BLASTX nr result

ID: Glycyrrhiza23_contig00004881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004881
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48484.1| unknown [Medicago truncatula]                          210   5e-52
ref|XP_003602457.1| 60S ribosomal protein L6 [Medicago truncatul...   210   5e-52
ref|XP_003602484.1| 60S ribosomal protein L6 [Medicago truncatul...   209   1e-51
gb|AFK47926.1| unknown [Medicago truncatula]                          204   3e-50
gb|ACJ84110.1| unknown [Medicago truncatula]                          204   3e-50

>gb|AFK48484.1| unknown [Medicago truncatula]
          Length = 170

 Score =  210 bits (534), Expect = 5e-52
 Identities = 103/126 (81%), Positives = 108/126 (85%)
 Frame = +1

Query: 4   MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 183
           MAPKQR ARVSRNPELIRGIGKYS+S MYHKRG+WAIKAK+GG  PRHD           
Sbjct: 1   MAPKQRTARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPVAKPAAPVEK 60

Query: 184 XXXFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 363
              FYPADDVKKP+RNKH+PKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLRNKHRPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 120

Query: 364 TGPFKI 381
           TGPFKI
Sbjct: 121 TGPFKI 126


>ref|XP_003602457.1| 60S ribosomal protein L6 [Medicago truncatula]
           gi|355491505|gb|AES72708.1| 60S ribosomal protein L6
           [Medicago truncatula]
          Length = 233

 Score =  210 bits (534), Expect = 5e-52
 Identities = 103/126 (81%), Positives = 108/126 (85%)
 Frame = +1

Query: 4   MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 183
           MAPKQR ARVSRNPELIRGIGKYS+S MYHKRG+WAIKAK+GG  PRHD           
Sbjct: 1   MAPKQRTARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPVAKPAAPVEK 60

Query: 184 XXXFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 363
              FYPADDVKKP+RNKH+PKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLRNKHRPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 120

Query: 364 TGPFKI 381
           TGPFKI
Sbjct: 121 TGPFKI 126



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +2

Query: 569 VLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 712
           VLPQEKKDDQKTVD+ LLKAI+SVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 186 VLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF 233


>ref|XP_003602484.1| 60S ribosomal protein L6 [Medicago truncatula]
           gi|217071394|gb|ACJ84057.1| unknown [Medicago
           truncatula] gi|217071824|gb|ACJ84272.1| unknown
           [Medicago truncatula] gi|355491532|gb|AES72735.1| 60S
           ribosomal protein L6 [Medicago truncatula]
           gi|388498428|gb|AFK37280.1| unknown [Medicago
           truncatula]
          Length = 233

 Score =  209 bits (531), Expect = 1e-51
 Identities = 103/126 (81%), Positives = 107/126 (84%)
 Frame = +1

Query: 4   MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 183
           MAPK R ARVSRNPELIRGIGKYS+S MYHKRG+WAIKAK+GG  PRHD           
Sbjct: 1   MAPKTRTARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPVAKPAAPVEK 60

Query: 184 XXXFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 363
              FYPADDVKKP+RNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 120

Query: 364 TGPFKI 381
           TGPFKI
Sbjct: 121 TGPFKI 126



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +2

Query: 569 VLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 712
           VLPQEKKDDQKTVD+ LLKAI+SVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 186 VLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF 233


>gb|AFK47926.1| unknown [Medicago truncatula]
          Length = 234

 Score =  204 bits (519), Expect = 3e-50
 Identities = 103/127 (81%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +1

Query: 4   MAP-KQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXX 180
           MAP K+R  RVSRNP+LIRGIGK+SKSQMYHK+GIWAIKAKNGGV PRHD          
Sbjct: 1   MAPTKERAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAE 60

Query: 181 XXXXFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 360
               FYPADDVKKP+RNKHKPK TKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL
Sbjct: 61  KPPKFYPADDVKKPLRNKHKPKQTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 120

Query: 361 VTGPFKI 381
           VTGPFKI
Sbjct: 121 VTGPFKI 127



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = +2

Query: 572 LPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 712
           LPQ+KKDDQKTVD+AL+KAIESVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 188 LPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF 234


>gb|ACJ84110.1| unknown [Medicago truncatula]
          Length = 234

 Score =  204 bits (519), Expect = 3e-50
 Identities = 103/127 (81%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +1

Query: 4   MAP-KQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXX 180
           MAP K+R  RVSRNP+LIRGIGK+SKSQMYHK+GIWAIKAKNGGV PRHD          
Sbjct: 1   MAPTKERAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAE 60

Query: 181 XXXXFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 360
               FYPADDVKKP+RNKHKPK TKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL
Sbjct: 61  KPPKFYPADDVKKPLRNKHKPKQTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 120

Query: 361 VTGPFKI 381
           VTGPFKI
Sbjct: 121 VTGPFKI 127



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = +2

Query: 572 LPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 712
           LPQ+KKDDQKTVD+AL+KAIESVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 188 LPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF 234


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