRRNVGDDREQFVIDSEDTVYRYLCPGRKIGSVIGR 353
M GQR+SYGKR HSQSD+ D GGNKRRN GDDR+ F I+ EDTVYRYLCPGRKIGS+IGR
Sbjct: 1 MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60
Query: 354 GGEIVKQLRVETKSKIRIGETVPGYEERVVTIYSPSDETNTLEDGGRYVSPAQEALFKVH 533
GGEIVKQLRV+TKSKIRIGETVPG EERVVTIYS SDETN +D +VSPAQ+ALF+VH
Sbjct: 61 GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120
Query: 534 DRVVAEDLHSDQDEEGGPQVTAKLLVPSDXXXXXXXXXXXXXXSIRSETGAQIRILKDEH 713
DRVV+E++H + EE QVT +LLVPSD SIRSE+GAQ+RILKD+H
Sbjct: 121 DRVVSEEVHGEDSEEAS-QVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDH 179
Query: 714 LPACALSSDELVQISGDAAVVKKALHQIASRLHDNPSRSQHLLTSAVPAVYPAGGSLMGP 893
LP+CALSSDELVQISG+ ++V+KAL+QIASRLHDNPSRSQHLL SAVP Y +GGSLMGP
Sbjct: 180 LPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGP 239
Query: 894 TAGAPIVGIAPLVXXXXXXXXXXXXWPRSLYSAPRDETSSKEFSVRLVCPTXXXXXXXXX 1073
T+GAPI+G+APLV W RSLYSAPRDE SSKEFS+RLVCP
Sbjct: 240 TSGAPIMGLAPLVGTYGGYRGDSGDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIGK 299
Query: 1074 XXXXXXXXRQDSGATIKVDS-SATEGDDCLIIISTKEFFEETFSPTIEAAVRLQPRCSEK 1250
RQ+SGA IKVDS SA E DDCLI IS KEFFE+TFSPTIEAAVRLQPRCSEK
Sbjct: 300 GGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEK 359
Query: 1251 VERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRILSKENLPKIASEDDE 1430
VERDSGI+SFTTRLLV TSRIGCLIGKGG+IITEMR+LTKANIRILSKENLPK+ASEDDE
Sbjct: 360 VERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDE 419
Query: 1431 MVQISGDLDVAKDALVHVLTRLRANLFDREGAVSTFLPVLPYLPVSADGPDGLSYDSRDG 1610
MVQI+GDLDVAKDAL+ V TRLRANLFDREGAVS F+PVLPYLP++ADG DGL YD RD
Sbjct: 420 MVQIAGDLDVAKDALIQVTTRLRANLFDREGAVSAFVPVLPYLPMAADGSDGLKYDGRDN 479
Query: 1611 KXXXXXXXXXXXXXXXNDLAAGDPY 1685
K +DLAA D Y
Sbjct: 480 KRHGRGPSYSGGYGGSSDLAAADAY 504