BLASTX nr result

ID: Glycyrrhiza23_contig00004862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004862
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   480   e-133
gb|ACU19564.1| unknown [Glycine max]                                  480   e-133
ref|NP_001242536.1| uncharacterized protein LOC100800419 [Glycin...   422   e-115
gb|AFK45437.1| unknown [Lotus japonicus]                              418   e-114
ref|XP_003554481.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   412   e-112

>ref|XP_003519101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 380

 Score =  480 bits (1235), Expect = e-133
 Identities = 257/377 (68%), Positives = 285/377 (75%), Gaps = 17/377 (4%)
 Frame = +1

Query: 220  MEVPEMEGKTESHATSVAAFVEGGIQEACDDACSICLEDFCESDPANVTNCKHEFHLQCI 399
            MEVPEMEGKTESH TS AAFVEGG+QEACDDACSICLEDFC+SDPA VTNCKHEFHLQCI
Sbjct: 1    MEVPEMEGKTESHMTSAAAFVEGGVQEACDDACSICLEDFCKSDPATVTNCKHEFHLQCI 60

Query: 400  LEWCQRSSQCPMCWQTISLKDATSQELLEAVEQERTAR---SRNAAIFHHPILGGFELQQ 570
            LEWCQRSSQCPMCWQ ISL+DATSQELLEAVE ER+ R   SRNAAIFHHP LG FELQ 
Sbjct: 61   LEWCQRSSQCPMCWQPISLRDATSQELLEAVELERSLRDTPSRNAAIFHHPTLGDFELQH 120

Query: 571  LPVGVNDGDLEQRIIQHL--XXXXXXXXXXXXXXXXXXXXXXXXXPHLLVFSAEPSAPDS 744
            LP+GVN+ D+E+RIIQHL                           PH LV+S +PSAP S
Sbjct: 121  LPMGVNEADIEERIIQHLTAAAAMRRSHHLSRREGHRTRPSAHGRPHFLVYSTQPSAPPS 180

Query: 745  AVEGGNEPATSPVGSESSP----------SQQIPYVQNQSSSLTPGSAVVT--ITNLHSD 888
            A  GG+EPA  PVGS S+P           QQIP+VQ QSSSLT  S V T  +  +HSD
Sbjct: 181  AAGGGSEPAAIPVGSPSTPLTFDGNEQSSLQQIPHVQTQSSSLTSASTVSTTNLQGVHSD 240

Query: 889  DRESTTRSSPSDQDSEGPSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSRSSS 1068
            DR   + S P+ QD   PSE QSFSDSLRSR NAVSMRYK+SISKGTRGWKERLFS +SS
Sbjct: 241  DRSFASHSFPASQDRAQPSE-QSFSDSLRSRFNAVSMRYKDSISKGTRGWKERLFSPNSS 299

Query: 1069 MSEIGSQVRRELNAGIASASRLMERLETRQNNLPTAMATLSDHLMDCHIAETSNQNNVEA 1248
            MSE+GS+VRRELNA IAS SRLMERLETR+NN   A  +LS+HL++  IAETSNQ+NVEA
Sbjct: 300  MSELGSEVRRELNAKIASVSRLMERLETRENN-SAAGTSLSNHLVNRSIAETSNQSNVEA 358

Query: 1249 RGDNSLHANNTPATCSA 1299
            RG+NSLH NNTP T SA
Sbjct: 359  RGENSLHGNNTPTTFSA 375


>gb|ACU19564.1| unknown [Glycine max]
          Length = 380

 Score =  480 bits (1235), Expect = e-133
 Identities = 257/377 (68%), Positives = 285/377 (75%), Gaps = 17/377 (4%)
 Frame = +1

Query: 220  MEVPEMEGKTESHATSVAAFVEGGIQEACDDACSICLEDFCESDPANVTNCKHEFHLQCI 399
            MEVPEMEGKTESH TS AAFVEGG+QEACDDACSICLEDFC+SDPA VTNCKHEFHLQCI
Sbjct: 1    MEVPEMEGKTESHLTSTAAFVEGGVQEACDDACSICLEDFCKSDPATVTNCKHEFHLQCI 60

Query: 400  LEWCQRSSQCPMCWQTISLKDATSQELLEAVEQERTAR---SRNAAIFHHPILGGFELQQ 570
            LEWCQRSSQCPMCWQ ISL+DATSQELLEAVE ER+ R   SRNAAIFHHP LG FELQ 
Sbjct: 61   LEWCQRSSQCPMCWQPISLRDATSQELLEAVELERSLRDTPSRNAAIFHHPTLGDFELQH 120

Query: 571  LPVGVNDGDLEQRIIQHL--XXXXXXXXXXXXXXXXXXXXXXXXXPHLLVFSAEPSAPDS 744
            LP+GVN+ D+E+RIIQHL                           PH LV+S +PSAP S
Sbjct: 121  LPMGVNEADIEERIIQHLTAAAAMRRSHHLSRREGHRTRPSAHGRPHFLVYSTQPSAPPS 180

Query: 745  AVEGGNEPATSPVGSESSP----------SQQIPYVQNQSSSLTPGSAVVT--ITNLHSD 888
            A  GG+EPA  PVGS S+P           QQIP+VQ QSSSLT  S V T  +  +HSD
Sbjct: 181  AAGGGSEPAAIPVGSPSTPLTFDGNEQSSLQQIPHVQTQSSSLTSASTVSTTNLQGVHSD 240

Query: 889  DRESTTRSSPSDQDSEGPSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSRSSS 1068
            DR   + S P+ QD   PSE QSFSDSLRSR NAVSMRYK+SISKGTRGWKERLFS +SS
Sbjct: 241  DRSFASHSFPASQDRAQPSE-QSFSDSLRSRFNAVSMRYKDSISKGTRGWKERLFSPNSS 299

Query: 1069 MSEIGSQVRRELNAGIASASRLMERLETRQNNLPTAMATLSDHLMDCHIAETSNQNNVEA 1248
            MSE+GS+VRRELNA IAS SRLMERLETR+NN   A  +LS+HL++  IAETSNQ+NVEA
Sbjct: 300  MSELGSEVRRELNAKIASVSRLMERLETRENN-SAAGTSLSNHLVNRSIAETSNQSNVEA 358

Query: 1249 RGDNSLHANNTPATCSA 1299
            RG+NSLH NNTP T SA
Sbjct: 359  RGENSLHGNNTPTTFSA 375


>ref|NP_001242536.1| uncharacterized protein LOC100800419 [Glycine max]
            gi|255641723|gb|ACU21132.1| unknown [Glycine max]
          Length = 383

 Score =  422 bits (1084), Expect = e-115
 Identities = 231/377 (61%), Positives = 262/377 (69%), Gaps = 16/377 (4%)
 Frame = +1

Query: 217  SMEVPEMEGKTESHATSVAAFVEGGIQEACDDACSICLEDFCESDPANVTNCKHEFHLQC 396
            S +V EME KTESH +S AAFVEGGIQE+CDDACSICLE+F  SDP+ VT CKHEFHLQC
Sbjct: 3    SQKVVEMEDKTESHMSSAAAFVEGGIQESCDDACSICLEEFGASDPSTVTTCKHEFHLQC 62

Query: 397  ILEWCQRSSQCPMCWQTISLKDATSQELLEAVEQERTAR---SRNAAIFHHPILGGFELQ 567
            ILEWCQRSSQCPMCWQ ISLKD TSQEL E VEQER+ R   SRNAAIFHHP  G FELQ
Sbjct: 63   ILEWCQRSSQCPMCWQPISLKDPTSQELFEVVEQERSLRATPSRNAAIFHHPAFGDFELQ 122

Query: 568  QLPVGVNDGDLEQRIIQHL--XXXXXXXXXXXXXXXXXXXXXXXXXPHLLVFSAEPSAPD 741
             L + +ND D E+RIIQHL                           P  LVFS +P AP 
Sbjct: 123  HLRMSLNDADFEERIIQHLAAAAAMRRANQLGWREGQRARSSAHGHPQFLVFSNQPIAPS 182

Query: 742  SAVEGGNEPATSPVGSESSP--------SQQIPYVQNQSSSLTPGSAVVTIT--NLHSDD 891
            S   G N+P   P  S S+P        SQQI ++Q QSSS   GS V+      ++S++
Sbjct: 183  SVAGGENDPTAIPNRSPSTPITSVGNEASQQILHLQTQSSSSASGSPVMATNPRGIYSNE 242

Query: 892  RESTTRSSPSDQDSEGPSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSRSSSM 1071
            R ST  SSP++QD   PSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSRSSSM
Sbjct: 243  RGSTACSSPANQDRAEPSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSRSSSM 302

Query: 1072 SEIGSQV-RRELNAGIASASRLMERLETRQNNLPTAMATLSDHLMDCHIAETSNQNNVEA 1248
            S++GS+  RRE+N+GIAS SRLME LET +NN      +LS+H   C I    NQNNVEA
Sbjct: 303  SKLGSETRRREINSGIASVSRLMESLETSENNRVVG-TSLSNHTEGCSIGGVGNQNNVEA 361

Query: 1249 RGDNSLHANNTPATCSA 1299
            RG+NS H +NTPA CSA
Sbjct: 362  RGENSSHDDNTPAACSA 378


>gb|AFK45437.1| unknown [Lotus japonicus]
          Length = 370

 Score =  418 bits (1074), Expect = e-114
 Identities = 230/372 (61%), Positives = 260/372 (69%), Gaps = 17/372 (4%)
 Frame = +1

Query: 235  MEGKTESHATSVAAFVEGGIQEACDDACSICLEDFCESDPANVTNCKHEFHLQCILEWCQ 414
            ME KTE H TS AAFVEGGIQE+CDDACSICLE+FCESDP+ V  C+HEFHLQCILEWCQ
Sbjct: 1    MESKTEGHMTSAAAFVEGGIQESCDDACSICLEEFCESDPSTVPVCRHEFHLQCILEWCQ 60

Query: 415  RSSQCPMCWQTISLKDATSQELLEAVEQERTAR---SRNAAIFHHPILGGFELQQLPVGV 585
            RSSQCPMCWQ ISLKD TSQEL E VE ER  R   SRNAAIFHHP LG F+LQ L +GV
Sbjct: 61   RSSQCPMCWQNISLKDPTSQELFEGVEHERRLRETPSRNAAIFHHPALGDFDLQHLSMGV 120

Query: 586  NDGDLEQRIIQHL-XXXXXXXXXXXXXXXXXXXXXXXXXPHLLVFSAEPSA----PDSAV 750
            NDGD E+R+IQHL                          PH LVFS +P A    PDSA 
Sbjct: 121  NDGDFEERLIQHLAAAAAMRRHHLVRREGQRTRSSAQGHPHFLVFSTQPIASPLGPDSAA 180

Query: 751  EGGNEPATSPVGSESS--------PSQQIPYVQNQSSSLTPGSAVVT-ITNLHSDDREST 903
             GGNEPA  PVGS S+        PSQQI +++ Q SS + GS + T    ++S DR S 
Sbjct: 181  GGGNEPAVIPVGSPSTPIAFVGDEPSQQISHIRTQRSSSSSGSGMATNRQGIYSSDRGSA 240

Query: 904  TRSSPSDQDSEGPSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSRSSSMSEIG 1083
              SSP+ QD  GPSELQSFSDSLRS+LN+VSMRYKESISKG RGWKERLFSRSSSMSE G
Sbjct: 241  APSSPASQDRAGPSELQSFSDSLRSQLNSVSMRYKESISKGARGWKERLFSRSSSMSEPG 300

Query: 1084 SQVRRELNAGIASASRLMERLETRQNNLPTAMATLSDHLMDCHIAETSNQNNVEARGDNS 1263
            S+ R E+NA IAS S+LME LETR+N   T M +     M    AE +NQ++VEARGDNS
Sbjct: 301  SEARSEVNAVIASVSQLMESLETRKN---TRMHSEDGGSM----AEVNNQSSVEARGDNS 353

Query: 1264 LHANNTPATCSA 1299
             H +N+PA CSA
Sbjct: 354  PHHDNSPAACSA 365


>ref|XP_003554481.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 389

 Score =  412 bits (1059), Expect = e-112
 Identities = 230/382 (60%), Positives = 259/382 (67%), Gaps = 21/382 (5%)
 Frame = +1

Query: 217  SMEVPEMEGKTESHATSVAAFVEGGIQEACDDACSICLEDFCESDPANVTNCKHEFHLQC 396
            S  V EMEGKTE   TS AAFVEGGIQE+CDDACSICLE+FC SDP+ VT CKHEFHLQC
Sbjct: 3    SQNVVEMEGKTEIRMTSAAAFVEGGIQESCDDACSICLEEFCASDPSTVTTCKHEFHLQC 62

Query: 397  ILEWCQRSSQCPMCWQTISLKDATSQELLEAVEQERTAR---SRNAAIFHHPILGGFELQ 567
            ILEWCQRSSQCP+CWQ ISLKD TSQEL EAVEQER+ R   SRNAAIFHHP  G FELQ
Sbjct: 63   ILEWCQRSSQCPICWQPISLKDPTSQELFEAVEQERSWRATPSRNAAIFHHPAFGDFELQ 122

Query: 568  QLPVGVNDGDLEQRIIQHL--XXXXXXXXXXXXXXXXXXXXXXXXXPHLLVFSAEPSAPD 741
             L +  ND D E+RIIQHL                           PH LVFS +P AP 
Sbjct: 123  HLRMNANDADFEERIIQHLAAAATMRRVNQLGRREGQQTRSSPHVHPHFLVFSNQPIAPS 182

Query: 742  SAVE----GGNEPATSPVGSESSP--------SQQIPYVQNQSSSLTPGSAVVTIT--NL 879
            S ++    G N+P   P  S S+P        SQQI ++Q QSSS   GS V+      +
Sbjct: 183  SGLDPVSRGENDPTAIPNRSPSAPITSDGNEASQQILHLQTQSSSSASGSPVMATNRQGI 242

Query: 880  HSDDRESTTRSSPSDQDSEGPSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSR 1059
            +S+DR ST RSSP  QD    SELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFS 
Sbjct: 243  YSNDRGSTARSSPVVQDRAESSELQSFSDSLRSRLNAVSMRYKESISKGTRGWKERLFSH 302

Query: 1060 SSSMSEIGSQV-RRELNAGIASASRLMERLETRQNNLPTAMA-TLSDHLMDCHIAETSNQ 1233
            SSSMSE+GS+  RRE+ AGIAS SRLME LET +NN     + +  +H+ D  +   SNQ
Sbjct: 303  SSSMSELGSETRRREMKAGIASVSRLMESLETSENNRAVGTSLSNQNHIEDSSMGGVSNQ 362

Query: 1234 NNVEARGDNSLHANNTPATCSA 1299
            NNVEA G+ S H +NTPA CSA
Sbjct: 363  NNVEASGEKSSHDDNTPAACSA 384


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