BLASTX nr result

ID: Glycyrrhiza23_contig00005127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005127
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621882.1| Geranylgeranyl transferase type-1 subunit be...   412   e-113
ref|XP_003518650.1| PREDICTED: geranylgeranyl transferase type-1...   407   e-111
gb|AFK46661.1| unknown [Lotus japonicus]                              404   e-110
ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1...   399   e-109
ref|XP_002532295.1| geranylgeranyl transferase type I beta subun...   353   2e-95

>ref|XP_003621882.1| Geranylgeranyl transferase type-1 subunit beta [Medicago
           truncatula] gi|355496897|gb|AES78100.1| Geranylgeranyl
           transferase type-1 subunit beta [Medicago truncatula]
          Length = 520

 Score =  412 bits (1060), Expect = e-113
 Identities = 191/208 (91%), Positives = 204/208 (98%)
 Frame = +2

Query: 5   TSMRNLQQPDGSFMPIHTGGETDLRFVYCAAAICFMLDNWSGMDKEKAKDYILHCQSYDG 184
           +SM+NLQQPDGSFMPIH GGETDLRFVYCAAAICFMLDNW+GMDKEK KDYIL+CQSYDG
Sbjct: 142 SSMKNLQQPDGSFMPIHIGGETDLRFVYCAAAICFMLDNWNGMDKEKVKDYILNCQSYDG 201

Query: 185 GFGLVPGAESHGGATYCAIASLRLMGFIEDNVLSSCALSSLIDVPLLLDWILRRQGTDGG 364
           GFGLVPGAESHGGATYCAIASLRLMG++EDNVLSSC LSSLID+PLLLDWIL+RQGTDGG
Sbjct: 202 GFGLVPGAESHGGATYCAIASLRLMGYVEDNVLSSCNLSSLIDLPLLLDWILQRQGTDGG 261

Query: 365 FQGRPNKSSDTCYAFWIGAVLRILGGCNFVDNKALRGFLLTCQYKYGGFSKFPGEFPDLY 544
           FQGRPNKS+DTCYAFWIG VLRILGGCNFVDNKALRGFLL+CQYKYGGFSKFPG+FPDLY
Sbjct: 262 FQGRPNKSTDTCYAFWIGGVLRILGGCNFVDNKALRGFLLSCQYKYGGFSKFPGDFPDLY 321

Query: 545 HTYYGFAAFSLLEESGLKSLCSELGITD 628
           H+YYGFAAFSLLEESGLKSLCSELGIT+
Sbjct: 322 HSYYGFAAFSLLEESGLKSLCSELGITN 349


>ref|XP_003518650.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 355

 Score =  407 bits (1047), Expect = e-111
 Identities = 192/209 (91%), Positives = 201/209 (96%)
 Frame = +2

Query: 2   LTSMRNLQQPDGSFMPIHTGGETDLRFVYCAAAICFMLDNWSGMDKEKAKDYILHCQSYD 181
           +TSMRNLQQPDGSF+PIHTGGETDLRFVYCAAAICFMLDNWSGMDKEK KDYIL CQSYD
Sbjct: 141 VTSMRNLQQPDGSFIPIHTGGETDLRFVYCAAAICFMLDNWSGMDKEKTKDYILRCQSYD 200

Query: 182 GGFGLVPGAESHGGATYCAIASLRLMGFIEDNVLSSCALSSLIDVPLLLDWILRRQGTDG 361
           GGFGLVPGAESHGGATYCA+ASLRLMGFIEDN+LSSCA SSLID PLLLDWIL+RQGTDG
Sbjct: 201 GGFGLVPGAESHGGATYCAMASLRLMGFIEDNILSSCASSSLIDAPLLLDWILQRQGTDG 260

Query: 362 GFQGRPNKSSDTCYAFWIGAVLRILGGCNFVDNKALRGFLLTCQYKYGGFSKFPGEFPDL 541
           GFQGRPNKSSDTCYAFWIGAVLRILGG  FVDNKALRGFLL+CQYKYGGFSKFPGE+PDL
Sbjct: 261 GFQGRPNKSSDTCYAFWIGAVLRILGGFKFVDNKALRGFLLSCQYKYGGFSKFPGEYPDL 320

Query: 542 YHTYYGFAAFSLLEESGLKSLCSELGITD 628
           YH+YYGF AFSLLEESGLKSL SELGIT+
Sbjct: 321 YHSYYGFTAFSLLEESGLKSLFSELGITE 349


>gb|AFK46661.1| unknown [Lotus japonicus]
          Length = 341

 Score =  404 bits (1037), Expect = e-110
 Identities = 190/209 (90%), Positives = 199/209 (95%)
 Frame = +2

Query: 2   LTSMRNLQQPDGSFMPIHTGGETDLRFVYCAAAICFMLDNWSGMDKEKAKDYILHCQSYD 181
           L+SMRNLQQ DGSFMPIHTGGETDLRFVYCAA+ICFMLDNWSGMDKEKAKDYIL CQSYD
Sbjct: 127 LSSMRNLQQSDGSFMPIHTGGETDLRFVYCAASICFMLDNWSGMDKEKAKDYILLCQSYD 186

Query: 182 GGFGLVPGAESHGGATYCAIASLRLMGFIEDNVLSSCALSSLIDVPLLLDWILRRQGTDG 361
           GGFGLVPGAESHGGATYCA+ASLRLMGFIED++LSSC+ SSLIDVPLLLDW L+RQGTDG
Sbjct: 187 GGFGLVPGAESHGGATYCAVASLRLMGFIEDSILSSCSSSSLIDVPLLLDWTLQRQGTDG 246

Query: 362 GFQGRPNKSSDTCYAFWIGAVLRILGGCNFVDNKALRGFLLTCQYKYGGFSKFPGEFPDL 541
           GFQGRPNK SDTCYAFWIGAVLRILGGCNFVD  A+R FLL CQYKYGGFSKFP EFPDL
Sbjct: 247 GFQGRPNKPSDTCYAFWIGAVLRILGGCNFVDKNAVREFLLACQYKYGGFSKFPEEFPDL 306

Query: 542 YHTYYGFAAFSLLEESGLKSLCSELGITD 628
           YHTYYGF+AFSLLEESGLKSLCSELGITD
Sbjct: 307 YHTYYGFSAFSLLEESGLKSLCSELGITD 335


>ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 347

 Score =  399 bits (1024), Expect = e-109
 Identities = 187/207 (90%), Positives = 195/207 (94%)
 Frame = +2

Query: 2   LTSMRNLQQPDGSFMPIHTGGETDLRFVYCAAAICFMLDNWSGMDKEKAKDYILHCQSYD 181
           +TSMRNLQQPDGSF+ IHTGGETDLRFVYCAA ICFMLDNWSGMDKEK KDYIL CQSYD
Sbjct: 140 VTSMRNLQQPDGSFISIHTGGETDLRFVYCAATICFMLDNWSGMDKEKTKDYILRCQSYD 199

Query: 182 GGFGLVPGAESHGGATYCAIASLRLMGFIEDNVLSSCALSSLIDVPLLLDWILRRQGTDG 361
           GGFGLVPGAESHGGATYCAIASLRLMGFI DN+LSSCA SSLID PLLLDWIL+RQGTDG
Sbjct: 200 GGFGLVPGAESHGGATYCAIASLRLMGFIGDNILSSCASSSLIDAPLLLDWILQRQGTDG 259

Query: 362 GFQGRPNKSSDTCYAFWIGAVLRILGGCNFVDNKALRGFLLTCQYKYGGFSKFPGEFPDL 541
           GFQGRPNKSSDTCYAFWIGAVLRILGGC FVD+KALRGFLL+CQYKYGGF KFPGE+PDL
Sbjct: 260 GFQGRPNKSSDTCYAFWIGAVLRILGGCKFVDSKALRGFLLSCQYKYGGFGKFPGEYPDL 319

Query: 542 YHTYYGFAAFSLLEESGLKSLCSELGI 622
           YH+YYG  AFSLLEES LKSLCSELGI
Sbjct: 320 YHSYYGVTAFSLLEESALKSLCSELGI 346


>ref|XP_002532295.1| geranylgeranyl transferase type I beta subunit, putative [Ricinus
           communis] gi|223527997|gb|EEF30079.1| geranylgeranyl
           transferase type I beta subunit, putative [Ricinus
           communis]
          Length = 370

 Score =  353 bits (907), Expect = 2e-95
 Identities = 161/209 (77%), Positives = 185/209 (88%)
 Frame = +2

Query: 2   LTSMRNLQQPDGSFMPIHTGGETDLRFVYCAAAICFMLDNWSGMDKEKAKDYILHCQSYD 181
           LTSMRNLQQPDGSF+PIH G ETDLRF+YCAAAICFML++WSGMDKE+AK+YI+ CQSYD
Sbjct: 156 LTSMRNLQQPDGSFLPIHIGAETDLRFIYCAAAICFMLEDWSGMDKEQAKEYIVRCQSYD 215

Query: 182 GGFGLVPGAESHGGATYCAIASLRLMGFIEDNVLSSCALSSLIDVPLLLDWILRRQGTDG 361
           GGFG+V G+ESHGG T+CA+ASLRLMGFI+D++LS     S+IDVPLLL+W L+RQ  DG
Sbjct: 216 GGFGMVSGSESHGGGTFCAVASLRLMGFIDDDLLSKDEPPSIIDVPLLLEWCLKRQAADG 275

Query: 362 GFQGRPNKSSDTCYAFWIGAVLRILGGCNFVDNKALRGFLLTCQYKYGGFSKFPGEFPDL 541
           GFQGR NK +DTCYAFW+GAVLRILGG  F+D KALRGFL+TCQ KYGGFSKFPGE PD+
Sbjct: 276 GFQGRLNKPTDTCYAFWVGAVLRILGGYKFIDGKALRGFLITCQSKYGGFSKFPGELPDI 335

Query: 542 YHTYYGFAAFSLLEESGLKSLCSELGITD 628
           YH+YYG+ AFSLLEE GL SLC ELGITD
Sbjct: 336 YHSYYGYTAFSLLEEPGLNSLCVELGITD 364


Top