BLASTX nr result

ID: Glycyrrhiza23_contig00005002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00005002
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   355   e-143
ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncat...   338   e-137
ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago tr...   333   e-135
dbj|BAE71224.1| putative replication protein A1 [Trifolium prate...   329   e-134
ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   330   e-133

>ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
           max]
          Length = 439

 Score =  355 bits (912), Expect(2) = e-143
 Identities = 180/188 (95%), Positives = 183/188 (97%)
 Frame = +3

Query: 15  MGEENNETKTFKDLGLSEQLVEACGKLGWQNPLKIQVEAIPLALEGKDVIGLAQTGSGKT 194
           MGEEN ETKTFKDLGLSE LVEAC KLGW+NPLKIQ EAIPLALEGKDVIGLAQTGSGKT
Sbjct: 1   MGEENEETKTFKDLGLSESLVEACEKLGWKNPLKIQTEAIPLALEGKDVIGLAQTGSGKT 60

Query: 195 GAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 374
           GAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV
Sbjct: 61  GAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 120

Query: 375 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLGRLKYLVLDEADRLLNEDFEESLNEILQ 554
           QQSIKIAKQPHIIVGTPGRV+DHLK+TKGFSL RLKYLVLDEADRLLNEDFEESLNEILQ
Sbjct: 121 QQSIKIAKQPHIIVGTPGRVIDHLKHTKGFSLSRLKYLVLDEADRLLNEDFEESLNEILQ 180

Query: 555 MIPRERRT 578
           MIPRERRT
Sbjct: 181 MIPRERRT 188



 Score =  181 bits (459), Expect(2) = e-143
 Identities = 92/116 (79%), Positives = 95/116 (81%)
 Frame = +2

Query: 677  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 856
            FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM
Sbjct: 189  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 248

Query: 857  AGSTSMVFXXXXXXXXXXXXXXXXXXXXXIPINGHMTQSKRLGALNKFKSGDCNVL 1024
            AGSTSMVF                     IPINGHM+QSKRLGALNKFKSG+CN+L
Sbjct: 249  AGSTSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQSKRLGALNKFKSGECNIL 304


>ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 502

 Score =  338 bits (866), Expect(2) = e-137
 Identities = 170/191 (89%), Positives = 179/191 (93%)
 Frame = +3

Query: 6   KLRMGEENNETKTFKDLGLSEQLVEACGKLGWQNPLKIQVEAIPLALEGKDVIGLAQTGS 185
           KLRM EEN E K+FKDLGL E LVEAC K+GW+NPLKIQ+EAIP ALEGKD+IGLA+TGS
Sbjct: 62  KLRMEEENKEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGS 121

Query: 186 GKTGAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGI 365
           GKTGAFALPILHALLEAPRP  FFACV+SPTRELAIQI+EQFEALGSEIGVKCAVLVGGI
Sbjct: 122 GKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGI 181

Query: 366 DMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLGRLKYLVLDEADRLLNEDFEESLNE 545
           DMVQQS+KIAK PHIIVGTPGRVLDHLKNTKGFSL RLKYLVLDEADRLLNEDFEESLNE
Sbjct: 182 DMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNE 241

Query: 546 ILQMIPRERRT 578
           IL MIPRERRT
Sbjct: 242 ILGMIPRERRT 252



 Score =  178 bits (451), Expect(2) = e-137
 Identities = 90/116 (77%), Positives = 93/116 (80%)
 Frame = +2

Query: 677  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 856
            FLFSATMTKKV+KLQRVCLRNPVKIE SSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM
Sbjct: 253  FLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 312

Query: 857  AGSTSMVFXXXXXXXXXXXXXXXXXXXXXIPINGHMTQSKRLGALNKFKSGDCNVL 1024
            AGSTSMVF                     IPINGHM+Q KRLGALNKFKSGDCN+L
Sbjct: 313  AGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNIL 368


>ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
            gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase
            dbp9 [Medicago truncatula]
          Length = 1155

 Score =  333 bits (854), Expect(2) = e-135
 Identities = 168/191 (87%), Positives = 178/191 (93%)
 Frame = +3

Query: 6    KLRMGEENNETKTFKDLGLSEQLVEACGKLGWQNPLKIQVEAIPLALEGKDVIGLAQTGS 185
            KLRM EEN E K+FKDLGL E LVEAC K+GW+ PL+IQ+EAIP ALEGKD+IGLA+TGS
Sbjct: 715  KLRMEEENKEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGS 774

Query: 186  GKTGAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGI 365
            GKTGAFALPILHALLEAPRP  FFACV+SPTRELAIQI+EQFEALGSEIGVKCAVLVGGI
Sbjct: 775  GKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGI 834

Query: 366  DMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLGRLKYLVLDEADRLLNEDFEESLNE 545
            DMVQQS+KIAK PHIIVGTPGRVLDHLKNTKGFSL RLKYLVLDEADRLLNEDFEESLNE
Sbjct: 835  DMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNE 894

Query: 546  ILQMIPRERRT 578
            IL MIPRERRT
Sbjct: 895  ILGMIPRERRT 905



 Score =  174 bits (442), Expect(2) = e-135
 Identities = 88/116 (75%), Positives = 92/116 (79%)
 Frame = +2

Query: 677  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 856
            FLFSATMT KV+KLQRVCLRNPVKIE SSKYSTVDTLKQQYRFLPAKHKDCYLVYIL+EM
Sbjct: 906  FLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEM 965

Query: 857  AGSTSMVFXXXXXXXXXXXXXXXXXXXXXIPINGHMTQSKRLGALNKFKSGDCNVL 1024
            AGSTSMVF                     IPINGHM+Q KRLGALNKFKSGDCN+L
Sbjct: 966  AGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNIL 1021


>dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
          Length = 440

 Score =  329 bits (844), Expect(2) = e-134
 Identities = 167/188 (88%), Positives = 175/188 (93%)
 Frame = +3

Query: 15  MGEENNETKTFKDLGLSEQLVEACGKLGWQNPLKIQVEAIPLALEGKDVIGLAQTGSGKT 194
           M EENNE K+FKDLGL E+LVEAC  LGW+ PLKIQ+EAIPLAL+GKDVIGLAQTGSGKT
Sbjct: 1   MEEENNEMKSFKDLGLPEELVEACDNLGWKTPLKIQIEAIPLALQGKDVIGLAQTGSGKT 60

Query: 195 GAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 374
           GAFALPILHALL+APRP  FFACVLSPTRELAIQI+EQFEALGS IGVK AVLVGGIDMV
Sbjct: 61  GAFALPILHALLQAPRPNHFFACVLSPTRELAIQISEQFEALGSGIGVKSAVLVGGIDMV 120

Query: 375 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLGRLKYLVLDEADRLLNEDFEESLNEILQ 554
           QQSIKIAK PHIIVGTPGRVLDHLKNTKGFSL +LKYLVLDEADRLLNEDFEESLNEIL 
Sbjct: 121 QQSIKIAKHPHIIVGTPGRVLDHLKNTKGFSLSKLKYLVLDEADRLLNEDFEESLNEILG 180

Query: 555 MIPRERRT 578
           MIPRERRT
Sbjct: 181 MIPRERRT 188



 Score =  175 bits (444), Expect(2) = e-134
 Identities = 89/116 (76%), Positives = 93/116 (80%)
 Frame = +2

Query: 677  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 856
            FLFSATMTKKV+KLQRVCLRNPVKIEAS+KYSTVDTLKQQYRFLPAK KDCYLVYILTEM
Sbjct: 189  FLFSATMTKKVEKLQRVCLRNPVKIEASTKYSTVDTLKQQYRFLPAKRKDCYLVYILTEM 248

Query: 857  AGSTSMVFXXXXXXXXXXXXXXXXXXXXXIPINGHMTQSKRLGALNKFKSGDCNVL 1024
            AGSTSMVF                     IPINGHM+Q KRLGALNKFKSGDCN+L
Sbjct: 249  AGSTSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNIL 304


>ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           10-like [Glycine max]
          Length = 438

 Score =  330 bits (846), Expect(2) = e-133
 Identities = 168/188 (89%), Positives = 174/188 (92%)
 Frame = +3

Query: 15  MGEENNETKTFKDLGLSEQLVEACGKLGWQNPLKIQVEAIPLALEGKDVIGLAQTGSGKT 194
           MGEEN   KTF+DLG SE LVEAC KLGW++PLKI  EAIP+ALEGKDV GLAQTG GKT
Sbjct: 1   MGEENEGIKTFRDLGFSESLVEACEKLGWKSPLKIXTEAIPIALEGKDVTGLAQTGYGKT 60

Query: 195 GAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 374
           GAFALPILHALLEAPRPK FF CVLSPTRELAIQIAEQFEALGS IGVKCAVLVGGIDMV
Sbjct: 61  GAFALPILHALLEAPRPKHFFDCVLSPTRELAIQIAEQFEALGSXIGVKCAVLVGGIDMV 120

Query: 375 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLGRLKYLVLDEADRLLNEDFEESLNEILQ 554
           QQSIKIAKQPHIIVGTP RVLDHLK+TKGFSLGRLKYLVLDEADRLLNEDFEESLNEILQ
Sbjct: 121 QQSIKIAKQPHIIVGTPRRVLDHLKHTKGFSLGRLKYLVLDEADRLLNEDFEESLNEILQ 180

Query: 555 MIPRERRT 578
           MIPRER+T
Sbjct: 181 MIPRERKT 188



 Score =  173 bits (439), Expect(2) = e-133
 Identities = 88/116 (75%), Positives = 92/116 (79%)
 Frame = +2

Query: 677  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 856
            FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQY FLPAKHKDCY VYILTEM
Sbjct: 189  FLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYLFLPAKHKDCYFVYILTEM 248

Query: 857  AGSTSMVFXXXXXXXXXXXXXXXXXXXXXIPINGHMTQSKRLGALNKFKSGDCNVL 1024
            +GSTSMVF                     IPINGHM+QSKRLGA NKFKSG+CN+L
Sbjct: 249  SGSTSMVFTCTCDATRLLALILRNLGLKAIPINGHMSQSKRLGASNKFKSGECNIL 304


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