BLASTX nr result

ID: Glycyrrhiza23_contig00004958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004958
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604926.1| 2-oxoisovalerate dehydrogenase subunit beta ...   672   0.0  
gb|AFK44061.1| unknown [Medicago truncatula]                          670   0.0  
ref|NP_001239825.1| uncharacterized protein LOC100802853 [Glycin...   645   0.0  
ref|XP_003520965.1| PREDICTED: 2-oxoisovalerate dehydrogenase su...   642   0.0  
ref|XP_002304849.1| predicted protein [Populus trichocarpa] gi|2...   629   e-178

>ref|XP_003604926.1| 2-oxoisovalerate dehydrogenase subunit beta [Medicago truncatula]
            gi|355505981|gb|AES87123.1| 2-oxoisovalerate
            dehydrogenase subunit beta [Medicago truncatula]
          Length = 358

 Score =  672 bits (1735), Expect = 0.0
 Identities = 334/366 (91%), Positives = 348/366 (95%)
 Frame = -3

Query: 1111 MSTCVKRLGRRSVVSLVSTTTRGISNTTSSSCIHKDAAAEEGVKSLNLYSAINQALHIAL 932
            MS CVKRLG+   VSLVS   RG+S    +S + KDAAAE GVKSLNLYSA+NQALHIAL
Sbjct: 1    MSPCVKRLGKW--VSLVSR--RGLS----TSIVQKDAAAENGVKSLNLYSAVNQALHIAL 52

Query: 931  DSDPRAYVFGEDVSFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIA 752
            D+DPRAYVFGEDV FGGVFRCTTGLADRFGK RVFNTPLCEQGIVGFGIGLAAMGNRAIA
Sbjct: 53   DTDPRAYVFGEDVGFGGVFRCTTGLADRFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIA 112

Query: 751  EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFC 572
            EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFC
Sbjct: 113  EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFC 172

Query: 571  HVPGIKVVIPRSPREAKGLLLSCIRDPNPVVFFEPKWLYRLAVEEVPEDDYVLPLSEAEV 392
            HVPGIKVVIPRSP+EAKGLLLSCIRDPNP+VFFEPKWLYRLAVEEVPE DY+LPLSEAEV
Sbjct: 173  HVPGIKVVIPRSPKEAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEGDYMLPLSEAEV 232

Query: 391  IRQGCDITLIGWGAQLSVMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLL 212
            IR+G DITL+GWGAQLS+MEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLL
Sbjct: 233  IREGSDITLVGWGAQLSIMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLL 292

Query: 211  ISHEAPVTGGFGAEISASILERCFSRLEAPIARVCGLDTPFPLVFEPFYMPTKNKILDAI 32
            ISHEAPVTGGFGAEISASILERCFSRLEAP+ARVCGLDTPFPLVFEPFYMPTKNKILDAI
Sbjct: 293  ISHEAPVTGGFGAEISASILERCFSRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAI 352

Query: 31   KSTVNY 14
            KSTV+Y
Sbjct: 353  KSTVSY 358


>gb|AFK44061.1| unknown [Medicago truncatula]
          Length = 358

 Score =  670 bits (1729), Expect = 0.0
 Identities = 333/366 (90%), Positives = 347/366 (94%)
 Frame = -3

Query: 1111 MSTCVKRLGRRSVVSLVSTTTRGISNTTSSSCIHKDAAAEEGVKSLNLYSAINQALHIAL 932
            MS CVKRLG+   VSLVS   RG+S    +S + KDAAAE GVKSLNLYSA+NQALHIAL
Sbjct: 1    MSPCVKRLGKW--VSLVSR--RGLS----TSIVQKDAAAENGVKSLNLYSAVNQALHIAL 52

Query: 931  DSDPRAYVFGEDVSFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIA 752
            D+DPRAYVFGEDV FGGVFRCTTGLADRFGK RVFNTPLCEQGIVGFGIGLAAMGNRAIA
Sbjct: 53   DTDPRAYVFGEDVGFGGVFRCTTGLADRFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIA 112

Query: 751  EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFC 572
            EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFC
Sbjct: 113  EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFC 172

Query: 571  HVPGIKVVIPRSPREAKGLLLSCIRDPNPVVFFEPKWLYRLAVEEVPEDDYVLPLSEAEV 392
            HVPGIKVVIPRSP+EAKGLLLSCIRDPNP+VFFEPKWLYRLAVEEVPE DY+LPLSEAEV
Sbjct: 173  HVPGIKVVIPRSPKEAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEGDYMLPLSEAEV 232

Query: 391  IRQGCDITLIGWGAQLSVMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLL 212
            IR+G DITL+GWGAQLS+MEQACVDAEKEGISCELIDLK LIPWDKETVEASVKKTGRLL
Sbjct: 233  IREGSDITLVGWGAQLSIMEQACVDAEKEGISCELIDLKILIPWDKETVEASVKKTGRLL 292

Query: 211  ISHEAPVTGGFGAEISASILERCFSRLEAPIARVCGLDTPFPLVFEPFYMPTKNKILDAI 32
            ISHEAPVTGGFGAEISASILERCFSRLEAP+ARVCGLDTPFPLVFEPFYMPTKNKILDAI
Sbjct: 293  ISHEAPVTGGFGAEISASILERCFSRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAI 352

Query: 31   KSTVNY 14
            KSTV+Y
Sbjct: 353  KSTVSY 358


>ref|NP_001239825.1| uncharacterized protein LOC100802853 [Glycine max]
            gi|255641168|gb|ACU20861.1| unknown [Glycine max]
          Length = 356

 Score =  645 bits (1663), Expect = 0.0
 Identities = 310/345 (89%), Positives = 330/345 (95%)
 Frame = -3

Query: 1048 RGISNTTSSSCIHKDAAAEEGVKSLNLYSAINQALHIALDSDPRAYVFGEDVSFGGVFRC 869
            RG S +TS     +   +EEG+KSLNL SAINQALHIALD+DPR+YVFGEDVSFGGVFRC
Sbjct: 16   RGFSTSTSI----QKGGSEEGLKSLNLCSAINQALHIALDTDPRSYVFGEDVSFGGVFRC 71

Query: 868  TTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAK 689
            TTGLAD+FGK RVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAK
Sbjct: 72   TTGLADQFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAK 131

Query: 688  FRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLL 509
            FRYRSGNQFNCGGLT+R PYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLL
Sbjct: 132  FRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLL 191

Query: 508  SCIRDPNPVVFFEPKWLYRLAVEEVPEDDYVLPLSEAEVIRQGCDITLIGWGAQLSVMEQ 329
            SC+RDPNP+VFFEPKWLYRLAVEEVPEDDY+LPLSEAEVIRQG DITL+GWGAQLS+MEQ
Sbjct: 192  SCVRDPNPIVFFEPKWLYRLAVEEVPEDDYMLPLSEAEVIRQGSDITLVGWGAQLSIMEQ 251

Query: 328  ACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLLISHEAPVTGGFGAEISASILE 149
            AC+DAEKEGISCELIDLKTLIPWDKETVEASV KTGRLL+SHEAP+TGGFGAEISASI+E
Sbjct: 252  ACLDAEKEGISCELIDLKTLIPWDKETVEASVNKTGRLLVSHEAPITGGFGAEISASIVE 311

Query: 148  RCFSRLEAPIARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 14
            RCFSRLEAP+AR+CGLDTPFPLVFEPFYMP+KNKILDAIKSTVNY
Sbjct: 312  RCFSRLEAPVARICGLDTPFPLVFEPFYMPSKNKILDAIKSTVNY 356


>ref|XP_003520965.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta,
            mitochondrial-like [Glycine max]
          Length = 358

 Score =  642 bits (1656), Expect = 0.0
 Identities = 310/345 (89%), Positives = 329/345 (95%)
 Frame = -3

Query: 1048 RGISNTTSSSCIHKDAAAEEGVKSLNLYSAINQALHIALDSDPRAYVFGEDVSFGGVFRC 869
            RG S  TS+S       +EEG+KSLNL SAINQALHIALDSDPR+YVFGEDVSFGGVFRC
Sbjct: 16   RGFS--TSTSVQKGGGGSEEGLKSLNLCSAINQALHIALDSDPRSYVFGEDVSFGGVFRC 73

Query: 868  TTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAK 689
            TTGLAD+FGK RVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAK
Sbjct: 74   TTGLADQFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAK 133

Query: 688  FRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLL 509
            FRYRSGNQFNCGGLT+R PYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPR+AKGLLL
Sbjct: 134  FRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPRQAKGLLL 193

Query: 508  SCIRDPNPVVFFEPKWLYRLAVEEVPEDDYVLPLSEAEVIRQGCDITLIGWGAQLSVMEQ 329
            SCIRDPNPVVFFEPKWLYRLAVEEVPEDDY+LPLSEAEVIRQG D+TL+GWGAQL++MEQ
Sbjct: 194  SCIRDPNPVVFFEPKWLYRLAVEEVPEDDYMLPLSEAEVIRQGSDVTLVGWGAQLAIMEQ 253

Query: 328  ACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLLISHEAPVTGGFGAEISASILE 149
            AC+DAEKEGISCELIDLKTLIPWDKETVE+SV KTGRLL+SHEAP+TGGFGAEISASI+E
Sbjct: 254  ACLDAEKEGISCELIDLKTLIPWDKETVESSVNKTGRLLVSHEAPITGGFGAEISASIVE 313

Query: 148  RCFSRLEAPIARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 14
            RCFSRLEAP+AR+CGLDTPFPLVFEPFYMPTKNKILDAIKSTV Y
Sbjct: 314  RCFSRLEAPVARICGLDTPFPLVFEPFYMPTKNKILDAIKSTVKY 358


>ref|XP_002304849.1| predicted protein [Populus trichocarpa] gi|222842281|gb|EEE79828.1|
            predicted protein [Populus trichocarpa]
          Length = 368

 Score =  629 bits (1621), Expect = e-178
 Identities = 308/368 (83%), Positives = 336/368 (91%), Gaps = 2/368 (0%)
 Frame = -3

Query: 1111 MSTCVKRLGRRSVVSLVSTTTRGISNTTSSSCI--HKDAAAEEGVKSLNLYSAINQALHI 938
            M+T ++R GRR V S+ +   R  S T   + +   +    +E  KSLNL SAINQALHI
Sbjct: 3    MATSLRRCGRRLVSSVFNN--REFSTTCQGNKVIQQQHEQLQETGKSLNLCSAINQALHI 60

Query: 937  ALDSDPRAYVFGEDVSFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRA 758
            AL++DPR+YVFGEDVSFGGVFRCTTGLA++FGK RVFNTPLCEQGIVGFGIGLAAM NRA
Sbjct: 61   ALETDPRSYVFGEDVSFGGVFRCTTGLAEKFGKKRVFNTPLCEQGIVGFGIGLAAMDNRA 120

Query: 757  IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAF 578
            IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAF
Sbjct: 121  IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAF 180

Query: 577  FCHVPGIKVVIPRSPREAKGLLLSCIRDPNPVVFFEPKWLYRLAVEEVPEDDYVLPLSEA 398
            FCHVPGIKVV+PRSPREAKGLLLSCIRD NPV+FFEPKWLYRLAVEEVPE DY+LPLSEA
Sbjct: 181  FCHVPGIKVVVPRSPREAKGLLLSCIRDTNPVIFFEPKWLYRLAVEEVPEHDYMLPLSEA 240

Query: 397  EVIRQGCDITLIGWGAQLSVMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGR 218
            EVIR+G DITL+GWGAQLS+MEQAC DAEKEGISCELIDLKTLIPWDKETVEASV+KTG+
Sbjct: 241  EVIREGSDITLVGWGAQLSIMEQACFDAEKEGISCELIDLKTLIPWDKETVEASVRKTGK 300

Query: 217  LLISHEAPVTGGFGAEISASILERCFSRLEAPIARVCGLDTPFPLVFEPFYMPTKNKILD 38
            LLISHEAPVTGGFGAEISASI+ERCF RLEAP+AR+CGLDTPFPLVFEPFY+PTKNKI+D
Sbjct: 301  LLISHEAPVTGGFGAEISASIVERCFLRLEAPVARICGLDTPFPLVFEPFYVPTKNKIVD 360

Query: 37   AIKSTVNY 14
            AIK+TVNY
Sbjct: 361  AIKATVNY 368


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