BLASTX nr result

ID: Glycyrrhiza23_contig00004766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004766
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like...   374   e-101
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...   374   e-101
ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like...   371   e-100
ref|XP_004137848.1| PREDICTED: splicing factor 3A subunit 2-like...   371   e-100
emb|CBI30170.3| unnamed protein product [Vitis vinifera]              367   3e-99

>ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 349

 Score =  374 bits (961), Expect = e-101
 Identities = 185/229 (80%), Positives = 188/229 (82%)
 Frame = +2

Query: 122 MDREWXXXXXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 301
           MDREW            QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 302 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKPTLRKSVKIGRPGYRVTKQ 481
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPA PQPHKRK TLRK+VKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ 120

Query: 482 FDSDTKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 661
           +D +TKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK
Sbjct: 121 YDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 180

Query: 662 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFXXXXXXXXXXXXXSTANGT 808
           VPSTEIDKSTP FFSHWDPDSKMFTLQLYF             STANGT
Sbjct: 181 VPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQPASTANGT 229



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +2

Query: 1040 SGTNAGFNIGARPPSMPPPQGFPNQQMQS*GVHLLPPPSNMGQ 1168
            SGT+ GFN+GARPPSMPPPQGFP+Q MQ  GV L PPP NMGQ
Sbjct: 308  SGTS-GFNMGARPPSMPPPQGFPSQPMQGHGVRLPPPPPNMGQ 349


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score =  374 bits (960), Expect = e-101
 Identities = 184/229 (80%), Positives = 189/229 (82%)
 Frame = +2

Query: 122 MDREWXXXXXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 301
           MDREW            QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 302 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKPTLRKSVKIGRPGYRVTKQ 481
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKD+PA PQPHKRK TLRK+VKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ 120

Query: 482 FDSDTKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 661
           +D +TKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDK YQYLLFAAEPYEIVAFK
Sbjct: 121 YDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFK 180

Query: 662 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFXXXXXXXXXXXXXSTANGT 808
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYF             +TANGT
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPATTANGT 229



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +2

Query: 1040 SGTNAGFNIGARPPSMPPPQGFPNQQMQS*GVHLLPPPSNMGQ 1168
            SGT+ GFN+GARPPSMPPPQGFP+Q MQ  GV L PPP NMGQ
Sbjct: 309  SGTS-GFNMGARPPSMPPPQGFPSQPMQGQGVRLPPPPPNMGQ 350


>ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like [Cucumis sativus]
          Length = 341

 Score =  371 bits (953), Expect = e-100
 Identities = 182/229 (79%), Positives = 188/229 (82%)
 Frame = +2

Query: 122 MDREWXXXXXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 301
           MDREW            QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 302 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKPTLRKSVKIGRPGYRVTKQ 481
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+APA PQPHKRK ++RK+VKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 482 FDSDTKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 661
           FDS+TKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEI+AFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 662 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFXXXXXXXXXXXXXSTANGT 808
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYF               ANGT
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGT 229


>ref|XP_004137848.1| PREDICTED: splicing factor 3A subunit 2-like [Cucumis sativus]
          Length = 341

 Score =  371 bits (953), Expect = e-100
 Identities = 182/229 (79%), Positives = 188/229 (82%)
 Frame = +2

Query: 122 MDREWXXXXXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 301
           MDREW            QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 302 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKPTLRKSVKIGRPGYRVTKQ 481
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+APA PQPHKRK ++RK+VKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 482 FDSDTKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 661
           FDS+TKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEI+AFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 662 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFXXXXXXXXXXXXXSTANGT 808
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYF               ANGT
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGT 229


>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  367 bits (943), Expect = 3e-99
 Identities = 180/230 (78%), Positives = 188/230 (81%)
 Frame = +2

Query: 122 MDREWXXXXXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 301
           MDR+W            QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDRDWGSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 302 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKPTLRKSVKIGRPGYRVTKQ 481
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+APA PQPHKRK ++RK+VKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 482 FDSDTKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 661
           FD +TKQRSLLFQIEYPEIEDL KPRHRFMSS+EQRVQ FDKRYQYLLFAAEPYEI+AFK
Sbjct: 121 FDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFK 180

Query: 662 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFXXXXXXXXXXXXXSTANGTT 811
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYF             S ANGTT
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTT 230


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