BLASTX nr result
ID: Glycyrrhiza23_contig00004713
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00004713 (3908 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 2066 0.0 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1766 0.0 ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1731 0.0 ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|2... 1663 0.0 ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1647 0.0 >ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine max] Length = 1391 Score = 2066 bits (5353), Expect = 0.0 Identities = 1039/1235 (84%), Positives = 1131/1235 (91%), Gaps = 4/1235 (0%) Frame = +2 Query: 2 RWGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRVTNDLTSRILNPFQVL 181 R GY NGSVKK+P++L+I+HDCSKC N IV EL SALS +++ R T ++++RILNPFQVL Sbjct: 167 RCGYINGSVKKLPASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVL 226 Query: 182 SLFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKIIQ 361 SLF+RM DEDCELLYVA+RPEKLI+TN+ VPPIAIRPSV+MD S SNE+DITERLK IIQ Sbjct: 227 SLFKRMLDEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESLSNENDITERLKNIIQ 286 Query: 362 ANAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKGK 541 ANAVLRQELQES+ S +FLDGWD+LQ EVAQFINSDVRG+P+ MQ TK LAGFVQRLKGK Sbjct: 287 ANAVLRQELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGK 346 Query: 542 QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV 721 GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPIHMARILTYPERVTHHNIEKLRQCV Sbjct: 347 HGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCV 406 Query: 722 RNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSLH 901 RNGPDKYPGAR+L GG SWSLKV CRKR ADEL+ GDIVDRHLEDGDIVLFNRQPSLH Sbjct: 407 RNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLH 466 Query: 902 RMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMTVQNNL 1081 RMS+MCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLM V+NNL Sbjct: 467 RMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNL 526 Query: 1082 CTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPV 1261 CTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSY+GDGMDPIDLPTPAI+KPV Sbjct: 527 CTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPV 586 Query: 1262 ELWSGKQLFSILMRPHANVRVYVNLTVKEKTY--NTKLDDRKRELKTMCPNDGFVYFRNS 1435 ELWSGKQLFSI++RPHAN+RVYVNLTVKE+ Y + K+ D+K E KT+CPNDGFVYFRNS Sbjct: 587 ELWSGKQLFSIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNS 646 Query: 1436 ELISGQLGKVTLGNGNKDGLFSVLLRDYKAEAAAACMNRLAKLSARWIGNHGFSIGIDDV 1615 ELISGQ+GKVTLGNGNKDGLFSVLLRDY+A AAA+CMNRLAKLSARWIGNHGFSIGIDDV Sbjct: 647 ELISGQVGKVTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDV 706 Query: 1616 QPKEILINRKDETISDGYRKCDDFIEAFNKGKLELKAGCDAAQTLEALITGVLNGLRDTA 1795 QPKEILIN+KDETIS+GYR+CD IEAFNKGKLEL AGCDAAQTLE ITGVLNGLRDTA Sbjct: 707 QPKEILINKKDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTA 766 Query: 1796 GKVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGCRAANGFIDRSLPHFPK 1975 GKVCMQTLHWRNSPLIMSQCGSKGS INISQMVACVGQQSVGG R NGFIDRSLPHFP+ Sbjct: 767 GKVCMQTLHWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPR 826 Query: 1976 KAKTPAAKGFVANSFFSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLF 2155 K+KTPAAKGFVANSF+SGLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+LMK+LEDLF Sbjct: 827 KSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLF 886 Query: 2156 LHYDYTVRNAGGGIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLRSKAICPSDGDDVILS 2335 LHYDYTVRNAGG IVQFCYGDDGMDPAGMEGKNGKPLNFERLFL+SKAICP+D DD ILS Sbjct: 887 LHYDYTVRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILS 946 Query: 2336 SSDVCKVIHEKLSELGMSKLVEKGVSEDDIMSEVGSSADFINSLQSFVKDNTKLT-EAFT 2512 SSDV KV+HEKLSE MS+L EKGV EVG SADF+ SLQSF+KDN KLT E FT Sbjct: 947 SSDVSKVVHEKLSEFDMSRLAEKGV------FEVGFSADFVESLQSFIKDNAKLTEEGFT 1000 Query: 2513 VDNSKSLKNFIQRISGMTRKQLEVFLDICLSRYRSKKIEAGTPIGAIGAHSIGEPGTQMT 2692 ++S++LK F QRISG+TRKQL+VFL+ICLSRY SKK+EAG P+GA GAHSIGEPGTQMT Sbjct: 1001 DEHSQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMT 1060 Query: 2693 LKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILESDDNAKTARIVKGRIEKTN 2872 LKTFHFAGVASMNVTLGVPR+KEI+NG KKISTPIITAILE DDNA TARIVKGRIEKTN Sbjct: 1061 LKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTN 1120 Query: 2873 LGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKESILQTKKIKLKPEHIKIL 3052 LGQVAKSIKVVM+SRSAS+VITLDM+RIQDAHLNIDANIVKESIL+TKK KLKPEHIKIL Sbjct: 1121 LGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIKIL 1180 Query: 3053 DIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERVVLSKDEDKVTRVEKFKLL 3232 DIKKLEVVPQ VDRSKIHFQL+YLKNLLP+V VKGI T +RVV+SKD T+ EKF+LL Sbjct: 1181 DIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKD----TKAEKFRLL 1236 Query: 3233 VEGTGLREVMGVEGVDGRKTVSNHVVEVWETLGIEAARKCIIEEIKFTM-GSHGMSIDIR 3409 VEGTG REVMGVEG+DGRKTVSNH+ EV +TLGIEAAR+ I++EIK+TM +HGM+IDIR Sbjct: 1237 VEGTGFREVMGVEGIDGRKTVSNHIHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIR 1296 Query: 3410 HIMLLADLMTFRGQVLGMTRFGIQKMGKSVLMLASFEKTSDHLFDASLHGRDDPIEGVSE 3589 H+MLLAD+MT G +LG+ RFGI KMGKSVLMLASFE+T+D LF AS+ GRDD I GVSE Sbjct: 1297 HMMLLADMMTATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSE 1356 Query: 3590 CIIMGIPIQIGTGMIKVKQRLDPPELPQGTDPILS 3694 IIMGIPIQIGTGMIKVKQRLDPPELP GT PILS Sbjct: 1357 SIIMGIPIQIGTGMIKVKQRLDPPELPHGTSPILS 1391 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis sativus] Length = 1400 Score = 1766 bits (4573), Expect = 0.0 Identities = 895/1253 (71%), Positives = 1031/1253 (82%), Gaps = 22/1253 (1%) Frame = +2 Query: 2 RWGYSNGSVKKVPSALSIVHDCSKCNN-DIVAELQSALSHVREYRVTNDLTSRILNPFQV 178 R GY NGSVKK S L I+H ++ + +V+E A Y V+ND ILNPF+V Sbjct: 172 RCGYLNGSVKKAVSMLGILHYRARSKDAGVVSEDLRA-----PYNVSND----ILNPFRV 222 Query: 179 LSLFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKII 358 L LF+RM DEDCELL++++RPEKLIITN+ VPPIAIRPSVIMDGSQSNE+DITERLK+II Sbjct: 223 LCLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRII 282 Query: 359 QANAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKG 538 Q NA + QEL S+ + L+ WDMLQ EVAQ INSDVRG+P+ MQ +KPLAGFVQRLKG Sbjct: 283 QQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKG 342 Query: 539 KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 718 KQGRFRGNL GKRVE+TGRTVISPDPNLKITEVA+PIHMARILTYPERVT HNIEKLRQC Sbjct: 343 KQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQC 402 Query: 719 VRNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSL 898 V NGPDKYPGAR+L H G SL +S RKRLADELK+G+IV+RHLEDGD+VLFNRQPSL Sbjct: 403 VSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSL 462 Query: 899 HRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMTVQNN 1078 HRMS+MCHR R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAILLM VQNN Sbjct: 463 HRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNN 522 Query: 1079 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKP 1258 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYMGDGMD +DLPTPA++KP Sbjct: 523 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKP 582 Query: 1259 VELWSGKQLFSILMRPHANVRVYVNLTVKEKTYNTKLDDRKRELKTMCPNDGFVYFRNSE 1438 +ELW+GKQLFS+L+RPHA+++VY+NLTVKEK+Y +K+ ++E +TMCPNDGFVYFRNSE Sbjct: 583 IELWTGKQLFSVLVRPHASMKVYLNLTVKEKSY-SKVKGNEKERETMCPNDGFVYFRNSE 641 Query: 1439 LISGQLGKVTLGNGNKDGLFSVLLRDYKAEAAAACMNRLAKLSARWIGNHGFSIGIDDVQ 1618 LISGQ+GK TLGNGNKDGL+SVLLRDYKA AAA CMNRLAKLSARWIGNHGFSIGIDDVQ Sbjct: 642 LISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQ 701 Query: 1619 PKEILINRKDETISDGYRKCDDFIEAFNKGKLELKAGCDAAQTLEALITGVLNGLRDTAG 1798 P + L+ +K TI +GYR CD I FN G L +AGCDAAQ+LE+ IT +LNG+R+ Sbjct: 702 PGDQLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATA 761 Query: 1799 KVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGCRAANGFIDRSLPHFPKK 1978 VCMQ LHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGG RA +GFIDRSLPHF +K Sbjct: 762 NVCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRK 821 Query: 1979 AKTPAAKGFVANSFFSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFL 2158 AKTPAAKGFVANSF+SGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL + Sbjct: 822 AKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI 881 Query: 2159 HYDYTVRNAGGGIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLRSKAICPSDGDDVILSS 2338 HYD +VRNAGG IVQFCYGDDGMDPA MEGK+G PLNFERLFL++KA CPSDG+ + Sbjct: 882 HYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKI---- 937 Query: 2339 SDVCKVIHEKLSELGMSKLVEKGVSEDDIMSEVGSSADFINSLQSFVK------------ 2482 LS S+ VE +S+DD E G S F+ SL+ F+ Sbjct: 938 ----------LSPSEFSETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGT 987 Query: 2483 ---DNTKLTEAFTV-----DNSKSLKNFIQRISGMTRKQLEVFLDICLSRYRSKKIEAGT 2638 DN + + DN +Q I+G+T +QL+VFLD CLSRY +KKIEAGT Sbjct: 988 LLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGT 1047 Query: 2639 PIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILES 2818 IGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPI+TA L Sbjct: 1048 AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTH 1107 Query: 2819 DDNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKE 2998 DDN AR+VK RIEKTNLGQ+AK I++VMSSRSA I I LDME+I+DA L +DAN+VK+ Sbjct: 1108 DDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQ 1167 Query: 2999 SILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERV 3178 +IL T K+KLK EHI +LD +KL V+PQ DR+K+HF L++LKN+LP V VKGI T R Sbjct: 1168 AILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRA 1227 Query: 3179 VLSKDEDKVTRVEKFKLLVEGTGLREVMGVEGVDGRKTVSNHVVEVWETLGIEAARKCII 3358 V+ +++DK +KF LLVEGTGL+ VMG EGVDG T SNH++EV + LGIEAARKCII Sbjct: 1228 VIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCII 1287 Query: 3359 EEIKFTMGSHGMSIDIRHIMLLADLMTFRGQVLGMTRFGIQKMGKSVLMLASFEKTSDHL 3538 EEIK+TM SHGMSIDIRH+MLL DLMTFRG+VLG+TRFGIQKM KSVLMLASFEKT+DHL Sbjct: 1288 EEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHL 1347 Query: 3539 FDASLHGRDDPIEGVSECIIMGIPIQIGTGMIKVKQRLD-PPELPQGTDPILS 3694 F+AS++GRDD IEGVSEC+IMGIP+ +GTGM+KV+QR+ P +LP G ILS Sbjct: 1348 FNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAILS 1400 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 1731 bits (4484), Expect = 0.0 Identities = 890/1244 (71%), Positives = 1034/1244 (83%), Gaps = 13/1244 (1%) Frame = +2 Query: 2 RWGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRVTNDLTSRILNPFQVL 181 R GY NG VKK S L I+HD SK + + E SA+SH +E + + + ILNP +VL Sbjct: 168 RCGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVD-ILNPVKVL 226 Query: 182 SLFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDG-SQSNEDDITERLKKII 358 SLF+RM DEDC+LL +A+RPEKL++TNI VPPIAIRPSV MDG +QSNE+D+TERLK+II Sbjct: 227 SLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRII 286 Query: 359 QANAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKG 538 QANA L QELQ++ + + L GWD LQ EVAQ+INSDVRGVP MQ+ +PL+GFVQRLKG Sbjct: 287 QANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKG 346 Query: 539 KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 718 KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA+IL+YPERV+HHNIEKLRQC Sbjct: 347 KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQC 406 Query: 719 VRNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSL 898 + NGP KYPGA+L+ + G SL S RKR ADELK+G IV+RHLEDGD+VLFNRQPSL Sbjct: 407 ILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSL 466 Query: 899 HRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMTVQNN 1078 HRMS+MCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LM VQNN Sbjct: 467 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 526 Query: 1079 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKP 1258 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYMGDGMD +DLPTPAIIKP Sbjct: 527 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKP 586 Query: 1259 VELWSGKQLFSILMRPHANVRVYVNLTVKEKTYNTKLDDRKRELKTMCPNDGFVYFRNSE 1438 VELW+GKQLF++L+RPHANVRVY+NLTV EKTYN ++R +TMCP+DGFVYFRNSE Sbjct: 587 VELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYN-----KRRGKETMCPSDGFVYFRNSE 641 Query: 1439 LISGQLGKVTLGNGNKDGLFSVLLRDYKAEAAAACMNRLAKLSARWIGNHGFSIGIDDVQ 1618 LISGQLGK TLGNGNKDGLFSVLLRDY A AAAACMNRLAKLSARWIGNHGFSIGIDDVQ Sbjct: 642 LISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQ 701 Query: 1619 PKEILINRKDETISDGYRKCDDFIEAFNKGKLELKAGCDAAQTLEALITGVLNGLRDTAG 1798 P +L ++K + I +GY C + I+ +NKGKL+L+ GC+AAQTLEA ITGVLN +R+T Sbjct: 702 PGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTA 761 Query: 1799 KVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGCRAANGFIDRSLPHFPKK 1978 VCM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG RA +GFIDR+LPHFP+K Sbjct: 762 NVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRK 821 Query: 1979 AKTPAAKGFVANSFFSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFL 2158 +KTP AKGFVA+SF++GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDL + Sbjct: 822 SKTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSI 881 Query: 2159 HYDYTVRNAGGGIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLRSKAICPSDGDDVILSS 2338 YD TVRNA G IVQF YGDDGMDPA MEGK+G PLNF RLFL+ KA CP+ G++ LS+ Sbjct: 882 QYDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPA-GENASLSA 940 Query: 2339 SDVCKVIHEKLSELGMSKLVEKGVSEDDIMSEVGSSADFINSLQSFVKD------NTKLT 2500 + E + +L E S + G S F +L F+++ NT+ Sbjct: 941 LQI---------EETVKRLKEHNTSAE------GCSDAFKTNLSGFLEECKEKFKNTREA 985 Query: 2501 -----EAFTVDNSKSLKNFIQRISGMTRKQLEVFLDICLSRYRSKKIEAGTPIGAIGAHS 2665 E +N + F + ISG+T KQL+VFLD C+SRY+ K+IEAGT IGAIGAHS Sbjct: 986 LGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHS 1045 Query: 2666 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILESDDNAKTARI 2845 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPIITA LE ++N KTAR+ Sbjct: 1046 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARM 1105 Query: 2846 VKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKESILQTKKIK 3025 VKGRIE+T LGQVAKSIK+V++SR A I + LDME IQ + L+ID+NIV+ESIL+ ++IK Sbjct: 1106 VKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIK 1165 Query: 3026 LKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERVVLSKDEDKV 3205 LK +HIK+LD KLEV PQ DRS IHF+L+ LKNLLP+V VKGI T ER V++KD +KV Sbjct: 1166 LKQQHIKVLDAGKLEVHPQ-GDRSTIHFELHALKNLLPTVVVKGIETVERAVINKD-NKV 1223 Query: 3206 TRVEKFKLLVEGTGLREVMGVEGVDGRKTVSNHVVEVWETLGIEAARKCIIEEIKFTMGS 3385 K+ LLVEGTGL+ VMG EGV GR+T SNH++EV +TLGIEAARKCII EI++TM S Sbjct: 1224 ----KYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMAS 1279 Query: 3386 HGMSIDIRHIMLLADLMTFRGQVLGMTRFGIQKMGKSVLMLASFEKTSDHLFDASLHGRD 3565 HGMSIDIRH+MLLADLMTFRG+VLG+TRFGIQKM KSVLMLASFEKT+DHLF+AS+ GRD Sbjct: 1280 HGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRD 1339 Query: 3566 DPIEGVSECIIMGIPIQIGTGMIKVKQRLDP-PELPQGTDPILS 3694 D IEGVSECIIMGIP+Q+GTG++KV+QRL PEL G DPI+S Sbjct: 1340 DKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPIIS 1383 >ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1| predicted protein [Populus trichocarpa] Length = 1394 Score = 1663 bits (4307), Expect = 0.0 Identities = 860/1241 (69%), Positives = 1001/1241 (80%), Gaps = 25/1241 (2%) Frame = +2 Query: 2 RWGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRVTNDLTSRILNPFQVL 181 R GY NG VKK S + I+HD SK + + E +SA+ H RE R L + ILNP +VL Sbjct: 170 RCGYMNGMVKKAGSVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVL 229 Query: 182 SLFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKIIQ 361 SLF+RM +EDCELLY+ RPEKLIIT I+VPPI+IRPSV +GSQSNE+DITERLK+IIQ Sbjct: 230 SLFQRMVEEDCELLYLQGRPEKLIITTIAVPPISIRPSVFTEGSQSNENDITERLKQIIQ 289 Query: 362 ANAVLRQELQESSGS-LRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKG 538 NA LR EL E + +++L GWD LQ V +INSDVR +P MQ +PL+GFVQRL G Sbjct: 290 FNAKLRLELLEGRRTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTG 348 Query: 539 KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 718 KQGRFR NL+GKRVE+TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC Sbjct: 349 KQGRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 408 Query: 719 VRNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSL 898 V NG KYPGAR++T+ G S L + RKR+A+ELK G IV RHLEDGD+VLFNRQPSL Sbjct: 409 VNNGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSL 468 Query: 899 HRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMTVQNN 1078 HRMS+MCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA LLM VQNN Sbjct: 469 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNN 528 Query: 1079 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKP 1258 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYM DGMD +DLPTP+++KP Sbjct: 529 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKP 588 Query: 1259 VELWSGKQLFSILMRPHANVRVYVNLTVKEKTYNTKLDDRKRELKTMCPNDGFVYFRNSE 1438 +ELW+GKQLFS+L+RPHANVRVYVNL +KEK Y+ + K+E +TMCPNDG+VYFRNSE Sbjct: 589 IELWTGKQLFSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSE 648 Query: 1439 LISGQLGKVTLGNGNKDGLFSVLLRDYKAEAAAACMNRLAKLSARWIGNHGFSIGIDDVQ 1618 LISGQLGK TLGNGNKDGL+S+LLRDY A AAA CMNRLAKLSARWIGNHGFSIGIDDVQ Sbjct: 649 LISGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQ 708 Query: 1619 PKEILINRKDETISDGYRKCDDFIEAFNKGKLELKAGCDAAQTLEALITGVLNGLRDTAG 1798 P + LI+ K +TIS+GYR C+ I +N G+L LK+GCDA QTLE IT LN LR+ AG Sbjct: 709 PGKKLIDEKGKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAG 768 Query: 1799 KVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGCRAANGFIDRSLPHFPKK 1978 VCM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG RA +GFIDRSLPHFP+K Sbjct: 769 DVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRK 828 Query: 1979 AKTPAAKGFVANSFFSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFL 2158 +KTPAAKGFVANSF+SGLSATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + Sbjct: 829 SKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCV 888 Query: 2159 HYDYTVRNAGGGIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLRSKAICPSDGDDVILSS 2338 YD TV++AGGGIVQF YGDDG+DPA MEGK G PLNF+RLF++ KA C ++ +D LS Sbjct: 889 QYDNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAE-EDEYLSP 947 Query: 2339 SDVCKVIHEKLSELGMSKLVEKGVSEDDIMSEVGSSADFINSLQSFVKDNT-------KL 2497 SD+ ++ S L++ + D I SE F SL SF+ D KL Sbjct: 948 SDISNIV--------QSLLLKHNGTLDGICSE-----SFRKSLSSFLGDQAKRLECLMKL 994 Query: 2498 TEAFTVDNSKSLKN-------------FIQRISGMTRKQLEVFLDICLSRYRSKKIEAGT 2638 + V+N +++KN Q++SG+T KQLEVFL CL RY K+IE GT Sbjct: 995 VDGVEVENFENIKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGT 1054 Query: 2639 PIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILES 2818 IGAIGA SIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAK+ISTPIIT LE Sbjct: 1055 AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEH 1114 Query: 2819 DDNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKE 2998 + N ARI+KGRI+KT LGQVAKSIK+VM+SRSAS+ +TLDM+ I++A L++DANIV+E Sbjct: 1115 NSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRE 1174 Query: 2999 SILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERV 3178 IL+T KIK K + I +L+ KLEV P DR+K+HF+L+ LKN+LP+V VKGI T ERV Sbjct: 1175 LILETPKIKRKLQRINVLEDGKLEVFPG-GDRNKLHFELHSLKNMLPAVVVKGIKTVERV 1233 Query: 3179 VLSK----DEDKVTRVEKFKLLVEGTGLREVMGVEGVDGRKTVSNHVVEVWETLGIEAAR 3346 V+++ D + K+ + VEG GL+ VMG EGVDGRKT SNH++EV ETLGIEAAR Sbjct: 1234 VIAQKKLDDAENDQGGPKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAAR 1293 Query: 3347 KCIIEEIKFTMGSHGMSIDIRHIMLLADLMTFRGQVLGMTRFGIQKMGKSVLMLASFEKT 3526 KCII+EIK TM SHGMSIDIRH+MLLAD+MT RG VLG+TRFGIQKM KSVLMLASFEKT Sbjct: 1294 KCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKT 1353 Query: 3527 SDHLFDASLHGRDDPIEGVSECIIMGIPIQIGTGMIKVKQR 3649 SDHLF+AS+ G+DD IEGVSECIIMGIP+ IGTG++K++QR Sbjct: 1354 SDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKIQQR 1394 >ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] Length = 1383 Score = 1647 bits (4264), Expect = 0.0 Identities = 861/1247 (69%), Positives = 1007/1247 (80%), Gaps = 16/1247 (1%) Frame = +2 Query: 2 RWGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRVTNDLTSRILNPFQVL 181 R G NG VKK S LSI+HD +K + + E +SA++H +E R L + IL P +VL Sbjct: 141 RCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKESRAPISLATYILTPVKVL 200 Query: 182 SLFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKIIQ 361 SLF+R+ +EDCE+L + DRPEKLIITNI+VPPI+IRPSV DG QSNE+DITERLK+IIQ Sbjct: 201 SLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDGLQSNENDITERLKQIIQ 260 Query: 362 ANAVLRQELQESSGSL-RFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKG 538 ANA LR EL E S+ ++LD WD LQ VA ++NSDVR VP ++ KPL+GFVQRLKG Sbjct: 261 ANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-VPNNVEVGKPLSGFVQRLKG 319 Query: 539 KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 718 KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPIHMARIL+YPERV+HHNIEKLRQ Sbjct: 320 KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQL 379 Query: 719 VRNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSL 898 V NGP KYPGA + + G S L S RK +A+EL FG IVDRHLEDGD+VLFNRQPSL Sbjct: 380 VSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSL 439 Query: 899 HRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMTV-QN 1075 HRMS+MCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLM V QN Sbjct: 440 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVSQN 499 Query: 1076 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIK 1255 NLCTPKNGEILVASTQDFLTSSFLITR+DTFYDR+ FSL+CSYM DGMD IDLPTPAI+K Sbjct: 500 NLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMNDGMDLIDLPTPAILK 559 Query: 1256 PVELWSGKQLFSILMRPHANVRVYVNLTVKEKTYNTKLDDRKRELKTMCPNDGFVYFRNS 1435 P+ELW+GKQLFS+L+RP+ANVRVYVNL V+EK Y+ KRE +TMCPNDGFVY RNS Sbjct: 560 PIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDGFVYIRNS 619 Query: 1436 ELISGQLGKVTLGNGNKDGLFSVLLRDYKAEAAAACMNRLAKLS--ARWIGNHGFSIGID 1609 ELISGQLGK TLGNGNKDGL+S+LLRDY AAA CMNRLAKL ARWIGNHGFSIGID Sbjct: 620 ELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNHGFSIGID 679 Query: 1610 DVQPKEILINRKDETISDGYRKCDDFIEAFNKGKLELKAGCDAAQTLEALITGVLNGLRD 1789 DVQP + LI+ K +TIS+GY++CD IE +N+GKL LK GCDA QTLE+ IT LN LR+ Sbjct: 680 DVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLRE 739 Query: 1790 TAGKVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGCRAANGFIDRSLPHF 1969 AG VCM+ LHWRNSPLIMSQCGSKGS INISQMVACVGQQSVGG RA +GFIDRSLPHF Sbjct: 740 EAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHF 799 Query: 1970 PKKAKTPAAKGFVANSFFSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALED 2149 P+K+KTPAAKGFVANSF+SGL ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+K LED Sbjct: 800 PRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLED 859 Query: 2150 LFLHYDYTVRNAGGGIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLRSKAICPSDGDDVI 2329 L + YD TVRNA G IVQF YGDDG+DPA MEGK G PLN +RLF + KA CP +D Sbjct: 860 LSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREED-Y 918 Query: 2330 LSSSDVCKVIHEKL--SELGMSKLVEKGVSEDDIMSEVGSSADFINSLQSF---VKDNT- 2491 LS D+ V+ L ++ + + + + + S +GS A + S+ V+D T Sbjct: 919 LSPLDISDVVENLLLKHDMALGGICSEAFKK-SLTSFLGSHAKRLESMMKLADGVEDPTS 977 Query: 2492 -KLTEAFTVDNSKSLKNFIQRISGMTRKQLEVFLDICLSRYRSKKIEAGTPIGAIGAHSI 2668 + NSK ++ +I G++ +Q+EVF+ C++RY K++E GT IGAIGA SI Sbjct: 978 ENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSI 1037 Query: 2669 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILESDDNAKTARIV 2848 GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAKKISTPIITA LE + N ARI Sbjct: 1038 GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIA 1097 Query: 2849 KGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKESILQTKKIKL 3028 KGRI+KT LGQVAKSIK+VM+SRSAS+VITLDM+ IQ+A L++DANIVKE+IL+T +IKL Sbjct: 1098 KGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKL 1157 Query: 3029 KPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERVVLS--KDEDK 3202 KP+HIK+LD +KLEV+P + DR ++HF+L+ LKNLLPS+ V+GI T ER V++ K + K Sbjct: 1158 KPQHIKVLDTRKLEVIP-LGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKKHDGK 1216 Query: 3203 VTRVE--KFKLLVEGTGLREVMGVEGVDGRKTVSNHVVEVWETLGIEAARKCIIEEIKFT 3376 E + +LVEG GL VMG EGVDG KT SNHV+EV + LGIEAARKCII+EI T Sbjct: 1217 ANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQT 1276 Query: 3377 MGSHGMSIDIRHIMLLADLMTFRGQVLGMTRFGIQKMGKSVLMLASFEKTSDHLFDASLH 3556 M HGMSIDIRH+MLL DLMTF+G+VLG+TRFGIQKM KSVLMLASFEKT+DHL+ A++ Sbjct: 1277 MEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVF 1336 Query: 3557 GRDDPIEGVSECIIMGIPIQIGTGMIKVKQRLDPPE-LPQGTDPILS 3694 GRDD IEGVSECIIMGIP+QIGTG++KV+QR+DPP L G+D I+S Sbjct: 1337 GRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGSDSIIS 1383