BLASTX nr result

ID: Glycyrrhiza23_contig00004891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004891
         (2520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541668.1| PREDICTED: transcription factor TCP2-like [G...   263   1e-67
ref|XP_002271548.1| PREDICTED: transcription factor TCP2-like [V...   191   6e-46
ref|XP_003547199.1| PREDICTED: transcription factor TCP2-like [G...   189   2e-45
ref|XP_002519642.1| conserved hypothetical protein [Ricinus comm...   172   4e-40
gb|AET97663.1| TCP transcription factor [Camellia sinensis]           170   2e-39

>ref|XP_003541668.1| PREDICTED: transcription factor TCP2-like [Glycine max]
          Length = 532

 Score =  263 bits (673), Expect = 1e-67
 Identities = 198/505 (39%), Positives = 232/505 (45%), Gaps = 23/505 (4%)
 Frame = +1

Query: 499  MEEDEIQAQVCKFPRVGNG------SRNEEEDGEVGLXXXXXXXXXXXXXXXXXXX---F 651
            MEEDEIQA  CKFPRVGNG         EEE G++ L                       
Sbjct: 1    MEEDEIQA--CKFPRVGNGRSSDQYQEEEEEGGDLRLRKGVGVGGGGGGGGSDASTNHFH 58

Query: 652  XXXXXXXXXXXXXXXXXGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPS 831
                             GGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPS
Sbjct: 59   QSSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPS 118

Query: 832  KAVEWLIKSASDAIAELPSLNNTFPDTPKQPSDEKRASVGTTTNEQGFDSADAEMDGGEN 1011
            KAVEWLIK+AS+AI+ELPSLNN FPDTPKQ SD+KR + G    +Q       +   G+ 
Sbjct: 119  KAVEWLIKAASEAISELPSLNNPFPDTPKQLSDKKRPTSGGGQQQQQIQQGHFDDADGDT 178

Query: 1012 NNYHHQQQNXXXXXXXXXXXXXXXXXXXXXXXRSDIRANRF----XXXXXXXXXXXXXXX 1179
            +   +Q QN                       RS+IR NR                    
Sbjct: 179  SYPQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKEKE 238

Query: 1180 XXXXXNNESHNNIAHHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1359
                   ES ++IAHH+                                           
Sbjct: 239  KEKEKEKESESSIAHHHHHHHVNNNNHMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTT 298

Query: 1360 XXXXXXXXXXXXXXXXHPTSSPRGGSVQETARQQWSS--APMDYFSSGLLXXXXXXXXXX 1533
                            H T+    G  Q+  +  WS    PMDYFS+GLL          
Sbjct: 299  TSPNGSSVHQIHDGHDHETNLFNKGR-QQQQQHHWSQTVTPMDYFSTGLLVGPSSSSART 357

Query: 1534 XXXXXXXXXXQMIQLGHSHNSLADHHHQAIMSMSSVSPFSCNTGENQSCSDQMQQHFSFI 1713
                            H H S + H          +SPFS   GEN S   +  QHFSF+
Sbjct: 358  QQ--------------HQHQSSSAHFQLGHAHALPISPFS---GENHS---EQLQHFSFM 397

Query: 1714 PDHLMPAP----VVTSSSHQQPSGNDYNL-INFTISSTSGLAAGYNNRGTLQSNSP--SL 1872
            PDHL   P    V +SS+  QP+G D N  +NF+IS+++GL AGYNNRGTLQSNSP  S 
Sbjct: 398  PDHLNNIPAHHVVTSSSASHQPNGGDNNYNLNFSISTSTGL-AGYNNRGTLQSNSPSSSF 456

Query: 1873 LP-HLQRFSPIVDGSSTVPFFIGAA 1944
            LP HLQRF P+ DGSS +PFFIGAA
Sbjct: 457  LPHHLQRFQPL-DGSSNLPFFIGAA 480


>ref|XP_002271548.1| PREDICTED: transcription factor TCP2-like [Vitis vinifera]
          Length = 444

 Score =  191 bits (486), Expect = 6e-46
 Identities = 116/225 (51%), Positives = 128/225 (56%), Gaps = 14/225 (6%)
 Frame = +1

Query: 499  MEEDEIQAQVCKFPRVGNGSRN--------------EEEDGEVGLXXXXXXXXXXXXXXX 636
            ME DEIQ Q CKF RVGNG  +              +EEDGE+                 
Sbjct: 1    MEVDEIQTQACKFSRVGNGRNDLTKIGQKGGDQYPDDEEDGEIKRGGGGGSDGGRLRAWH 60

Query: 637  XXXXFXXXXXXXXXXXXXXXXXGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLG 816
                F                 GGKDRHSKV+TSKGLRDRRVRLSVTTAIQFYDLQDRLG
Sbjct: 61   HSRIFRVSRAS-----------GGKDRHSKVLTSKGLRDRRVRLSVTTAIQFYDLQDRLG 109

Query: 817  YDQPSKAVEWLIKSASDAIAELPSLNNTFPDTPKQPSDEKRASVGTTTNEQGFDSADAEM 996
            YDQPSKAVEWLIK+ASDAIAELPSLN++FPDTPKQ SDEKR S GT   EQGFDS D  +
Sbjct: 110  YDQPSKAVEWLIKAASDAIAELPSLNSSFPDTPKQLSDEKRPSPGT---EQGFDSVD--L 164

Query: 997  DGGENNNYHHQQQNXXXXXXXXXXXXXXXXXXXXXXXRSDIRANR 1131
            +G  N  + H QQ+                       RS+IR NR
Sbjct: 165  EGEHNYQHQHPQQHISLSKSACSSTSETSKGSGLSLSRSEIRVNR 209



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 60/83 (72%), Positives = 67/83 (80%)
 Frame = +1

Query: 1696 QHFSFIPDHLMPAPVVTSSSHQQPSGNDYNLINFTISSTSGLAAGYNNRGTLQSNSPSLL 1875
            QHFSF+PDHL+P  V TS    QP G+D NL NFTISS  GLA G+N RGTLQSNSPSLL
Sbjct: 337  QHFSFVPDHLIP--VATS----QPGGSDNNL-NFTISS--GLA-GFN-RGTLQSNSPSLL 385

Query: 1876 PHLQRFSPIVDGSSTVPFFIGAA 1944
            PHLQRFSPI DGS+ +PFF+GAA
Sbjct: 386  PHLQRFSPI-DGSN-LPFFMGAA 406


>ref|XP_003547199.1| PREDICTED: transcription factor TCP2-like [Glycine max]
          Length = 511

 Score =  189 bits (481), Expect = 2e-45
 Identities = 120/248 (48%), Positives = 133/248 (53%), Gaps = 4/248 (1%)
 Frame = +1

Query: 499  MEEDEIQAQVCKFPRVGNGSRNEE--EDGEVGLXXXXXXXXXXXXXXXXXXXFXXXXXXX 672
            MEEDEIQA  CKFPRVGNG  +++  E+ E G                            
Sbjct: 1    MEEDEIQA--CKFPRVGNGRSSDQYQEEEEEGDLRRKGVGGGGGSDASTNHFHQSSWHYS 58

Query: 673  XXXXXXXXXXGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLI 852
                      GGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLI
Sbjct: 59   SRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLI 118

Query: 853  KSASDAIAELPSLNNTFPDTPKQPSDEKR--ASVGTTTNEQGFDSADAEMDGGENNNYHH 1026
            K+AS+AI+ELPSLNN FPDTPKQPSDEKR  +  G    +QGFD AD     G+ N   +
Sbjct: 119  KAASEAISELPSLNNPFPDTPKQPSDEKRPTSGGGQQQQQQGFDDAD-----GDTNYQQN 173

Query: 1027 QQQNXXXXXXXXXXXXXXXXXXXXXXXRSDIRANRFXXXXXXXXXXXXXXXXXXXXNNES 1206
            Q QN                       RS+IR NR                       ES
Sbjct: 174  QSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNR--VKARERARERAAKEKEKEKEKES 231

Query: 1207 HNNIAHHN 1230
              NIAHH+
Sbjct: 232  DFNIAHHH 239



 Score =  120 bits (301), Expect = 2e-24
 Identities = 89/179 (49%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
 Frame = +1

Query: 1432 GSVQETARQQ--WSSA--PMDYFSSGLLXXXXXXXXXXXXXXXXXXXXQMIQLGHSHNSL 1599
            GS Q+  +Q   WS    PMDYFS+GLL                       QLGH H   
Sbjct: 304  GSQQQQQQQHHHWSQTVTPMDYFSAGLLVGPSSSASTQQHQSSG-----QFQLGHGHA-- 356

Query: 1600 ADHHHQAIMSMSSVSPFSCNTGENQSCSDQMQQHFSFIPDHL--MPAPVVTSSSHQQPSG 1773
               H  A+    S+SPFS   GEN S   +  QHFSF+PDHL  MP+   ++S H +   
Sbjct: 357  ---HAHAL----SISPFS---GENHS---EQMQHFSFMPDHLNNMPSSAASASQHSEGDN 403

Query: 1774 NDYNLINFTISSTSGLAAGYNNRGTLQSNSPS--LLPHLQRFSPIVDGSSTVPFFIGAA 1944
            N+YNL NF+ISS SGLA GYN RGTLQSNSPS   LP LQRF P+VDGSS +PFFIGAA
Sbjct: 404  NNYNL-NFSISS-SGLA-GYN-RGTLQSNSPSSSFLPLLQRFQPLVDGSSNLPFFIGAA 458


>ref|XP_002519642.1| conserved hypothetical protein [Ricinus communis]
            gi|223541059|gb|EEF42615.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 497

 Score =  172 bits (436), Expect = 4e-40
 Identities = 113/234 (48%), Positives = 125/234 (53%), Gaps = 23/234 (9%)
 Frame = +1

Query: 499  MEEDEIQAQV-CKFPRVGNGSRN----------------------EEEDGEVGLXXXXXX 609
            ME +EIQ Q  CKFPRVG+  R+                      EEEDGE  L      
Sbjct: 1    MEVEEIQTQPPCKFPRVGSNGRSDTTKIGQKGSNNTGTDHNQYPDEEEDGE--LIKRPNL 58

Query: 610  XXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXGGKDRHSKVMTSKGLRDRRVRLSVTTAIQ 789
                                           GGKDRHSKV TSKGLRDRRVRLSVTTAIQ
Sbjct: 59   GTGAGGDAGSANNRLREWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQ 118

Query: 790  FYDLQDRLGYDQPSKAVEWLIKSASDAIAELPSLNNTFPDTPKQPSDEKRASVGTTTNEQ 969
            FYDLQDRLGYDQPSKAVEWLIK+A+D+I ELPSLN +FPDTPKQ SDEKR S GT   EQ
Sbjct: 119  FYDLQDRLGYDQPSKAVEWLIKAAADSINELPSLNGSFPDTPKQLSDEKRTSDGT---EQ 175

Query: 970  GFDSADAEMDGGENNNYHHQQQNXXXXXXXXXXXXXXXXXXXXXXXRSDIRANR 1131
             FDSAD E++  + N   +Q Q+                       RSDIR NR
Sbjct: 176  AFDSADVELE--DPNFNQNQNQHLSLSKSACSSTSDTSKGSGLSLLRSDIRVNR 227



 Score = 94.0 bits (232), Expect = 2e-16
 Identities = 80/172 (46%), Positives = 94/172 (54%), Gaps = 6/172 (3%)
 Frame = +1

Query: 1447 TARQQWSSAPMDYFS-SGLLXXXXXXXXXXXXXXXXXXXXQMIQLGHSHNSLADHHHQAI 1623
            TARQ W   PMDYF  +GLL                      IQLG+S +          
Sbjct: 310  TARQ-WPLIPMDYFGGTGLLGPSSSRTAHQSSGFPG-----QIQLGNSISQA-------- 355

Query: 1624 MSMSSVSPFSCNTGENQSCSDQMQQHFSFIPDHLMPAPVVTSSSHQQPSGNDYNLINFTI 1803
            M+MS + PF+ + GE+     Q  QHF F+ DHL+P     SS      G DYNL NFTI
Sbjct: 356  MTMS-IPPFNFS-GESHHQEQQQLQHFPFVSDHLIPVATTQSSC----PGGDYNL-NFTI 408

Query: 1804 SSTSGLAAGYNNRGTLQSNSPS---LLPHLQRFSPI--VDGSSTVPFFIGAA 1944
            S  SGL AG+ NRGTLQSNS S   L+PHLQRFS    +DGS+ VPFFIGAA
Sbjct: 409  S--SGL-AGF-NRGTLQSNSSSHSLLMPHLQRFSSSSPIDGSTNVPFFIGAA 456


>gb|AET97663.1| TCP transcription factor [Camellia sinensis]
          Length = 459

 Score =  170 bits (431), Expect = 2e-39
 Identities = 100/192 (52%), Positives = 116/192 (60%), Gaps = 14/192 (7%)
 Frame = +1

Query: 499  MEEDEIQAQVCKFPRVGNGSRN--------------EEEDGEVGLXXXXXXXXXXXXXXX 636
            ME DEIQ Q  KFPR+GNG  +              +EEDGE+                 
Sbjct: 1    MEVDEIQTQGHKFPRIGNGRGDCNKIGQKGEEQYPDDEEDGEIKRSGGGGIEIGGGGVGR 60

Query: 637  XXXXFXXXXXXXXXXXXXXXXXGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLG 816
                                  GGKD HSKV TSKGLRDRRVRLSVTTAIQ Y LQDRLG
Sbjct: 61   LCAW------PSSRIVRVSRASGGKDGHSKVWTSKGLRDRRVRLSVTTAIQLYYLQDRLG 114

Query: 817  YDQPSKAVEWLIKSASDAIAELPSLNNTFPDTPKQPSDEKRASVGTTTNEQGFDSADAEM 996
            YDQP KAVEWL+K+A+ +I ELPS+N +FPDTP+Q SDEKR+S GT   E+GFDSAD E+
Sbjct: 115  YDQPRKAVEWLLKAAAKSIDELPSINTSFPDTPQQLSDEKRSSAGT---ERGFDSADLEL 171

Query: 997  DGGENNNYHHQQ 1032
            DGG+   +HHQQ
Sbjct: 172  DGGD-QTFHHQQ 182



 Score =  107 bits (267), Expect = 2e-20
 Identities = 80/180 (44%), Positives = 97/180 (53%), Gaps = 3/180 (1%)
 Frame = +1

Query: 1414 TSSPRGGSV---QETARQQWSSAPMDYFSSGLLXXXXXXXXXXXXXXXXXXXXQMIQLGH 1584
            T+SP G +    Q++ R QWSSAPMDYF+SGLL                      I LG+
Sbjct: 270  TASPNGSAANLFQKSTRPQWSSAPMDYFTSGLLNSSPSRNPHSSGFSG------QIHLGN 323

Query: 1585 SHNSLADHHHQAIMSMSSVSPFSCNTGENQSCSDQMQQHFSFIPDHLMPAPVVTSSSHQQ 1764
            S           +    ++S FS     +     ++ QHFSF+PDHL+P           
Sbjct: 324  S-----------LPPSMAISQFSLTADHHHHHHPEL-QHFSFVPDHLIPVSTA------- 364

Query: 1765 PSGNDYNLINFTISSTSGLAAGYNNRGTLQSNSPSLLPHLQRFSPIVDGSSTVPFFIGAA 1944
              G DYNL NFTIS  SG  AG+ NRGTLQSNSPSLLPH+QR S I DGS+ VPFFIG A
Sbjct: 365  GVGGDYNL-NFTIS--SGGLAGF-NRGTLQSNSPSLLPHVQRLSTI-DGSN-VPFFIGTA 418


Top