BLASTX nr result
ID: Glycyrrhiza23_contig00004902
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00004902
(1841 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [... 962 0.0
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1... 944 0.0
ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [... 923 0.0
ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncat... 903 0.0
ref|XP_002517473.1| structure-specific recognition protein, puta... 890 0.0
>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 640
Score = 962 bits (2488), Expect = 0.0
Identities = 486/585 (83%), Positives = 506/585 (86%)
Frame = +1
Query: 85 MTDGHLFNNITLGGRGGINPGQLKIYSGGILWKRQGGGKLIEVDKADIMGVTWMKVPRTN 264
MTDGHLFNNITLGGRGG NPGQ+KIY GGI+WKRQGGGKLIEVDK+DIMGVTWMKVPR+N
Sbjct: 1 MTDGHLFNNITLGGRGGTNPGQIKIYPGGIIWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60
Query: 265 QLGVQIRDGLYYKFTGFRDQDVVSLTNFFQNTFGVTVEEKQLSVSGRTWGEVDLNGNMLA 444
QLGVQI+DGLYYKFTGFRDQDVVSLTNFFQNT G++VEEKQLSVSGR WGEVDLNGNMLA
Sbjct: 61 QLGVQIKDGLYYKFTGFRDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120
Query: 445 FMVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLMEISFHIPSSNTQFV 624
F VGSKQAFEVSLADVSQTQLQGKNDV LEFHVDDTTGANEKDSLMEISFHIP+SNTQFV
Sbjct: 121 FTVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 625 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 804
GDENRPPAQVFRDKIMSMADVGAGGEDA+VTFEGIAILTPRGRY+VELH+SFLRLQGQAN
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 240
Query: 805 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVQSELAIN 984
DFKIQYSSVVRLFLLPKSNQPHTFV+ISLDPPIRKGQTLYPHIVMQFETDYVV+SELAIN
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAIN 300
Query: 985 DDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 1164
+DLYN+KYKDKL+LSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLYNTKYKDKLDLSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 1165 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 1344
ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420
Query: 1345 RNEYHNLYGFISSKGLKIMNLGDAQPTVGVAKVLENDDDDAVDPHLERIKNEAGGXXXXX 1524
RNEYHNLY FISSKGLKI+NLGDAQPTVG+ KVLENDDDDAVDPHLERIKNEAGG
Sbjct: 421 RNEYHNLYEFISSKGLKILNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGGDESDE 480
Query: 1525 XXXXFVADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLXXXXXXXXXXXXXXX 1704
FVADK DL
Sbjct: 481 EDSDFVADKDDEGSPTDDSGADDSDATDSGDEKEKPAKKESKKDL-PSKASTSKKKSKDD 539
Query: 1705 XXXXXXXXXXXXXPNAPKRAMSGFMFFSQMERENLKKTNPGISFT 1839
PNAPKRAMSGFMFFS++ERENLKKTNPGISFT
Sbjct: 540 EDGKKRKQKKRKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFT 584
>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia
faba var. minor]
Length = 642
Score = 944 bits (2441), Expect = 0.0
Identities = 480/586 (81%), Positives = 496/586 (84%), Gaps = 1/586 (0%)
Frame = +1
Query: 85 MTDGHLFNNITLGGRGGINPGQLKIYSGGILWKRQGGGKLIEVDKADIMGVTWMKVPRTN 264
MTDGHLFNNITLG RGG NPGQ+KIYSGGILWKRQGGGK I+VDK DIMGVTWMKVP+TN
Sbjct: 1 MTDGHLFNNITLGXRGGTNPGQIKIYSGGILWKRQGGGKTIDVDKTDIMGVTWMKVPKTN 60
Query: 265 QLGVQIRDGLYYKFTGFRDQDVVSLTNFFQNTFGVTVEEKQLSVSGRTWGEVDLNGNMLA 444
QLGVQI+DGL YKFTGFRDQDVVSLTNFFQNTFG+TVEEKQLSV+GR WGEVDLNGNMLA
Sbjct: 61 QLGVQIKDGLLYKFTGFRDQDVVSLTNFFQNTFGITVEEKQLSVTGRNWGEVDLNGNMLA 120
Query: 445 FMVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLMEISFHIPSSNTQFV 624
FMVGSKQAFEVSLADVSQT LQGKNDV LEFHVDDTTGANEKDSLME+SFHIPSSNTQFV
Sbjct: 121 FMVGSKQAFEVSLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNTQFV 180
Query: 625 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 804
GDENRP AQVFRDKIMSMADVG GGEDAVVTF+GIAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPSAQVFRDKIMSMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 805 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVQSELAIN 984
DFKIQYSSVVRLFLLPKSNQPHTFV+ISLDPPIRKGQTLYPHIVMQFETD VV SELAI+
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDTVVDSELAIS 300
Query: 985 DDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 1164
+DLYNSKYKDKLELSYKGLIHEVFTT+LRGLSG KVTKPG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLYNSKYKDKLELSYKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDG 360
Query: 1165 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 1344
ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420
Query: 1345 RNEYHNLYGFISSKGLKIMNLGDAQPTV-GVAKVLENDDDDAVDPHLERIKNEAGGXXXX 1521
RNEYHNLYGFISSKGLKIMN+ DAQ V GVAKVLENDDDDAVDPHLERI+NEAGG
Sbjct: 421 RNEYHNLYGFISSKGLKIMNIADAQQAVGGVAKVLENDDDDAVDPHLERIRNEAGGDESD 480
Query: 1522 XXXXXFVADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLXXXXXXXXXXXXXX 1701
FV DK DL
Sbjct: 481 EEDSDFVIDKDDGGSPTDDSGADVSDASQSGGETEKPAKKEPKKDLSSKASSSKKKSKDA 540
Query: 1702 XXXXXXXXXXXXXXPNAPKRAMSGFMFFSQMERENLKKTNPGISFT 1839
PNAPKRA+SGFMFFSQMERENLKKTNPGISFT
Sbjct: 541 DVDGVKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKTNPGISFT 586
>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 923 bits (2386), Expect = 0.0
Identities = 454/489 (92%), Positives = 472/489 (96%)
Frame = +1
Query: 85 MTDGHLFNNITLGGRGGINPGQLKIYSGGILWKRQGGGKLIEVDKADIMGVTWMKVPRTN 264
MTDGHLFNNITLGGRGG NPGQ+KIY GGI+WKRQGGGKLIEVDK+DIMGVTWMKVPR+N
Sbjct: 1 MTDGHLFNNITLGGRGGTNPGQIKIYPGGIVWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60
Query: 265 QLGVQIRDGLYYKFTGFRDQDVVSLTNFFQNTFGVTVEEKQLSVSGRTWGEVDLNGNMLA 444
QLGVQI+DGLYYKFTGFRDQDVV+LTNFFQNT G++VEEKQLSVSGR WGEVDLNGNMLA
Sbjct: 61 QLGVQIKDGLYYKFTGFRDQDVVTLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120
Query: 445 FMVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLMEISFHIPSSNTQFV 624
FMVGSKQAFEVSLADVSQTQLQGKNDV LEFHVDDTTGANEKDSLMEISFHIP+SNTQFV
Sbjct: 121 FMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 625 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 804
GDENRPPAQVFRDKIMSMADVGAGGEDA+VTFEGIAILTPRGRY+VELH+SFLRLQGQAN
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 240
Query: 805 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVQSELAIN 984
DFKIQYSSVVRLFLLPKSNQPHTFV+ISLDPPIRKGQTLYPHIVMQFETDYVV+SELAIN
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAIN 300
Query: 985 DDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 1164
+DLYN+K+KDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLYNTKFKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 1165 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 1344
ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420
Query: 1345 RNEYHNLYGFISSKGLKIMNLGDAQPTVGVAKVLENDDDDAVDPHLERIKNEAGGXXXXX 1524
RNEYHNLY FISSKGLKIMNLGDAQPTVG+ KVLENDDDDAVDPHLERIKNEAG
Sbjct: 421 RNEYHNLYEFISSKGLKIMNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGEDESDE 480
Query: 1525 XXXXFVADK 1551
FVADK
Sbjct: 481 EDSDFVADK 489
Score = 66.6 bits (161), Expect = 2e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1744 PNAPKRAMSGFMFFSQMERENLKKTNPGISFT 1839
PNAPKRAMSGFMFFS++ERENLKKTNPGISFT
Sbjct: 527 PNAPKRAMSGFMFFSKLERENLKKTNPGISFT 558
>ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1
[Medicago truncatula]
Length = 648
Score = 903 bits (2333), Expect = 0.0
Identities = 443/489 (90%), Positives = 468/489 (95%)
Frame = +1
Query: 85 MTDGHLFNNITLGGRGGINPGQLKIYSGGILWKRQGGGKLIEVDKADIMGVTWMKVPRTN 264
MTDGHLFNNITLGGRGG NPGQ+KIYSGGILWKRQGGGK IEVDK+DI+ VTWMKVP++N
Sbjct: 1 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKSDIVSVTWMKVPKSN 60
Query: 265 QLGVQIRDGLYYKFTGFRDQDVVSLTNFFQNTFGVTVEEKQLSVSGRTWGEVDLNGNMLA 444
QLGVQI+DGL+YKFTGFRDQDVVSLT+FFQNTFG+TV+EKQLSVSGR WGEVDLNGNMLA
Sbjct: 61 QLGVQIKDGLFYKFTGFRDQDVVSLTSFFQNTFGITVKEKQLSVSGRNWGEVDLNGNMLA 120
Query: 445 FMVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLMEISFHIPSSNTQFV 624
FMVGSKQAFEV LADVSQT LQGKNDV LEFHVDDTTGANEKDSLMEISFHIP+SNTQFV
Sbjct: 121 FMVGSKQAFEVPLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 625 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 804
GDEN PPAQVFRDKI+S+ADVGAGGEDAVVTF+GIAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENCPPAQVFRDKIISVADVGAGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 805 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVQSELAIN 984
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVV+SELA++
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVESELALS 300
Query: 985 DDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 1164
+DLYNSK+KD+LELSYKGLIHEVFTT+LRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLYNSKFKDRLELSYKGLIHEVFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 1165 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 1344
ILYPLEKSFFFLPKPPTLI HEEIDYVEFERHAAGGSNMHYFDLLIRLKS+QEHLFRNIQ
Sbjct: 361 ILYPLEKSFFFLPKPPTLITHEEIDYVEFERHAAGGSNMHYFDLLIRLKSDQEHLFRNIQ 420
Query: 1345 RNEYHNLYGFISSKGLKIMNLGDAQPTVGVAKVLENDDDDAVDPHLERIKNEAGGXXXXX 1524
RNEYHNLYGFISSKGLKIMNLGDAQPT GVAKVLE DDDDAVDPHLERI+NEAG
Sbjct: 421 RNEYHNLYGFISSKGLKIMNLGDAQPTTGVAKVLEGDDDDAVDPHLERIRNEAGEDESDE 480
Query: 1525 XXXXFVADK 1551
FVA+K
Sbjct: 481 EDEDFVAEK 489
Score = 65.1 bits (157), Expect = 6e-08
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +1
Query: 1744 PNAPKRAMSGFMFFSQMERENLKKTNPGISFT 1839
PNAPKR MSGFMFFSQMEREN+KK NPGISFT
Sbjct: 560 PNAPKRGMSGFMFFSQMERENIKKANPGISFT 591
>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific
recognition protein, putative [Ricinus communis]
Length = 640
Score = 890 bits (2299), Expect = 0.0
Identities = 445/584 (76%), Positives = 486/584 (83%)
Frame = +1
Query: 85 MTDGHLFNNITLGGRGGINPGQLKIYSGGILWKRQGGGKLIEVDKADIMGVTWMKVPRTN 264
MTDGHLFNNI+LGGRGG NPGQLK++SGGILWK+QGGGK +EVDKADI G+TWMKVPRTN
Sbjct: 1 MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGLTWMKVPRTN 60
Query: 265 QLGVQIRDGLYYKFTGFRDQDVVSLTNFFQNTFGVTVEEKQLSVSGRTWGEVDLNGNMLA 444
QLGV+I+DGL+YKFTGFRDQD +LT+FFQ+ G+T+EEKQLSVSGR WGEVDLNGNML
Sbjct: 61 QLGVRIKDGLFYKFTGFRDQDHANLTSFFQSNCGITLEEKQLSVSGRNWGEVDLNGNMLT 120
Query: 445 FMVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLMEISFHIPSSNTQFV 624
F+VGSKQAFEVSLADVSQTQ+QGKNDV LEFHVDDTTGANEKDSLMEISFHIPS+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNTQFV 180
Query: 625 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 804
GDEN PPAQVFRDKIMSMADV GGE+AVVTF+G+AILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENHPPAQVFRDKIMSMADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 805 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVQSELAIN 984
DFKIQYSSVVRLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+QF+TD+VVQS L +N
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFDTDFVVQSTLTMN 300
Query: 985 DDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 1164
+DL ++KYKDKLE SYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLLSTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 1165 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 1344
+LYPLEKSFFFLPKPPTLILHEEIDYVEFERHA G SNMHYFDLLIRLK+EQEHLFRNIQ
Sbjct: 361 LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHATGSSNMHYFDLLIRLKTEQEHLFRNIQ 420
Query: 1345 RNEYHNLYGFISSKGLKIMNLGDAQPTVGVAKVLENDDDDAVDPHLERIKNEAGGXXXXX 1524
RNEYHNL+ FIS KGLKIMNLGD + T GVA VL+NDDDDAVDPHLERIKNEA G
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDMKTTNGVAAVLQNDDDDAVDPHLERIKNEA-GDESDE 479
Query: 1525 XXXXFVADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLXXXXXXXXXXXXXXX 1704
FVADK +
Sbjct: 480 EDSDFVADKDDGGSPTDDSGEEDSDGSLSGDGTEKHVRKESTKEPSSSKAAPKKRSKDGN 539
Query: 1705 XXXXXXXXXXXXXPNAPKRAMSGFMFFSQMERENLKKTNPGISF 1836
PNAPK+AMSGFMFFSQMEREN+KK+NPGI+F
Sbjct: 540 DDGKKKKQKKKKDPNAPKKAMSGFMFFSQMERENVKKSNPGIAF 583