BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004808
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Me...   205   1e-50
gb|AFK42388.1| unknown [Medicago truncatula]                          203   4e-50
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...   188   1e-45
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   182   8e-44
ref|XP_002446548.1| hypothetical protein SORBIDRAFT_06g017930 [S...   182   8e-44

>ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 128

 Score =  205 bits (521), Expect = 1e-50
 Identities = 106/128 (82%), Positives = 107/128 (83%)
 Frame = -1

Query: 838 MSWATPDDLLLSTSLATYXXXXXXXXXXXXXXXXXXXRSFDQFANVVLEGACERVIVGDL 659
           MSWA PD+LLLSTSLATY                   RSFDQFANVVLEGACERVIVGDL
Sbjct: 1   MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60

Query: 658 YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEADIRKAQKAERDASDLKGTMRK 479
           YCDVPLGLYVIRGENVVLIGELDLGKEELP HMTCVSEADIRKAQKAERDASDLKGTMRK
Sbjct: 61  YCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRK 120

Query: 478 RMEFLDFD 455
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>gb|AFK42388.1| unknown [Medicago truncatula]
          Length = 128

 Score =  203 bits (517), Expect = 4e-50
 Identities = 105/128 (82%), Positives = 107/128 (83%)
 Frame = -1

Query: 838 MSWATPDDLLLSTSLATYXXXXXXXXXXXXXXXXXXXRSFDQFANVVLEGACERVIVGDL 659
           MSWA PD+LLLSTSLATY                   RSFDQFANVVL+GACERVIVGDL
Sbjct: 1   MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDL 60

Query: 658 YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEADIRKAQKAERDASDLKGTMRK 479
           YCDVPLGLYVIRGENVVLIGELDLGKEELP HMTCVSEADIRKAQKAERDASDLKGTMRK
Sbjct: 61  YCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRK 120

Query: 478 RMEFLDFD 455
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  188 bits (478), Expect = 1e-45
 Identities = 96/128 (75%), Positives = 104/128 (81%)
 Frame = -1

Query: 838 MSWATPDDLLLSTSLATYXXXXXXXXXXXXXXXXXXXRSFDQFANVVLEGACERVIVGDL 659
           MSWA PDD+ LSTSLATY                   RSFDQFANVVLEGACERVIVGDL
Sbjct: 1   MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60

Query: 658 YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEADIRKAQKAERDASDLKGTMRK 479
           YCD+ LGLYVIRGENVVLIGELDL KEELP HMTCVSEA+I++AQKAER+A+DLKG+MRK
Sbjct: 61  YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRK 120

Query: 478 RMEFLDFD 455
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  182 bits (463), Expect = 8e-44
 Identities = 93/128 (72%), Positives = 103/128 (80%)
 Frame = -1

Query: 838 MSWATPDDLLLSTSLATYXXXXXXXXXXXXXXXXXXXRSFDQFANVVLEGACERVIVGDL 659
           MSWA P+D+ LSTSLA+Y                   RSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 658 YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEADIRKAQKAERDASDLKGTMRK 479
           YCD+PLGLYVIRGENVVLIGELDL +EELP+HMT VS A+I++AQKAER+ASDLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 478 RMEFLDFD 455
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>ref|XP_002446548.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
           gi|195605684|gb|ACG24672.1| small nuclear
           ribonucleoprotein LSM1 [Zea mays]
           gi|195619498|gb|ACG31579.1| small nuclear
           ribonucleoprotein LSM1 [Zea mays]
           gi|241937731|gb|EES10876.1| hypothetical protein
           SORBIDRAFT_06g017930 [Sorghum bicolor]
           gi|413918442|gb|AFW58374.1| small nuclear
           ribonucleoprotein LSM1 [Zea mays]
          Length = 128

 Score =  182 bits (463), Expect = 8e-44
 Identities = 92/128 (71%), Positives = 101/128 (78%)
 Frame = -1

Query: 838 MSWATPDDLLLSTSLATYXXXXXXXXXXXXXXXXXXXRSFDQFANVVLEGACERVIVGDL 659
           MSW+ PDD+LLSTSLA +                    SFDQFANVVL+GACERVIVG+ 
Sbjct: 1   MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60

Query: 658 YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEADIRKAQKAERDASDLKGTMRK 479
           YCDVPLGLYVIRGENVVLIGELD  K+ELP HMTCVSEA+IRKA+KAER+A DLKGTMRK
Sbjct: 61  YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTMRK 120

Query: 478 RMEFLDFD 455
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128