BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004740
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...   104   3e-20
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...    96   1e-17
ref|XP_003538006.1| PREDICTED: RNA and export factor-binding pro...    94   5e-17
ref|XP_002531375.1| RNA and export factor binding protein, putat...    92   2e-16
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...    81   2e-13

>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score =  104 bits (259), Expect = 3e-20
 Identities = 55/95 (57%), Positives = 58/95 (61%)
 Frame = +3

Query: 3   VELDGKPIKIEIVGTNIATHAVAPAANGAFGNLNGVPRSGQXXXXXXXXXXXXXXXXXXX 182
           V+LDGKP+K+EIVGTNIATHA  PA NG FGN  GVPRSGQ                   
Sbjct: 149 VQLDGKPMKVEIVGTNIATHAAPPAVNGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSI 208

Query: 183 XXXXXXXXXXXDEKVSVEDLDADLEKYHAEAMQLN 287
                      DEKVS EDLDADLEKYHAEAMQLN
Sbjct: 209 QRGRGRGRGGRDEKVSAEDLDADLEKYHAEAMQLN 243


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 54/96 (56%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3   VELDGKPIKIEIVGTNIATHAVAPAANGAFGNLNGVPRSGQ-XXXXXXXXXXXXXXXXXX 179
           V+LDGKP+KIEIVGTNI+T  VAPA NGA GN NGVPRSGQ                   
Sbjct: 152 VQLDGKPMKIEIVGTNISTPGVAPAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRD 211

Query: 180 XXXXXXXXXXXXDEKVSVEDLDADLEKYHAEAMQLN 287
                        EKVS +DLDADLEKYHAEAMQLN
Sbjct: 212 RGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247


>ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 53/96 (55%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3   VELDGKPIKIEIVGTNIATHAVAPAANGAFGNLNGVPRSGQ-XXXXXXXXXXXXXXXXXX 179
           V+LDGKP+KIEIVGTNI+T  VAPA NGA GN +GVPRSGQ                   
Sbjct: 152 VQLDGKPMKIEIVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRD 211

Query: 180 XXXXXXXXXXXXDEKVSVEDLDADLEKYHAEAMQLN 287
                        EKVS +DLDADLEKYHAEAMQLN
Sbjct: 212 RGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 52/95 (54%), Positives = 55/95 (57%)
 Frame = +3

Query: 3   VELDGKPIKIEIVGTNIATHAVAPAANGAFGNLNGVPRSGQXXXXXXXXXXXXXXXXXXX 182
           V+LDGKP+KIEIVGTNIAT A  PAANG FGN NG PR GQ                   
Sbjct: 154 VQLDGKPMKIEIVGTNIATPAATPAANGNFGNSNGAPRGGQ-GRGGTMRRPRGASSDGRG 212

Query: 183 XXXXXXXXXXXDEKVSVEDLDADLEKYHAEAMQLN 287
                       EKVS EDLDADLEKYH+EAMQ N
Sbjct: 213 FGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 50/96 (52%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3   VELDGKPIKIEIVGTNIAT-HAVAPAANGAFGNLNGVPRSGQXXXXXXXXXXXXXXXXXX 179
           V+LDGKP+KIEIVGTNIAT  AV P  NG FGN NG  RS Q                  
Sbjct: 150 VQLDGKPMKIEIVGTNIATPAAVPPVTNGTFGNSNGGLRSAQ--GRVGSQGRPRGGSGGR 207

Query: 180 XXXXXXXXXXXXDEKVSVEDLDADLEKYHAEAMQLN 287
                        EKVS EDLDADLEKYH+EAMQ+N
Sbjct: 208 GFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 243