BLASTX nr result

ID: Glycyrrhiza23_contig00004879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004879
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549681.1| PREDICTED: uncharacterized protein LOC100527...   111   8e-23
ref|XP_003524765.1| PREDICTED: uncharacterized protein LOC100819...   107   2e-21
ref|XP_003527085.1| PREDICTED: uncharacterized protein LOC100797...    82   9e-14
ref|XP_003522323.1| PREDICTED: uncharacterized protein LOC100780...    80   3e-13
ref|XP_002514747.1| conserved hypothetical protein [Ricinus comm...    59   8e-07

>ref|XP_003549681.1| PREDICTED: uncharacterized protein LOC100527473 [Glycine max]
           gi|255632430|gb|ACU16565.1| unknown [Glycine max]
          Length = 86

 Score =  111 bits (278), Expect = 8e-23
 Identities = 60/86 (69%), Positives = 63/86 (73%), Gaps = 12/86 (13%)
 Frame = -3

Query: 556 MAGTSFRLFVILLCLSHLTCLKAVPVTRTENLMQDVRVPLTLENTLKV------------ 413
           MAGT FRLFVILL LSHL CLKAVPVTRTENLMQ  +V LTLEN  KV            
Sbjct: 1   MAGTLFRLFVILLGLSHLMCLKAVPVTRTENLMQGPQVHLTLENNYKVITERNLHWEEQP 60

Query: 412 TTERMDLELHDYAPSGANGRHTPRGP 335
            TERM+LELHDY+PSG NGRHTPR P
Sbjct: 61  ITERMELELHDYSPSGPNGRHTPRAP 86


>ref|XP_003524765.1| PREDICTED: uncharacterized protein LOC100819493 [Glycine max]
          Length = 85

 Score =  107 bits (267), Expect = 2e-21
 Identities = 60/86 (69%), Positives = 63/86 (73%), Gaps = 12/86 (13%)
 Frame = -3

Query: 556 MAGTSFRLFVILLCLSHLTCLKAVPVTRTENLMQDVRVPLTLENTLKV------------ 413
           MAGT FRLFVILL LSHL CLKAVPVTRTENLMQ  +V LTLEN  KV            
Sbjct: 1   MAGTLFRLFVILLGLSHLVCLKAVPVTRTENLMQG-QVHLTLENNHKVITERNLHWEEPT 59

Query: 412 TTERMDLELHDYAPSGANGRHTPRGP 335
            TERM+LELHDY+PSG NGRHTPR P
Sbjct: 60  ITERMELELHDYSPSGPNGRHTPRAP 85


>ref|XP_003527085.1| PREDICTED: uncharacterized protein LOC100797485 [Glycine max]
          Length = 92

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 15/82 (18%)
 Frame = -3

Query: 535 LFVILLCLSHLTCLKAVPVTRTENLMQDVRV---PLTLENTLKVTT------------ER 401
           LFVILL LSH  CLKAVPVTRTE+LMQ+ +V    L   +  KV T            ER
Sbjct: 9   LFVILLGLSHFACLKAVPVTRTESLMQEPKVLHHALDNIHNHKVITGIKWQQEEPSFAER 68

Query: 400 MDLELHDYAPSGANGRHTPRGP 335
           MDLELHDY PS ANGRHTP+ P
Sbjct: 69  MDLELHDYPPSAANGRHTPKPP 90


>ref|XP_003522323.1| PREDICTED: uncharacterized protein LOC100780086 [Glycine max]
          Length = 92

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 48/90 (53%), Positives = 55/90 (61%), Gaps = 16/90 (17%)
 Frame = -3

Query: 556 MAGTSFRL-FVILLCLSHLTCLKAVPVTRTENLMQDVRV---PLTLENTLKVTT------ 407
           M G+ F L FVIL  LSH  CLKAVP+TRTE+LMQD +V    L   +  K+ T      
Sbjct: 1   MKGSLFHLLFVILFGLSHFVCLKAVPITRTESLMQDPKVIHHALDNIHNHKIITEIKGQQ 60

Query: 406 ------ERMDLELHDYAPSGANGRHTPRGP 335
                 ERMDLELHDY P GANG HTP+ P
Sbjct: 61  EEPIFAERMDLELHDYPPYGANGHHTPKPP 90


>ref|XP_002514747.1| conserved hypothetical protein [Ricinus communis]
           gi|223546351|gb|EEF47853.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
 Frame = -3

Query: 556 MAGTSFRLFVILLCLSHLTCLKAVPVTRTENLMQDVRVPLTLENTLKVT----------- 410
           MAGT  RL V+ L +S+L CL A+P+TR   L    +V    E T  V            
Sbjct: 1   MAGTFLRLLVLFLGISNLICLNAIPITRIGRLTHGPQVLTVSETTHMVAKDKNLEEHENL 60

Query: 409 TERMDLELHDYAPSGANGRHTPRGP 335
            ER+  EL+DY  SGAN RHTP  P
Sbjct: 61  EERIAAELNDYPGSGANHRHTPWPP 85


Top