BLASTX nr result

ID: Glycyrrhiza23_contig00004863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004863
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619792.1| Plastid DNA-binding protein [Medicago trunca...   180   2e-43
ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855...    61   1e-07
emb|CBI26400.3| unnamed protein product [Vitis vinifera]               61   1e-07

>ref|XP_003619792.1| Plastid DNA-binding protein [Medicago truncatula]
           gi|355494807|gb|AES76010.1| Plastid DNA-binding protein
           [Medicago truncatula]
          Length = 378

 Score =  180 bits (456), Expect = 2e-43
 Identities = 91/147 (61%), Positives = 107/147 (72%)
 Frame = +2

Query: 2   QVRNDVNTVEAVSSCPPDYVAPERHLLKEEIEQDSAPFIEXXXXXXXXXXXXXXXFADIE 181
           +V NDV + E VSSCP DYVAPE HLLKEEIEQ SAP +E                 DI+
Sbjct: 232 EVTNDVKSDETVSSCPSDYVAPEIHLLKEEIEQVSAPIVEKSGSSCSKDHIHDSKSVDIK 291

Query: 182 NHPTIEKKSFEKAGYEGKAQDALEDLPGVDSPKHKKEQYQESSEMDESKIDSSKNKETNV 361
           NHPTI+ KSF+KAG E K QD  +DLP VDSP+H KEQ QES ++DESKID S  +E++V
Sbjct: 292 NHPTIKIKSFDKAGLERKVQDGAQDLPVVDSPQHIKEQSQESLKLDESKIDGSNMRESSV 351

Query: 362 AVVSRKSTLWGNLKSFADGIINIWRKL 442
           AV S KSTLWGNLKSFADG++N+WRKL
Sbjct: 352 AVASDKSTLWGNLKSFADGVLNMWRKL 378


>ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855088 [Vitis vinifera]
          Length = 381

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +2

Query: 233 KAQDALEDLPGVDSPKHKKEQYQESSEMDESKIDSSKNKETNVAVVSRKSTLWGNLKSFA 412
           K + A E L   D  KH+ EQ Q S E+D+   D S+ +  N   + + ST+W NLKSFA
Sbjct: 269 KEEVASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQ--NEEELPKGSTVWANLKSFA 326

Query: 413 DGIINIWRKL 442
            GIIN+WRKL
Sbjct: 327 GGIINMWRKL 336


>emb|CBI26400.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +2

Query: 233 KAQDALEDLPGVDSPKHKKEQYQESSEMDESKIDSSKNKETNVAVVSRKSTLWGNLKSFA 412
           K + A E L   D  KH+ EQ Q S E+D+   D S+ +  N   + + ST+W NLKSFA
Sbjct: 259 KEEVASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQ--NEEELPKGSTVWANLKSFA 316

Query: 413 DGIINIWRKL 442
            GIIN+WRKL
Sbjct: 317 GGIINMWRKL 326


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