BLASTX nr result

ID: Glycyrrhiza23_contig00004811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004811
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550742.1| PREDICTED: U-box domain-containing protein 1...   426   e-117
gb|AFK40179.1| unknown [Medicago truncatula]                          400   e-109
ref|XP_003608976.1| U-box domain-containing protein [Medicago tr...   395   e-107
ref|XP_003527025.1| PREDICTED: U-box domain-containing protein 1...   358   1e-96
ref|XP_002318035.1| predicted protein [Populus trichocarpa] gi|2...   335   9e-90

>ref|XP_003550742.1| PREDICTED: U-box domain-containing protein 19-like [Glycine max]
          Length = 676

 Score =  426 bits (1096), Expect = e-117
 Identities = 222/290 (76%), Positives = 254/290 (87%), Gaps = 3/290 (1%)
 Frame = +3

Query: 3    AYEVRVLSRNSIFNRACLIEVGAVPPLLSLLVT---DDRTTQENAISALLKLSKHTTGPE 173
            A E+R L+R SIFNRACLIE+G VPPL+ LL +   D+++TQE  ISALLKLSKH  GP+
Sbjct: 388  AQEIRFLARTSIFNRACLIEMGTVPPLIELLASASNDNKSTQETTISALLKLSKHPNGPK 447

Query: 174  NIISSNGLNPILTVLKKGLTLEARQIAAAVIFYLSSVKEYRKLIGENPEAIPALVELVKE 353
            NII+S GL  IL+VLK GL+LEARQ+AAA IFYLSSVKE+RKLIGENP+ IPALVELVKE
Sbjct: 448  NIINSGGLTVILSVLKNGLSLEARQVAAATIFYLSSVKEFRKLIGENPDVIPALVELVKE 507

Query: 354  GTTCGKKNATVAIFGLLLLPRNHRSVLAAGAVPALVDILASSEKDELVTESLAVLAVLAE 533
            GTTCG+KNA VAIFGLLLLPRNH+ V+AAGAVPAL+DI+ASS KDELVTESLAVLA LAE
Sbjct: 508  GTTCGRKNAVVAIFGLLLLPRNHQRVIAAGAVPALLDIIASSNKDELVTESLAVLAALAE 567

Query: 534  DVDGAHAVLRASTLPLVTGKLRSSATSRAGKEHSVSILLSLCVNVGAEIVAVLAKDPSLM 713
            +VDGA  +L+ S L L+ G LR SATSR GKEHS SILLSLCVNVGAE+VAVLAK+PSLM
Sbjct: 568  NVDGAREILQGSALRLIVGMLR-SATSREGKEHSASILLSLCVNVGAEVVAVLAKEPSLM 626

Query: 714  PLLYSLLTDGTSHAAKKGRFLIKVLQDFNETTTSGLKGSSVPRERSLHVW 863
            PLLYSLLTDGT HAAKK RFLIKV+QDF+ET ++GLKGSS+P+ERSLHVW
Sbjct: 627  PLLYSLLTDGTCHAAKKARFLIKVIQDFHETRSAGLKGSSLPQERSLHVW 676


>gb|AFK40179.1| unknown [Medicago truncatula]
          Length = 418

 Score =  400 bits (1028), Expect = e-109
 Identities = 214/282 (75%), Positives = 239/282 (84%), Gaps = 1/282 (0%)
 Frame = +3

Query: 3   AYEVRVLSRNSIFNRACLIEVGAVPPLLSLLVTDDRTTQENAISALLKLSKHTTGPENII 182
           AYE+R+L+R+SIFNRACLIEVG VPPLL LL T+D+TTQENAISALLKLSK+ TGPENII
Sbjct: 130 AYEIRLLTRSSIFNRACLIEVGTVPPLLDLLATEDKTTQENAISALLKLSKYATGPENII 189

Query: 183 SSNGLNPILTVLKKGLTLEARQIAAAVIFYLSSVKEYRKLIGENPEAIPALVELVKEGTT 362
             NGL P++ VLK GL+LEARQIAAA+IFYL SVKEYRKLIGEN + I  L EL KEGTT
Sbjct: 190 DHNGLKPVVYVLKNGLSLEARQIAAAIIFYLCSVKEYRKLIGENQDVIHGLAELAKEGTT 249

Query: 363 CGKKNATVAIFGLLLLPRNHRSVLAAGAVPALVDILAS-SEKDELVTESLAVLAVLAEDV 539
           CGKKNA VAIFGLLLLPRNH+ VL AGAV ALV IL +   K+ELVTE+LAVLA LAE+ 
Sbjct: 250 CGKKNAVVAIFGLLLLPRNHQRVLEAGAVHALVSILNTLCNKEELVTETLAVLAALAENF 309

Query: 540 DGAHAVLRASTLPLVTGKLRSSATSRAGKEHSVSILLSLCVNVGAEIVAVLAKDPSLMPL 719
           DGA+AVL AS LPL+TG LR SA SRA KEH VSILLSLCVN G ++  VLAKD +LMPL
Sbjct: 310 DGANAVLEASALPLITGLLR-SAPSRAAKEHCVSILLSLCVNGGVDVAGVLAKDVTLMPL 368

Query: 720 LYSLLTDGTSHAAKKGRFLIKVLQDFNETTTSGLKGSSVPRE 845
           LYSLLTDGTSHAAKK RFLIKVLQDFNET TS LKGS++ R+
Sbjct: 369 LYSLLTDGTSHAAKKARFLIKVLQDFNETATSRLKGSAILRQ 410


>ref|XP_003608976.1| U-box domain-containing protein [Medicago truncatula]
            gi|355510031|gb|AES91173.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 747

 Score =  395 bits (1014), Expect = e-107
 Identities = 212/275 (77%), Positives = 234/275 (85%), Gaps = 1/275 (0%)
 Frame = +3

Query: 3    AYEVRVLSRNSIFNRACLIEVGAVPPLLSLLVTDDRTTQENAISALLKLSKHTTGPENII 182
            AYE+R+L+R+SIFNRACLIEVG VPPLL LL T+D+TTQENAISALLKLSK+ TGPENII
Sbjct: 402  AYEIRLLTRSSIFNRACLIEVGTVPPLLDLLATEDKTTQENAISALLKLSKYATGPENII 461

Query: 183  SSNGLNPILTVLKKGLTLEARQIAAAVIFYLSSVKEYRKLIGENPEAIPALVELVKEGTT 362
              NGL P++ VLK GL+LEARQIAAA+IFYL SVKEYRKLIGEN + I  LVEL KEGTT
Sbjct: 462  DHNGLKPVVYVLKNGLSLEARQIAAAIIFYLCSVKEYRKLIGENQDVIHGLVELAKEGTT 521

Query: 363  CGKKNATVAIFGLLLLPRNHRSVLAAGAVPALVDILAS-SEKDELVTESLAVLAVLAEDV 539
            CGKKNA VAIFGLLLLPRNH+ VL AGAV ALV IL +   K+ELVTE+LAVLA LAE+ 
Sbjct: 522  CGKKNAVVAIFGLLLLPRNHQRVLEAGAVHALVSILNTLCNKEELVTETLAVLAALAENF 581

Query: 540  DGAHAVLRASTLPLVTGKLRSSATSRAGKEHSVSILLSLCVNVGAEIVAVLAKDPSLMPL 719
            DGA+AVL AS LPL+TG LR SA SRA KEH VSILLSLCVN G ++  VLAKD +LMPL
Sbjct: 582  DGANAVLEASALPLITGLLR-SAPSRAAKEHCVSILLSLCVNGGVDVAGVLAKDVTLMPL 640

Query: 720  LYSLLTDGTSHAAKKGRFLIKVLQDFNETTTSGLK 824
            LYSLLTDGTSHAAKK RFLIKVLQDFNET TS LK
Sbjct: 641  LYSLLTDGTSHAAKKARFLIKVLQDFNETATSRLK 675


>ref|XP_003527025.1| PREDICTED: U-box domain-containing protein 18-like [Glycine max]
          Length = 683

 Score =  358 bits (919), Expect = 1e-96
 Identities = 190/286 (66%), Positives = 230/286 (80%)
 Frame = +3

Query: 3    AYEVRVLSRNSIFNRACLIEVGAVPPLLSLLVTDDRTTQENAISALLKLSKHTTGPENII 182
            AYE+R+L+++S+FNRACL+E+G VPPLL LL  DDR  QE+AISAL+KLSKHT+G + II
Sbjct: 398  AYEIRLLAKSSVFNRACLVEMGTVPPLLDLLAADDRNLQESAISALMKLSKHTSGQKLII 457

Query: 183  SSNGLNPILTVLKKGLTLEARQIAAAVIFYLSSVKEYRKLIGENPEAIPALVELVKEGTT 362
             S GL PIL VLK+GL+LEAR +AAAVIFYLSS KEYRKLIGENP+ IPALVE+VKE TT
Sbjct: 458  ESRGLAPILKVLKRGLSLEARHVAAAVIFYLSSSKEYRKLIGENPDVIPALVEMVKEETT 517

Query: 363  CGKKNATVAIFGLLLLPRNHRSVLAAGAVPALVDILASSEKDELVTESLAVLAVLAEDVD 542
             GK N+ VAIFGLLL  +NH  VL+AGAVP LV+ LASS    LVT+SLAVL  LAE V+
Sbjct: 518  FGKNNSVVAIFGLLLRRKNHAIVLSAGAVPVLVNTLASSGNANLVTDSLAVLVALAESVE 577

Query: 543  GAHAVLRASTLPLVTGKLRSSATSRAGKEHSVSILLSLCVNVGAEIVAVLAKDPSLMPLL 722
            GA+A+LRA  LPLV  K+  SATSR+GKE+  SILL+LCVNVGAE+  VLAK+ S+MP L
Sbjct: 578  GAYALLRAEALPLV-AKILQSATSRSGKEYCASILLALCVNVGAEVTGVLAKEASVMPSL 636

Query: 723  YSLLTDGTSHAAKKGRFLIKVLQDFNETTTSGLKGSSVPRERSLHV 860
            YSLLTDGT HAAKK R LI V+ +F++   SG  GSSV R+R +++
Sbjct: 637  YSLLTDGTPHAAKKARALINVILEFSDKRFSGTVGSSVSRQRLVNL 682


>ref|XP_002318035.1| predicted protein [Populus trichocarpa]
            gi|224144077|ref|XP_002336107.1| predicted protein
            [Populus trichocarpa] gi|222858708|gb|EEE96255.1|
            predicted protein [Populus trichocarpa]
            gi|222872788|gb|EEF09919.1| predicted protein [Populus
            trichocarpa]
          Length = 684

 Score =  335 bits (860), Expect = 9e-90
 Identities = 174/287 (60%), Positives = 224/287 (78%), Gaps = 1/287 (0%)
 Frame = +3

Query: 3    AYEVRVLSRNSIFNRACLIEVGAVPPLLSLLVTD-DRTTQENAISALLKLSKHTTGPENI 179
            AYE+R+L++++IFNR+CLIE G + PL++LL +  D  TQE A+SALLKLSKHT G + I
Sbjct: 398  AYEIRLLAKSNIFNRSCLIEAGTILPLINLLSSSLDHYTQETALSALLKLSKHTCGKKEI 457

Query: 180  ISSNGLNPILTVLKKGLTLEARQIAAAVIFYLSSVKEYRKLIGENPEAIPALVELVKEGT 359
            I S GL PIL VLK+GL+LEA+Q+AAA IFYL+SVK Y KLIGE PE +PALVEL+K+GT
Sbjct: 458  IESGGLKPILAVLKRGLSLEAKQMAAATIFYLASVKSYGKLIGETPEVVPALVELIKDGT 517

Query: 360  TCGKKNATVAIFGLLLLPRNHRSVLAAGAVPALVDILASSEKDELVTESLAVLAVLAEDV 539
            TCGKKN  VAIFGLLL P NH+ VLA+G+VP L+D+L+SS   EL+ +SLAVLA++AE V
Sbjct: 518  TCGKKNGVVAIFGLLLHPANHQRVLASGSVPLLMDMLSSSNNIELIADSLAVLAIIAESV 577

Query: 540  DGAHAVLRASTLPLVTGKLRSSATSRAGKEHSVSILLSLCVNVGAEIVAVLAKDPSLMPL 719
            DG  A+L+ S L  +   LR S  SR  +E+ V++LLSLC N GAE +A+LAKD +LM  
Sbjct: 578  DGTLAILQTSALSTIPRILR-SLPSRTAREYCVTVLLSLCKNGGAEAIAILAKDHNLMSS 636

Query: 720  LYSLLTDGTSHAAKKGRFLIKVLQDFNETTTSGLKGSSVPRERSLHV 860
            LYSLLTDGTSH + K R LI++L  F+ET++SG+  S+VP ER +HV
Sbjct: 637  LYSLLTDGTSHGSSKARALIRILHKFHETSSSGMTASAVPCERPVHV 683


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