BLASTX nr result

ID: Glycyrrhiza23_contig00005224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005224
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37495.1| unknown [Lotus japonicus]                              612   e-173
ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Gly...   608   e-172
ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi...   528   e-147
ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ...   510   e-142

>gb|AFK37495.1| unknown [Lotus japonicus]
          Length = 357

 Score =  612 bits (1578), Expect = e-173
 Identities = 301/344 (87%), Positives = 324/344 (94%)
 Frame = +3

Query: 84   VWCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGN 263
            VWCRETVPKV K+VCST L L+HT+LVSLLLVSP LHRTL+S QPLWQSL FRE+NNAGN
Sbjct: 15   VWCRETVPKVFKLVCST-LPLAHTDLVSLLLVSPSLHRTLVSCQPLWQSLIFREVNNAGN 73

Query: 264  RLIAALSLPRYRYVKHINLEFARDVEDTHFILIKDKCFDSVRSLESLNLNGCQKISDTGI 443
            RL+AALSLPRYRYVK I+LEFAR VEDTH ILIKDKCFDS++SLESLNLNGCQKISDTGI
Sbjct: 74   RLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGI 133

Query: 444  EAITSCCPQLKTFSIYWNVRVTDTGLLHTVKNCKHIVDLNISGCKNISDRGIQLVAENYL 623
            EAITSCCPQLKTFSIYWNVRVTDT LLHTV+NCKHIVDLNISGCK I+D+GIQ VAENY 
Sbjct: 134  EAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYP 193

Query: 624  ELESLNLTRCIKLTDDGLKQLLHKCLSLQSLNLYALSSLTDEAYRKISLLTHLKFLDLCG 803
            ELESLNLTRCIK+TDDGLK LLH+CLSLQSLNLYALSS TD AYR+ISLLT LKFLDLCG
Sbjct: 194  ELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCG 253

Query: 804  AQNLSDRGLHCISECKNLVSLNLTWCVRVTDEGVIAIAQNCTSLEFLSLFGIIGVTDKCL 983
            AQNLSD+GLHCIS+CK+LVSLNLTWCVRVTDEGVIA+AQ CTSLEFLSLFGI+GVTDKCL
Sbjct: 254  AQNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQCCTSLEFLSLFGIVGVTDKCL 313

Query: 984  EALSKSCSNKITTLDVNGCVGMKKRSREELLQLFPYLKCFKVHS 1115
            EALSKSCS+KIT LDVNGC+G+KKRSREELLQL PYLKCFKVHS
Sbjct: 314  EALSKSCSDKITILDVNGCIGIKKRSREELLQLLPYLKCFKVHS 357


>ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Glycine max]
          Length = 353

 Score =  608 bits (1568), Expect = e-172
 Identities = 303/345 (87%), Positives = 317/345 (91%), Gaps = 1/345 (0%)
 Frame = +3

Query: 84   VWCRETVPKVLKIVCSTC-LSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAG 260
            VWCRETVPKVLK+VCST  LSLSHT LVSLLLVSP LHRTLL SQPLWQSLNFRELNNAG
Sbjct: 9    VWCRETVPKVLKLVCSTLPLSLSHTNLVSLLLVSPSLHRTLLCSQPLWQSLNFRELNNAG 68

Query: 261  NRLIAALSLPRYRYVKHINLEFARDVEDTHFILIKDKCFDSVRSLESLNLNGCQKISDTG 440
            NRLIAALSLPRY  VK INLEFARDVED H ILI DKCF+S++SLESLNLNGCQKISDTG
Sbjct: 69   NRLIAALSLPRYCNVKQINLEFARDVEDAHLILIMDKCFNSLQSLESLNLNGCQKISDTG 128

Query: 441  IEAITSCCPQLKTFSIYWNVRVTDTGLLHTVKNCKHIVDLNISGCKNISDRGIQLVAENY 620
            IEAITSCCPQLK+FSIYWNVRVTD GL H VKNCKHI+DLNISGCKNISD+G QLVA+NY
Sbjct: 129  IEAITSCCPQLKSFSIYWNVRVTDRGLQHIVKNCKHIIDLNISGCKNISDQGAQLVADNY 188

Query: 621  LELESLNLTRCIKLTDDGLKQLLHKCLSLQSLNLYALSSLTDEAYRKISLLTHLKFLDLC 800
             ELESLNLTRCIKLTDDGLK LLHKCL LQSLNLYALSS TDEAYRKI LL  LKFLDLC
Sbjct: 189  PELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNLYALSSFTDEAYRKICLLARLKFLDLC 248

Query: 801  GAQNLSDRGLHCISECKNLVSLNLTWCVRVTDEGVIAIAQNCTSLEFLSLFGIIGVTDKC 980
            GAQNLSD  L CIS+CKNL SLNLTWCVRVTDEGVI+IA+ CTSLEFLSLFGI+GVTDKC
Sbjct: 249  GAQNLSDEALSCISKCKNLESLNLTWCVRVTDEGVISIAKGCTSLEFLSLFGIVGVTDKC 308

Query: 981  LEALSKSCSNKITTLDVNGCVGMKKRSREELLQLFPYLKCFKVHS 1115
            LE LSKSCSNKITTLDVNGC+G+KKRSREELLQLFPYLKCFKVHS
Sbjct: 309  LEELSKSCSNKITTLDVNGCIGIKKRSREELLQLFPYLKCFKVHS 353


>ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera]
          Length = 353

 Score =  528 bits (1360), Expect = e-147
 Identities = 258/343 (75%), Positives = 298/343 (86%)
 Frame = +3

Query: 87   WCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGNR 266
            W RET+PKVL+IV +    L   +L+SLLLVSP++HRTL+S   LW  L+FRE NNAGNR
Sbjct: 14   WSRETIPKVLRIVGTR---LPQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRETNNAGNR 70

Query: 267  LIAALSLPRYRYVKHINLEFARDVEDTHFILIKDKCFDSVRSLESLNLNGCQKISDTGIE 446
            L+AALSL RY++VK INLEFA+D+ED H  L+K KC DS++ LESLNLN CQKISD G+E
Sbjct: 71   LVAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTKCLDSLQELESLNLNVCQKISDRGVE 130

Query: 447  AITSCCPQLKTFSIYWNVRVTDTGLLHTVKNCKHIVDLNISGCKNISDRGIQLVAENYLE 626
             ITS CP+LK FSIYWNVRVTD G+ H VKNCKHIVDLN+SGCKNI+D+ +QL+A+NY +
Sbjct: 131  TITSACPKLKVFSIYWNVRVTDIGMTHLVKNCKHIVDLNLSGCKNITDKSLQLIADNYPD 190

Query: 627  LESLNLTRCIKLTDDGLKQLLHKCLSLQSLNLYALSSLTDEAYRKISLLTHLKFLDLCGA 806
            LE LNLTRCIKLTD GL+Q+L KC SLQSLNLYALSS TDEAY+KISLLT L+FLDLCGA
Sbjct: 191  LELLNLTRCIKLTDGGLQQILLKCSSLQSLNLYALSSFTDEAYKKISLLTDLRFLDLCGA 250

Query: 807  QNLSDRGLHCISECKNLVSLNLTWCVRVTDEGVIAIAQNCTSLEFLSLFGIIGVTDKCLE 986
            QNLSD+GL CI++CKNLVSLNLTWCVRVTD GVIAIAQ CTSLEFLSLFGI+GVTDKCLE
Sbjct: 251  QNLSDQGLCCIAKCKNLVSLNLTWCVRVTDVGVIAIAQGCTSLEFLSLFGIVGVTDKCLE 310

Query: 987  ALSKSCSNKITTLDVNGCVGMKKRSREELLQLFPYLKCFKVHS 1115
            ALS+SCSN ITTLDVNGC+G+K RSR+ELLQ FPYL+CFKVHS
Sbjct: 311  ALSRSCSNMITTLDVNGCIGIKGRSRDELLQYFPYLRCFKVHS 353


>ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|222854326|gb|EEE91873.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  516 bits (1329), Expect = e-144
 Identities = 250/343 (72%), Positives = 295/343 (86%)
 Frame = +3

Query: 87   WCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGNR 266
            W  ET+PKV+KIV +    L   +L+SLLLVSP+L+RTL S  PLW +L+FRE+N AG+R
Sbjct: 2    WNTETIPKVMKIVST---KLPQRDLISLLLVSPWLYRTLTSFPPLWMALDFREMNKAGDR 58

Query: 267  LIAALSLPRYRYVKHINLEFARDVEDTHFILIKDKCFDSVRSLESLNLNGCQKISDTGIE 446
            LIAA SLPRY++VK INLEFA+D+ED H  +++ KCF S++ LESLNLNGCQKISD GIE
Sbjct: 59   LIAATSLPRYQHVKEINLEFAQDIEDEHLEVLQSKCFVSLQKLESLNLNGCQKISDKGIE 118

Query: 447  AITSCCPQLKTFSIYWNVRVTDTGLLHTVKNCKHIVDLNISGCKNISDRGIQLVAENYLE 626
            AITS C +LK FSIYWNVRVTD G+ H V+NCK IVDLN+SGCKNISD+ +QL+AENY E
Sbjct: 119  AITSTCSKLKVFSIYWNVRVTDIGIKHVVENCKQIVDLNLSGCKNISDKALQLIAENYQE 178

Query: 627  LESLNLTRCIKLTDDGLKQLLHKCLSLQSLNLYALSSLTDEAYRKISLLTHLKFLDLCGA 806
            LESLNLTRCIKLTD GL+Q+L KC SLQSLNLYALSS TD+AY+KIS L+ LKFLDLCGA
Sbjct: 179  LESLNLTRCIKLTDGGLQQILSKCSSLQSLNLYALSSFTDKAYKKISSLSLLKFLDLCGA 238

Query: 807  QNLSDRGLHCISECKNLVSLNLTWCVRVTDEGVIAIAQNCTSLEFLSLFGIIGVTDKCLE 986
            QNLSD GL CI++CKN+VSLNLTWCVRVTD G +AIA+ CTSLEFLSLFGI+GVTDKCLE
Sbjct: 239  QNLSDEGLSCIAKCKNIVSLNLTWCVRVTDVGAVAIAEGCTSLEFLSLFGIVGVTDKCLE 298

Query: 987  ALSKSCSNKITTLDVNGCVGMKKRSREELLQLFPYLKCFKVHS 1115
             LS+ CSN +TTLDVNGC+G+K+RSR+ELLQLFP L+CFKVHS
Sbjct: 299  VLSRFCSNTVTTLDVNGCIGIKRRSRDELLQLFPRLRCFKVHS 341


>ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 351

 Score =  510 bits (1314), Expect = e-142
 Identities = 246/343 (71%), Positives = 296/343 (86%)
 Frame = +3

Query: 87   WCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGNR 266
            W RET+PKV+KIV +T   +S  +++SLLLVSP+LH +L+S   LW +L+FRE+N AG+R
Sbjct: 12   WSRETIPKVMKIVSTT---ISQKDVISLLLVSPWLHHSLISYPSLWLALDFREMNKAGDR 68

Query: 267  LIAALSLPRYRYVKHINLEFARDVEDTHFILIKDKCFDSVRSLESLNLNGCQKISDTGIE 446
            LI+ALSLPRYR+VK INLEFA+D+ED H  +I+ K   S+++LESLNLNGCQKISD GIE
Sbjct: 69   LISALSLPRYRHVKQINLEFAQDIEDRHLQVIQSKASSSLQNLESLNLNGCQKISDKGIE 128

Query: 447  AITSCCPQLKTFSIYWNVRVTDTGLLHTVKNCKHIVDLNISGCKNISDRGIQLVAENYLE 626
            AITS CP LK FSIYWNVRVTD G+   V+NCKHIVDLN+SGCKNISD+ +QLVA+ Y +
Sbjct: 129  AITSACPNLKVFSIYWNVRVTDVGIKQLVENCKHIVDLNLSGCKNISDKSLQLVADLYQD 188

Query: 627  LESLNLTRCIKLTDDGLKQLLHKCLSLQSLNLYALSSLTDEAYRKISLLTHLKFLDLCGA 806
            +E L+LTRCIKLTDDGL+Q+L KC SL+SLNLYALS+ TD+AYR IS L HL+ LDLCGA
Sbjct: 189  IELLDLTRCIKLTDDGLQQILSKCSSLKSLNLYALSTFTDKAYRNISNLAHLRILDLCGA 248

Query: 807  QNLSDRGLHCISECKNLVSLNLTWCVRVTDEGVIAIAQNCTSLEFLSLFGIIGVTDKCLE 986
            QNLSD GL CI++CKNL SLNLTWCVRVT+ GVIAIA+ CT LEFLSLFGI+GVTDKCLE
Sbjct: 249  QNLSDEGLSCIAKCKNLTSLNLTWCVRVTNAGVIAIAEGCTYLEFLSLFGIVGVTDKCLE 308

Query: 987  ALSKSCSNKITTLDVNGCVGMKKRSREELLQLFPYLKCFKVHS 1115
            ALS+SCSN ITTLDVNGC+G+K+RSR+ELLQLFP+L+CFKVHS
Sbjct: 309  ALSRSCSNTITTLDVNGCIGIKRRSRDELLQLFPHLRCFKVHS 351


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