BLASTX nr result

ID: Glycyrrhiza23_contig00005037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005037
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47240.1| unknown [Medicago truncatula]                          224   3e-67
dbj|BAH78716.1| SLEEPY1a [Lotus japonicus]                            201   7e-60
ref|NP_001238371.1| uncharacterized protein LOC100527591 [Glycin...   186   5e-55
ref|XP_003525914.1| PREDICTED: F-box protein GID2-like [Glycine ...   178   1e-52
ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|2...   153   8e-45

>gb|AFK47240.1| unknown [Medicago truncatula]
          Length = 174

 Score =  224 bits (572), Expect(2) = 3e-67
 Identities = 123/184 (66%), Positives = 127/184 (69%)
 Frame = +3

Query: 159 MKRTLPSSATGEDRKMKRVKGEDDRVDDEVCEKKNPRGLACFDENMLFEVLKHVDARTLA 338
           MKR+L S A  EDRKMKRVK E+    D VCEK   RGLA FDENMLFEVLKHVDARTLA
Sbjct: 1   MKRSLSSEAN-EDRKMKRVKEEESEKIDGVCEKN--RGLASFDENMLFEVLKHVDARTLA 57

Query: 339 MAGCVNKQWHKTAXXXXXXXXXXXXXXXXXXXXXXXQWHKTAQDERLWELICTKQWANTG 518
           M+ CVNKQWH                             KTAQDERLWELICTKQWANTG
Sbjct: 58  MSSCVNKQWH-----------------------------KTAQDERLWELICTKQWANTG 88

Query: 519 CGEQQLRSVVLALGGFRRLHSLYLLPLSKPQTXXXXXXXXXXXWGPISQVIRPKPLPRLG 698
           CGEQQLRSVVLALGGFRRLHSLYLLPLSKPQT           WGPI QVI+ KPLPRLG
Sbjct: 89  CGEQQLRSVVLALGGFRRLHSLYLLPLSKPQTSSSSSCSSSSSWGPIPQVIKSKPLPRLG 148

Query: 699 KDEV 710
           KDEV
Sbjct: 149 KDEV 152



 Score = 58.2 bits (139), Expect(2) = 3e-67
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 764 LGKDEVHLSLSLLSIRYYEKMNFNNRN 844
           LGKDEVHLSLSLLSIRYYEKMNFNNRN
Sbjct: 147 LGKDEVHLSLSLLSIRYYEKMNFNNRN 173


>dbj|BAH78716.1| SLEEPY1a [Lotus japonicus]
          Length = 184

 Score =  201 bits (511), Expect(2) = 7e-60
 Identities = 115/194 (59%), Positives = 126/194 (64%), Gaps = 10/194 (5%)
 Frame = +3

Query: 159 MKRTLPSSATGEDRKMKRVK----GEDDRVDDEVCEKKNPRGLACFDENMLFEVLKHVDA 326
           MKR+LPS   GEDRKMK+VK     +D   +D+VC K +  GL CFD+N+LFEVLKHVDA
Sbjct: 1   MKRSLPS---GEDRKMKKVKLAETDDDGEGEDDVCGKIHGPGLGCFDDNLLFEVLKHVDA 57

Query: 327 RTLAMAGCVNKQWHKTAXXXXXXXXXXXXXXXXXXXXXXXQWHKTAQDERLWELICTKQW 506
           ++LAMAGCVNKQWH                             KTAQDERLWELICTKQW
Sbjct: 58  KSLAMAGCVNKQWH-----------------------------KTAQDERLWELICTKQW 88

Query: 507 ANTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQT-----XXXXXXXXXXXWGPI-SQV 668
           ANTGCGE+QLRSVVLALGGFR LHSL LLPLSK QT                WGPI   V
Sbjct: 89  ANTGCGEKQLRSVVLALGGFRNLHSLCLLPLSKSQTSASSVSSASSSSSSSPWGPIPPPV 148

Query: 669 IRPKPLPRLGKDEV 710
           IR KPLPRLGKDEV
Sbjct: 149 IRSKPLPRLGKDEV 162



 Score = 57.0 bits (136), Expect(2) = 7e-60
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 764 LGKDEVHLSLSLLSIRYYEKMNFNNRNR 847
           LGKDEVHLSLSLLSIRYYEKMNFNNR R
Sbjct: 157 LGKDEVHLSLSLLSIRYYEKMNFNNRPR 184


>ref|NP_001238371.1| uncharacterized protein LOC100527591 [Glycine max]
           gi|255632705|gb|ACU16704.1| unknown [Glycine max]
          Length = 183

 Score =  186 bits (472), Expect(2) = 5e-55
 Identities = 112/193 (58%), Positives = 121/193 (62%), Gaps = 9/193 (4%)
 Frame = +3

Query: 159 MKRTLPSSATG---EDRKMKRVKGEDDRVDDEVCEKKNPRGLACFDENMLFEVLKHVDAR 329
           MKR L  SA+G   EDRKMK+     +  DD     +   GLA FD+N+LFEVLKHVDAR
Sbjct: 1   MKRPLSPSASGVNVEDRKMKKKAKAVENEDDN---GERVEGLAHFDDNLLFEVLKHVDAR 57

Query: 330 TLAMAGCVNKQWHKTAXXXXXXXXXXXXXXXXXXXXXXXQWHKTAQDERLWELICTKQWA 509
           TLAM+GCVNKQWH                             KTAQDERLWELICTKQWA
Sbjct: 58  TLAMSGCVNKQWH-----------------------------KTAQDERLWELICTKQWA 88

Query: 510 NTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQ-----TXXXXXXXXXXXWGP-ISQVI 671
           NTGCGEQQLRSVVLALGGFRRLH+LYL PLSKPQ     +           WGP I QVI
Sbjct: 89  NTGCGEQQLRSVVLALGGFRRLHALYLFPLSKPQQTPSSSSSSTSSSSSSAWGPTIPQVI 148

Query: 672 RPKPLPRLGKDEV 710
           R KPL RLGKDEV
Sbjct: 149 RSKPL-RLGKDEV 160



 Score = 55.8 bits (133), Expect(2) = 5e-55
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 764 LGKDEVHLSLSLLSIRYYEKMNFNNR 841
           LGKDEVHLSLSLLSIRYYEKMNFNNR
Sbjct: 155 LGKDEVHLSLSLLSIRYYEKMNFNNR 180


>ref|XP_003525914.1| PREDICTED: F-box protein GID2-like [Glycine max]
          Length = 174

 Score =  178 bits (451), Expect(2) = 1e-52
 Identities = 106/190 (55%), Positives = 115/190 (60%), Gaps = 6/190 (3%)
 Frame = +3

Query: 159 MKRTLPSSATGEDRKMKRVKGEDDRVDDEVCEKKNPRGLACFDENMLFEVLKHVDARTLA 338
           MKR L  SA+G     K    E+D         ++  GL  FD+N+LFEVLKHVDARTLA
Sbjct: 1   MKRPLTPSASGMKTNKKAKAMEND---------EDVEGLGRFDDNLLFEVLKHVDARTLA 51

Query: 339 MAGCVNKQWHKTAXXXXXXXXXXXXXXXXXXXXXXXQWHKTAQDERLWELICTKQWANTG 518
           MAGCVNKQWH                             KTAQDERLWELICTKQWANTG
Sbjct: 52  MAGCVNKQWH-----------------------------KTAQDERLWELICTKQWANTG 82

Query: 519 CGEQQLRSVVLALGGFRRLHSLYLLPLSKPQ-----TXXXXXXXXXXXWGP-ISQVIRPK 680
           CGEQQLRSVVLALGGFRRLH+LYL PLSKPQ     T           WGP + Q+IR K
Sbjct: 83  CGEQQLRSVVLALGGFRRLHALYLFPLSKPQQLQQLTSSSSSSSSSSAWGPTVPQMIRSK 142

Query: 681 PLPRLGKDEV 710
           PL RLGKDEV
Sbjct: 143 PL-RLGKDEV 151



 Score = 55.8 bits (133), Expect(2) = 1e-52
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 764 LGKDEVHLSLSLLSIRYYEKMNFNNR 841
           LGKDEVHLSLSLLSIRYYEKMNFNNR
Sbjct: 146 LGKDEVHLSLSLLSIRYYEKMNFNNR 171


>ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|222842886|gb|EEE80433.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  153 bits (387), Expect(2) = 8e-45
 Identities = 90/189 (47%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
 Frame = +3

Query: 159 MKRTL---PSSATGEDRKMKRVKGEDDRVDDEVCEKKNP-RGLACFDENMLFEVLKHVDA 326
           MKR L   P +    D KMK+ + ++D   +E+    N   G    DEN+LFEVLKHVDA
Sbjct: 1   MKRPLDTDPGNQNKIDIKMKKKRYQEDENKEEIESAVNTGSGFMNLDENLLFEVLKHVDA 60

Query: 327 RTLAMAGCVNKQWHKTAXXXXXXXXXXXXXXXXXXXXXXXQWHKTAQDERLWELICTKQW 506
           RTL  A CV+KQWH                             +T QDERLWEL+CTK W
Sbjct: 61  RTLGSAACVSKQWH-----------------------------RTVQDERLWELVCTKHW 91

Query: 507 ANTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQT-XXXXXXXXXXXWGPISQVIRPKP 683
            N GCG QQ+RSVVLALGGFRRLHS YL PLSKPQ+            W P S +I  KP
Sbjct: 92  GNMGCGNQQMRSVVLALGGFRRLHSQYLWPLSKPQSNSAGSASTSSSAWNPFSPMIGNKP 151

Query: 684 LPRLGKDEV 710
             R GKDEV
Sbjct: 152 PARWGKDEV 160



 Score = 54.3 bits (129), Expect(2) = 8e-45
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +2

Query: 767 GKDEVHLSLSLLSIRYYEKMNFNNRNR 847
           GKDEVHLSLSLLSIRYYEKMNF+NR R
Sbjct: 156 GKDEVHLSLSLLSIRYYEKMNFSNRGR 182


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