BLASTX nr result

ID: Glycyrrhiza23_contig00004888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004888
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI29046.1| allene-oxide cyclase [Medicago truncatula]             94   9e-18
ref|NP_001242726.1| allene oxide cyclase 4, chloroplastic-like [...    94   9e-18
ref|XP_003628626.1| Allene-oxide cyclase [Medicago truncatula] g...    93   3e-17
ref|NP_001240033.1| allene oxide cyclase 4, chloroplastic-like [...    93   3e-17
gb|AFK47606.1| unknown [Medicago truncatula]                           91   1e-16

>emb|CAI29046.1| allene-oxide cyclase [Medicago truncatula]
          Length = 250

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/112 (52%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
 Frame = +2

Query: 86  MASSSFALRTIPSSFVKPP--CANPRSLLXXXXXXXXXXXXXXXXXXXXXXXXXXTTLPH 259
           MASSS+ALRTIPSSFVKP      PRS L                               
Sbjct: 1   MASSSYALRTIPSSFVKPTAFATTPRSFL--------TPSSAFTPFTSSKNLKMNAAFSK 52

Query: 260 SYLSSVPRKSFTCRSQANEHSDT--VQELSVYEINERDRGSPAYLRLGFKSV 409
           S  SSVP KSFTC+SQ NE++DT  VQE+ VYE+NERDRGSPAYLRL  KSV
Sbjct: 53  SCFSSVPMKSFTCKSQVNEYADTEKVQEMHVYELNERDRGSPAYLRLSNKSV 104


>ref|NP_001242726.1| allene oxide cyclase 4, chloroplastic-like [Glycine max]
           gi|332739622|gb|AEE99200.1| allene oxide cyclase 5
           [Glycine max]
          Length = 257

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/108 (52%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
 Frame = +2

Query: 95  SSFALRTIPSSFVKPPCANPR--SLLXXXXXXXXXXXXXXXXXXXXXXXXXXTTLPHSYL 268
           SS AL+TIPSSFVKP   + +  SL                           +TLPH  L
Sbjct: 5   SSHALKTIPSSFVKPVTVSAKTTSLYLTPSNTKPFLPFTSSNHSLTENLKLNSTLPHFCL 64

Query: 269 SSVPRKSFTCRSQANE-HSDTVQELSVYEINERDRGSPAYLRLGFKSV 409
           SSVP+KSFTCRSQA    S+ VQEL+VYEINERDRGSP YLRL +KSV
Sbjct: 65  SSVPKKSFTCRSQAEPVDSEKVQELTVYEINERDRGSPVYLRLSYKSV 112


>ref|XP_003628626.1| Allene-oxide cyclase [Medicago truncatula]
           gi|355522648|gb|AET03102.1| Allene-oxide cyclase
           [Medicago truncatula]
          Length = 119

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/112 (51%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
 Frame = +2

Query: 86  MASSSFALRTIPSSFVKPPC--ANPRSLLXXXXXXXXXXXXXXXXXXXXXXXXXXTTLPH 259
           MASSS+ALRTIPSSFVKP      P+S L                          T    
Sbjct: 1   MASSSYALRTIPSSFVKPTAFATTPKSFLTPSSAFTKNLRMN-------------TAFSQ 47

Query: 260 SYLSSVPRKSFTCRSQANEHSDT--VQELSVYEINERDRGSPAYLRLGFKSV 409
           S  SS+P KSFTC+SQANEH+DT  VQE+ VYE NE DRGSPAY RL  KSV
Sbjct: 48  SCFSSLPMKSFTCKSQANEHADTEKVQEMHVYEFNESDRGSPAYSRLSNKSV 99


>ref|NP_001240033.1| allene oxide cyclase 4, chloroplastic-like [Glycine max]
           gi|332739624|gb|AEE99201.1| allene oxide cyclase 6
           [Glycine max]
          Length = 255

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 59/109 (54%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
 Frame = +2

Query: 89  ASSSFALRTIP-SSFVKPPCANPRSLLXXXXXXXXXXXXXXXXXXXXXXXXXXTTLPHSY 265
           A SS AL+TIP SSFVKP    P S                            +TLPH  
Sbjct: 3   AYSSHALKTIPFSSFVKPVSTKPTSFFTPSPTKPFLPFTSPNHSLTKNLKLN-STLPHFC 61

Query: 266 LSSVPRKSFTCRSQANE-HSDTVQELSVYEINERDRGSPAYLRLGFKSV 409
           LSSVP+KSFTCRSQA    S+ VQELSVYEINERDRGSP YLRL +KSV
Sbjct: 62  LSSVPKKSFTCRSQAEPVDSEKVQELSVYEINERDRGSPVYLRLSYKSV 110


>gb|AFK47606.1| unknown [Medicago truncatula]
          Length = 251

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 57/112 (50%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
 Frame = +2

Query: 86  MASSSFALRTIPSSFVKPP--CANPRSLLXXXXXXXXXXXXXXXXXXXXXXXXXXTTLPH 259
           MASSS+ALRTIPSSFV+P      PRS L                               
Sbjct: 1   MASSSYALRTIPSSFVRPTAFATTPRSFL--------TPSSAFTPFTSSKNLKMNAAFSK 52

Query: 260 SYLSSVPRKSFTCRSQANEHSDT--VQELSVYEINERDRGSPAYLRLGFKSV 409
           S  SSVP KSFTC+SQ  E++DT  VQE+ VYE+NERDRGSPAYLRL  KSV
Sbjct: 53  SCFSSVPMKSFTCKSQVTEYADTEKVQEMHVYELNERDRGSPAYLRLSNKSV 104


Top