BLASTX nr result

ID: Glycyrrhiza23_contig00004758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004758
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517076.1| PREDICTED: protein PAM68, chloroplastic-like...   142   4e-32
gb|ACU20343.1| unknown [Glycine max]                                  142   4e-32
ref|XP_003534311.1| PREDICTED: protein PAM68, chloroplastic-like...   136   2e-30
ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like...   134   6e-30
ref|XP_003612620.1| hypothetical protein MTR_5g027010 [Medicago ...   134   8e-30

>ref|XP_003517076.1| PREDICTED: protein PAM68, chloroplastic-like [Glycine max]
          Length = 208

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/103 (69%), Positives = 72/103 (69%)
 Frame = +1

Query: 1   PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKX 180
           PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGS  GW EAQ  
Sbjct: 133 PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQ-- 190

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXKNWPVFWQSLRGGGSRKN 309
                                    KNWPVFWQSLRGG SRKN
Sbjct: 191 -------------------------KNWPVFWQSLRGGESRKN 208


>gb|ACU20343.1| unknown [Glycine max]
          Length = 96

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/103 (69%), Positives = 72/103 (69%)
 Frame = +1

Query: 1   PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKX 180
           PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGS  GW EAQ  
Sbjct: 21  PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQ-- 78

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXKNWPVFWQSLRGGGSRKN 309
                                    KNWPVFWQSLRGG SRKN
Sbjct: 79  -------------------------KNWPVFWQSLRGGESRKN 96


>ref|XP_003534311.1| PREDICTED: protein PAM68, chloroplastic-like [Glycine max]
          Length = 211

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/104 (68%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKX 180
           P FYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGS  GW EAQ  
Sbjct: 135 PLFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQ-- 192

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXKNWPVFWQSLR-GGGSRKN 309
                                    KNWPVFWQS R GGGSRKN
Sbjct: 193 -------------------------KNWPVFWQSFRGGGGSRKN 211


>ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like [Cucumis sativus]
           gi|449509526|ref|XP_004163614.1| PREDICTED: protein
           PAM68, chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/102 (65%), Positives = 72/102 (70%)
 Frame = +1

Query: 1   PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKX 180
           PFFYYLKVGLKIDVP+WVP IVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQ  
Sbjct: 139 PFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQ-- 196

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXKNWPVFWQSLRGGGSRK 306
                                    KNWPVFW+S+ GG ++K
Sbjct: 197 -------------------------KNWPVFWKSIWGGSNKK 213


>ref|XP_003612620.1| hypothetical protein MTR_5g027010 [Medicago truncatula]
           gi|355513955|gb|AES95578.1| hypothetical protein
           MTR_5g027010 [Medicago truncatula]
          Length = 202

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/101 (65%), Positives = 70/101 (69%)
 Frame = +1

Query: 1   PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKX 180
           PFFYYLKVGLKIDVP WVPF+VSFFFFGSALLGVSYGIVS+SWDPLREGSLLGW EAQ  
Sbjct: 128 PFFYYLKVGLKIDVPNWVPFLVSFFFFGSALLGVSYGIVSASWDPLREGSLLGWTEAQ-- 185

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXKNWPVFWQSLRGGGSR 303
                                    KNWPVFW+SLRGG  +
Sbjct: 186 -------------------------KNWPVFWKSLRGGSQK 201


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