BLASTX nr result
ID: Glycyrrhiza23_contig00005167
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00005167
(1955 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 356 1e-95
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 254 1e-72
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp.... 156 1e-37
ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [... 130 4e-29
ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [... 130 4e-29
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 356 bits (913), Expect = 1e-95
Identities = 172/173 (99%), Positives = 172/173 (99%)
Frame = +3
Query: 1434 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 1613
YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG
Sbjct: 935 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994
Query: 1614 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1793
RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF
Sbjct: 995 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054
Query: 1794 ATLFSTVPTSWARQATFTLGASFPSAQLPENNVRLACVKHIASVPSEPGSNRS 1952
ATLFSTVPTSWARQATFTLGASFPSAQLPENNVRLACVKHIASVPSEPGSN S
Sbjct: 1055 ATLFSTVPTSWARQATFTLGASFPSAQLPENNVRLACVKHIASVPSEPGSNSS 1107
Score = 282 bits (721), Expect(3) = 3e-77
Identities = 165/275 (60%), Positives = 175/275 (63%)
Frame = +3
Query: 423 FVSEPFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVVTRKRRPKTGLY*TSEKTFYLVKQ 602
F S FWRGVLNPLRTTPPGGSPECRVFLRRQLDVV+T KR T +
Sbjct: 706 FRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCKRSKATSKGLSCA-------- 757
Query: 603 QARD*AARNFIYLRRFAHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWQLVALA 782
FAHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCW ++ A
Sbjct: 758 ---------------FAHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSA 802
Query: 783 RNSAPRLTSVAKTFSLGACLSNTKRGFRSL*DLTKHLTTRADDSHAAPV*KSVPSR*GLV 962
S L S A L + ++ L L + D+ V
Sbjct: 803 GAS---LGSSAHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDTRQ-------------V 846
Query: 963 LLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*ST*TKGE 1142
LFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTP+ TKGE
Sbjct: 847 FLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPE--------------TKGE 892
Query: 1143 HSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 1247
HSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF
Sbjct: 893 HSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 927
Score = 31.2 bits (69), Expect(3) = 3e-77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 218 FMFPSCREQSELRQSFRIRSALQP 289
F F + +RQSFRIRSALQP
Sbjct: 674 FAFSKSKVSKSMRQSFRIRSALQP 697
Score = 25.4 bits (54), Expect(3) = 3e-77
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 403 VRHAPFSLFRSR 438
+RHAPF LFRSR
Sbjct: 698 LRHAPFCLFRSR 709
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 230 bits (587), Expect(2) = 1e-72
Identities = 119/140 (85%), Positives = 120/140 (85%)
Frame = -2
Query: 1945 FDPGSEGTLAICLTHASRTLFSGSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNL 1766
FDPGSEGTLAICLTHASRTLFSGSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNL
Sbjct: 84 FDPGSEGTLAICLTHASRTLFSGSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNL 143
Query: 1765 PNSSGQILKKAKKRCXXXXXXXXXXXXXXLTKPMMLSWSFRMISHTGTETRPGLPRGAAV 1586
PNSSGQILKKAKK LTKPMMLSWSFRMISHTGTETRPGLPRGAAV
Sbjct: 144 PNSSGQILKKAKK----------------LTKPMMLSWSFRMISHTGTETRPGLPRGAAV 187
Query: 1585 GNLGQWAKARSSNIA*VKKG 1526
GNLGQWAKARSSNI + G
Sbjct: 188 GNLGQWAKARSSNICAIMTG 207
Score = 71.6 bits (174), Expect(2) = 1e-72
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -1
Query: 1496 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 1395
CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 235
Score = 254 bits (649), Expect = 6e-65
Identities = 117/121 (96%), Positives = 119/121 (98%)
Frame = -3
Query: 447 PAKTAPKQTKRCMPHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERI 268
P +TAPKQTKRCMPHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERI
Sbjct: 391 PKQTAPKQTKRCMPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERI 450
Query: 267 RKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHDF 88
RKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSI PMITHDF
Sbjct: 451 RKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIRPMITHDF 510
Query: 87 C 85
C
Sbjct: 511 C 511
Score = 221 bits (563), Expect(3) = 1e-59
Identities = 118/154 (76%), Positives = 119/154 (77%)
Frame = -2
Query: 1255 GTPKAKAALWVPTDAGVRKHGERTGLDTLVVHAVNDECSPLVYVDQGPS*RVKHSAWGVR 1076
GTPKAKAALWVPTDAGVRKH ERTGLDTLVVHAVNDECSPLVYVDQGP
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP------------ 287
Query: 1075 SQDRNSKELTGACTSGGACGLIRYNAQNLTSP*HMNNKTSP*RDGTDFHTGAAWLSSARV 896
+RNSKELTGACTSGGACGLIRYNAQNLTS AAWLSSARV
Sbjct: 288 --NRNSKELTGACTSGGACGLIRYNAQNLTS--------------------AAWLSSARV 325
Query: 895 VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 794
VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG
Sbjct: 326 VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 359
Score = 33.9 bits (76), Expect(3) = 1e-59
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = -1
Query: 545 SLAGDDDVELAAEKDSAFRRAARWCGT*WV*YAPPKRLRNKLKGACRTH 399
S+ DDDVELAAEKDS YAPPK+ K C H
Sbjct: 372 SIPCDDDVELAAEKDS---------------YAPPKQTAPKQTKRCMPH 405
Score = 24.3 bits (51), Expect(3) = 1e-59
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 675 LASKKTDARTSAS 637
LASKKTDART +S
Sbjct: 360 LASKKTDARTRSS 372
>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
gi|40795104|gb|AAR91148.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 111
Score = 156 bits (394), Expect(2) = 1e-37
Identities = 73/84 (86%), Positives = 76/84 (90%), Gaps = 3/84 (3%)
Frame = -3
Query: 459 GLVRPAKT---APKQTKRCMPHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ 289
G+VR + APKQ KRC+PHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGN NGKQ
Sbjct: 28 GVVRSGNSTRPAPKQRKRCVPHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQ 87
Query: 288 GCKAERIRKDCLSSDCSLQLGNMK 217
GCKAERIRKDCLSSDCSLQLGNMK
Sbjct: 88 GCKAERIRKDCLSSDCSLQLGNMK 111
Score = 28.9 bits (63), Expect(2) = 1e-37
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 490 GEPPGGVVRSGFST 449
G+PPGGVVRSG ST
Sbjct: 23 GQPPGGVVRSGNST 36
>ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [Rhodospirillum
photometricum DSM 122] gi|378401450|emb|CCG06566.1|
Putative uncharacterized protein, partial
[Rhodospirillum photometricum DSM 122]
Length = 161
Score = 130 bits (327), Expect(2) = 4e-29
Identities = 64/96 (66%), Positives = 71/96 (73%)
Frame = -3
Query: 405 HSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 226
HS TA + EEGGDDVKS+WPL AG HTCYNG YNG + I K CLSSDC+LQLG
Sbjct: 42 HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 101
Query: 225 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 118
MK ESLVI DQHA VN +PG VHTARHT+G+G R
Sbjct: 102 CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 137
Score = 26.2 bits (56), Expect(2) = 4e-29
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 43 AYHGGVFDWGEVVT 2
A HG V DWGEVVT
Sbjct: 147 AGHGRVSDWGEVVT 160
>ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [Rhodospirillum
photometricum DSM 122] gi|378401470|emb|CCG06586.1|
unnamed protein product, partial [Rhodospirillum
photometricum DSM 122]
Length = 137
Score = 130 bits (327), Expect(2) = 4e-29
Identities = 64/96 (66%), Positives = 71/96 (73%)
Frame = -3
Query: 405 HSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 226
HS TA + EEGGDDVKS+WPL AG HTCYNG YNG + I K CLSSDC+LQLG
Sbjct: 18 HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 77
Query: 225 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 118
MK ESLVI DQHA VN +PG VHTARHT+G+G R
Sbjct: 78 CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 113
Score = 26.2 bits (56), Expect(2) = 4e-29
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 43 AYHGGVFDWGEVVT 2
A HG V DWGEVVT
Sbjct: 123 AGHGRVSDWGEVVT 136