BLASTX nr result

ID: Glycyrrhiza23_contig00005031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005031
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517100.1| PREDICTED: uncharacterized protein LOC100776...   216   3e-54
ref|XP_003612922.1| hypothetical protein MTR_5g030570 [Medicago ...   206   3e-51
ref|XP_002515194.1| LRX2, putative [Ricinus communis] gi|2235456...   181   9e-44
ref|XP_002326722.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002329514.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41

>ref|XP_003517100.1| PREDICTED: uncharacterized protein LOC100776990 [Glycine max]
          Length = 318

 Score =  216 bits (550), Expect = 3e-54
 Identities = 110/164 (67%), Positives = 118/164 (71%)
 Frame = +1

Query: 79  MDNSKNRHDNSLGVNKMGKNIRKSPLHQPNFGNNAAKQQPQPQVYNISKNDFRDIVQQLT 258
           MDNSKNRH++SLGVNK+GKNIRKSPLHQPNF NNAA+QQPQPQVYNISKNDFRDIVQQLT
Sbjct: 1   MDNSKNRHNDSLGVNKLGKNIRKSPLHQPNFANNAARQQPQPQVYNISKNDFRDIVQQLT 60

Query: 259 GSPSQDXXXXXXXXXXXXQSMRLQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNNAL 438
           GSPSQD            QSMRLQ+I                             YNNA+
Sbjct: 61  GSPSQDPPPRPPHNPPKPQSMRLQKI--RPPPLTPINRPRMPPPMPMPAAPPSVPYNNAI 118

Query: 439 PRPAQFGQPSPTPGDIWANTTESPISAYMRYLQNSMMDPGSRGN 570
           PRPAQFGQP   PGDIW+NTTESPISAYMRYLQNS+MDPG RGN
Sbjct: 119 PRPAQFGQPPTPPGDIWSNTTESPISAYMRYLQNSIMDPGQRGN 162


>ref|XP_003612922.1| hypothetical protein MTR_5g030570 [Medicago truncatula]
           gi|355514257|gb|AES95880.1| hypothetical protein
           MTR_5g030570 [Medicago truncatula]
          Length = 321

 Score =  206 bits (524), Expect = 3e-51
 Identities = 113/168 (67%), Positives = 120/168 (71%), Gaps = 4/168 (2%)
 Frame = +1

Query: 79  MDNSKNRHDNSLGVNKMGKNIRKSPLHQPNFGNNAAKQQPQPQVYNISKNDFRDIVQQLT 258
           MDNSKNR ++SLGVNKMGKNIRKSPLHQPNFGNNAA+QQPQPQVYNISKNDFRDIVQQLT
Sbjct: 1   MDNSKNRINDSLGVNKMGKNIRKSPLHQPNFGNNAARQQPQPQVYNISKNDFRDIVQQLT 60

Query: 259 GSPSQD-XXXXXXXXXXXXQSMRLQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNNA 435
           GSPSQ+             QSMRLQ+I                             YNNA
Sbjct: 61  GSPSQEPPPRPPHRPPPKPQSMRLQKI--RPPPLSPINRPRLPPPMPMPAAPPPLPYNNA 118

Query: 436 LPRPAQFGQPSP---TPGDIWANTTESPISAYMRYLQNSMMDPGSRGN 570
            PRPA +GQPSP   TPGD+WANTTESPISAYMRYLQNSMMDPGSRGN
Sbjct: 119 -PRPAHYGQPSPTPLTPGDLWANTTESPISAYMRYLQNSMMDPGSRGN 165


>ref|XP_002515194.1| LRX2, putative [Ricinus communis] gi|223545674|gb|EEF47178.1| LRX2,
           putative [Ricinus communis]
          Length = 321

 Score =  181 bits (459), Expect = 9e-44
 Identities = 102/175 (58%), Positives = 109/175 (62%), Gaps = 11/175 (6%)
 Frame = +1

Query: 79  MDNSKNRHDNS-LGVNKMGKNIRKSPLHQPNFGNNAA---KQQPQPQVYNISKNDFRDIV 246
           MDNSKNR  N  LGVNK+GKNIRKSPLHQPNF NNA    +QQPQPQVYNISKNDFR+IV
Sbjct: 1   MDNSKNRQQNDPLGVNKLGKNIRKSPLHQPNFANNANNANRQQPQPQVYNISKNDFRNIV 60

Query: 247 QQLTGSPSQDXXXXXXXXXXXXQSMRLQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXY 426
           QQLTGSPSQ+            QSMRLQ+I                             +
Sbjct: 61  QQLTGSPSQEPLPRPPQNPPKPQSMRLQKIRPPPLTPINRPHIPPPVPAPAVAPPPPVPF 120

Query: 427 NNALPRPAQFGQPSPT------PGD-IWANTTESPISAYMRYLQNSMMDPGSRGN 570
           NN   RP QFG PSPT      PGD  WANT ESPISAYMRYLQNS+MDP  RGN
Sbjct: 121 NNNFARPGQFGHPSPTMMPPMAPGDSAWANTAESPISAYMRYLQNSIMDPSPRGN 175


>ref|XP_002326722.1| predicted protein [Populus trichocarpa] gi|222834044|gb|EEE72521.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  177 bits (450), Expect = 1e-42
 Identities = 99/176 (56%), Positives = 110/176 (62%), Gaps = 12/176 (6%)
 Frame = +1

Query: 79  MDNSKNRHDNSLGVNKMGKNIRKSPLHQPNFGNNAAKQQPQPQVYNISKNDFRDIVQQLT 258
           MDNSKNR  + LGVNK+GKNI+KSPLHQPNF NN  +QQPQPQVYNISKNDFR+IVQQLT
Sbjct: 1   MDNSKNRQSDHLGVNKIGKNIKKSPLHQPNFANNPNRQQPQPQVYNISKNDFRNIVQQLT 60

Query: 259 GSPSQDXXXXXXXXXXXXQSMRLQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYN--- 429
           GSPSQ+            QSMRLQ+I                             +N   
Sbjct: 61  GSPSQEPLPRPPNNPPKPQSMRLQKIRPPPLTPINRPHVPPPFPAPAVAPPPVPYHNAFV 120

Query: 430 --NALPRPAQFGQPSP------TPGDI-WANTTESPISAYMRYLQNSMMDPGSRGN 570
               LP P+QFG PSP      TPGD  WANT ESPISAYMRYLQNS++DPGS GN
Sbjct: 121 RPGMLPPPSQFGLPSPTMMPPLTPGDSGWANTAESPISAYMRYLQNSIIDPGSWGN 176


>ref|XP_002329514.1| predicted protein [Populus trichocarpa] gi|222870223|gb|EEF07354.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  174 bits (441), Expect = 1e-41
 Identities = 99/177 (55%), Positives = 110/177 (62%), Gaps = 13/177 (7%)
 Frame = +1

Query: 79  MDNSKNRHDNSLGVNKMGKNIRKSPLHQPNFGNNAAKQQPQPQVYNISKNDFRDIVQQLT 258
           MDNSKNR  + LGVNK+GKNI+KSPLHQPNF NN  +QQPQPQVYNISKNDFR+IVQQLT
Sbjct: 1   MDNSKNRQSDHLGVNKIGKNIKKSPLHQPNFANNPNRQQPQPQVYNISKNDFRNIVQQLT 60

Query: 259 GSPSQDXXXXXXXXXXXXQSMRLQRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNNAL 438
           GSPSQ+            QSMRLQ+I                             Y+NA 
Sbjct: 61  GSPSQEPLPRPPQNPPKPQSMRLQKI--RPPPLTPINRPHIPPPVPAPAVAPPVPYHNAF 118

Query: 439 PR------PAQFGQPSPT------PGDI-WANTTESPISAYMRYLQNSMMDPGSRGN 570
            R      P QFG PSPT      PGD  WA+T ESPISAYMRYLQN+M+DPG RGN
Sbjct: 119 VRPGMPHPPGQFGLPSPTMTPPFIPGDSGWASTAESPISAYMRYLQNTMIDPGPRGN 175


Top