BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004728
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...   501   e-139
ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like...   491   e-136
ref|XP_002516394.1| spliceosome associated protein, putative [Ri...   489   e-135
ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...   489   e-135
ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like...   488   e-135

>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
            gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
            [Medicago truncatula]
          Length = 379

 Score =  501 bits (1290), Expect = e-139
 Identities = 261/343 (76%), Positives = 270/343 (78%)
 Frame = -1

Query: 1419 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVAEELLWELFVQAGPVVNVYVPKDR 1240
            MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQ++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60

Query: 1239 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 1060
            VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61   VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 1059 PDVDEKLLYDTFSAFGVIATNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 880
            PDVDEKLLYDTFSAFGVI TNPKIMRDP+TGNSRGFGFISYDSFEASDSAIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180

Query: 879  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPNAPQNNGTI 700
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP++QKSRPHTLFASGPP+LPNAPQ NGTI
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI 240

Query: 699  ATPVPPRPFANGVXXXXXXXXXXXXXXXXXXXPMSVTGXXXXXXXXXXXXXXXXXXXXXX 520
              PVPPRPFANGV                   PM +                        
Sbjct: 241  PAPVPPRPFANGVAPPPIHVIQPPPPQAPAFQPMQMPPPGQQVWHQQQQGQPMMQQGMPP 300

Query: 519  XXXQFRXXXXXXXXXXXXXXXXXXXPRHLPPPTIMASQQQSVW 391
               QFR                   PR LPPP++MA QQQ VW
Sbjct: 301  PMQQFRPPHSMQMPPPPPPQGMQGPPRPLPPPSVMAGQQQ-VW 342


>ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 365

 Score =  491 bits (1263), Expect = e-136
 Identities = 258/343 (75%), Positives = 267/343 (77%)
 Frame = -1

Query: 1419 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVAEELLWELFVQAGPVVNVYVPKDR 1240
            MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60

Query: 1239 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 1060
            VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61   VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 1059 PDVDEKLLYDTFSAFGVIATNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 880
            PDVDEKLLYDTFSAFGVI TNPKIMRDP+TGNSRGFGFISYDSFEASDSAIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180

Query: 879  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPNAPQNNGTI 700
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP++QKSRPHTLFASGPPTLP+ PQ NG  
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSVPQANG-- 238

Query: 699  ATPVPPRPFANGVXXXXXXXXXXXXXXXXXXXPMSVTGXXXXXXXXXXXXXXXXXXXXXX 520
              PVPPRPFANGV                   PM V G                      
Sbjct: 239  VAPVPPRPFANGVAPPAIPALRPPPPQAAAFQPMPVPGQPTWHQQQPGQTLLPPAMPPPP 298

Query: 519  XXXQFRXXXXXXXXXXXXXXXXXXXPRHLPPPTIMASQQQSVW 391
               QFR                   PR LPPP++MASQ   VW
Sbjct: 299  QVQQFR---PPHPGMQQMPPPPQAPPRPLPPPSVMASQPPPVW 338


>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
            gi|223544492|gb|EEF46011.1| spliceosome associated
            protein, putative [Ricinus communis]
          Length = 376

 Score =  489 bits (1258), Expect = e-135
 Identities = 237/252 (94%), Positives = 246/252 (97%)
 Frame = -1

Query: 1419 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVAEELLWELFVQAGPVVNVYVPKDR 1240
            MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 1239 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 1060
            VTN HQGYGFVEFRSEEDADYAIK++NMIKL+GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61   VTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 1059 PDVDEKLLYDTFSAFGVIATNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 880
            PDVDEKLL+DTFSAFGVI TNPKIMRDPETGNSRGFGFISYDSF+ASD+AIEAMNGQYLC
Sbjct: 121  PDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLC 180

Query: 879  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPNAPQNNGTI 700
            NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLP+ PQ NGT+
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTV 240

Query: 699  ATPVPPRPFANG 664
              PVPPRPFANG
Sbjct: 241  GAPVPPRPFANG 252


>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score =  489 bits (1258), Expect = e-135
 Identities = 237/253 (93%), Positives = 244/253 (96%)
 Frame = -1

Query: 1419 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVAEELLWELFVQAGPVVNVYVPKDR 1240
            MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60

Query: 1239 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 1060
            VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61   VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120

Query: 1059 PDVDEKLLYDTFSAFGVIATNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 880
            PDVDEKLLYDTFSAFGVI TNPKIMRDP+TGNSRGFGF+SYDSFEASD+AIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180

Query: 879  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPNAPQNNGTI 700
            NRQITVSYAYKKDTKGERHGTPAERVLAASNPS+ KSRPHTLFASGPPTLPN PQ NG +
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM 240

Query: 699  ATPVPPRPFANGV 661
              P+PPRPFANGV
Sbjct: 241  GAPMPPRPFANGV 253


>ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 364

 Score =  488 bits (1256), Expect = e-135
 Identities = 240/253 (94%), Positives = 245/253 (96%)
 Frame = -1

Query: 1419 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVAEELLWELFVQAGPVVNVYVPKDR 1240
            MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ+ EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDR 60

Query: 1239 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 1060
            VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61   VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 1059 PDVDEKLLYDTFSAFGVIATNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 880
            PDVDEKLLYDTFSAFGVI TNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180

Query: 879  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPNAPQNNGTI 700
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP++QKSRPHTLFASGPPTLP+APQ NG  
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSAPQANG-- 238

Query: 699  ATPVPPRPFANGV 661
              PVPPRPF NGV
Sbjct: 239  VAPVPPRPFVNGV 251