BLASTX nr result

ID: Glycyrrhiza23_contig00005084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005084
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago ...   187   8e-46
ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion chann...   185   4e-45
ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion chann...   165   4e-39
ref|NP_001235853.1| uncharacterized protein LOC100527422 [Glycin...   157   8e-37
ref|XP_003529892.1| PREDICTED: putative cyclic nucleotide-gated ...   154   9e-36

>ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago truncatula]
           gi|355501583|gb|AES82786.1| Cyclic nucleotide-gated
           channel C [Medicago truncatula]
          Length = 718

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/117 (74%), Positives = 98/117 (83%)
 Frame = -1

Query: 410 VGAIWYLLSVESEVRCWSRELKNASIFHESYLACGPSSSIRNPDVLQLLNRTCSLVDPDQ 231
           VGA WYLLSVES+VRCW R + NASIFH+S+L CGP    RN  VL LLN  C+LVDPD+
Sbjct: 272 VGANWYLLSVESQVRCWRRVMNNASIFHDSFLGCGP----RNATVLSLLNGACTLVDPDE 327

Query: 230 INDTNIFNFGIFFDAIQSRVVDSTTDFPQKFFYCFWWGLRNLSSVGQNLKTSTYVVE 60
           IN+T  FNFGIF+DA+QS VVDS TDFPQKFFYCFWWGLRNLSS+GQNLKT+TYV E
Sbjct: 328 INNTTTFNFGIFYDALQSLVVDSNTDFPQKFFYCFWWGLRNLSSLGQNLKTTTYVTE 384


>ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 716

 Score =  185 bits (469), Expect = 4e-45
 Identities = 86/117 (73%), Positives = 98/117 (83%)
 Frame = -1

Query: 410 VGAIWYLLSVESEVRCWSRELKNASIFHESYLACGPSSSIRNPDVLQLLNRTCSLVDPDQ 231
           VGA WY+LSVESE+RCW REL+NAS++H  Y++C      RNP+V  LLNRTCSLVDPD 
Sbjct: 271 VGANWYMLSVESELRCWRRELRNASLYHRKYMSCVD----RNPNVFTLLNRTCSLVDPDT 326

Query: 230 INDTNIFNFGIFFDAIQSRVVDSTTDFPQKFFYCFWWGLRNLSSVGQNLKTSTYVVE 60
           I D N FN+GIFFDA+ SRVV+STTDFPQKFFYCFWWGLRNLSS+GQNLKTST V E
Sbjct: 327 IKDPNTFNYGIFFDALDSRVVESTTDFPQKFFYCFWWGLRNLSSLGQNLKTSTDVSE 383


>ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 728

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 9/126 (7%)
 Frame = -1

Query: 410 VGAIWYLLSVESEVRCWSRELKNASIFHESYLACGPSS-------SIRNPDVLQ--LLNR 258
           VGA WY+LSVESEVRCW RELKNAS+ H  Y++CG  +       ++ N  +L   +LN+
Sbjct: 271 VGANWYMLSVESEVRCW-RELKNASLCHREYMSCGDRNQKNFTLLNLLNQTLLNQTVLNQ 329

Query: 257 TCSLVDPDQINDTNIFNFGIFFDAIQSRVVDSTTDFPQKFFYCFWWGLRNLSSVGQNLKT 78
           TCSLVDPD I D   FNFGIF DA+ S VV+STTDFPQKFFYCFWWGLRNLSS+GQNLKT
Sbjct: 330 TCSLVDPDTIKDPKTFNFGIFSDALDSHVVESTTDFPQKFFYCFWWGLRNLSSLGQNLKT 389

Query: 77  STYVVE 60
           ST V E
Sbjct: 390 STDVSE 395


>ref|NP_001235853.1| uncharacterized protein LOC100527422 [Glycine max]
           gi|255632308|gb|ACU16512.1| unknown [Glycine max]
          Length = 100

 Score =  157 bits (397), Expect = 8e-37
 Identities = 71/102 (69%), Positives = 82/102 (80%)
 Frame = -1

Query: 410 VGAIWYLLSVESEVRCWSRELKNASIFHESYLACGPSSSIRNPDVLQLLNRTCSLVDPDQ 231
           VGA+WY+LS+ESEV CW RELKNAS+FHE YL+CG        +V QLLN+TCS +DPD+
Sbjct: 2   VGAVWYMLSIESEVWCWRRELKNASLFHEEYLSCGHGDQ----NVFQLLNKTCSFIDPDK 57

Query: 230 INDTNIFNFGIFFDAIQSRVVDSTTDFPQKFFYCFWWGLRNL 105
           I D N FNFGIFFDA+ S VV+STTD  QKFFYCFWWGLRNL
Sbjct: 58  IIDKNTFNFGIFFDALDSGVVESTTDLHQKFFYCFWWGLRNL 99


>ref|XP_003529892.1| PREDICTED: putative cyclic nucleotide-gated ion channel 13-like
           [Glycine max]
          Length = 689

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/117 (60%), Positives = 84/117 (71%)
 Frame = -1

Query: 410 VGAIWYLLSVESEVRCWSRELKNASIFHESYLACGPSSSIRNPDVLQLLNRTCSLVDPDQ 231
           VGA WYL SVES +RCW R LKN +  HESYL+CG  +S     V  LL  +C L DP Q
Sbjct: 247 VGAFWYLFSVESRLRCWRRRLKNTTFLHESYLSCGSGNST----VQSLLKSSCPLTDPQQ 302

Query: 230 INDTNIFNFGIFFDAIQSRVVDSTTDFPQKFFYCFWWGLRNLSSVGQNLKTSTYVVE 60
           I     FNFGIF +A+++RVV+S TDFP KFFYCFWWGLR++SSVGQ L+TSTY  E
Sbjct: 303 IQHLETFNFGIFIEALKARVVESNTDFPHKFFYCFWWGLRSVSSVGQGLETSTYAGE 359


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