BLASTX nr result

ID: Glycyrrhiza23_contig00004670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004670
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548630.1| PREDICTED: 39S ribosomal protein L46, mitoch...   431   e-118
ref|XP_003546166.1| PREDICTED: 39S ribosomal protein L46, mitoch...   427   e-117
ref|XP_003629838.1| 39S ribosomal protein L46 [Medicago truncatu...   427   e-117
gb|ACU19535.1| unknown [Glycine max]                                  426   e-117
ref|XP_003534686.1| PREDICTED: 39S ribosomal protein L46, mitoch...   425   e-116

>ref|XP_003548630.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Glycine
           max]
          Length = 228

 Score =  431 bits (1109), Expect = e-118
 Identities = 209/228 (91%), Positives = 220/228 (96%)
 Frame = +2

Query: 203 MKMSLVRPLVTRRGFSTSSEKMVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRY 382
           MKMSLV PL+TRRGFSTSSE +VASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRY
Sbjct: 1   MKMSLVWPLLTRRGFSTSSENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRY 60

Query: 383 PDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLFGNAYGAPSG 562
           PDEFLDKSDARGKGDYQIDYVPAPR+TEAD++NDRRSLQRALDRRLYLLL+GNAYGAPSG
Sbjct: 61  PDEFLDKSDARGKGDYQIDYVPAPRITEADQSNDRRSLQRALDRRLYLLLYGNAYGAPSG 120

Query: 563 KPVWHFPEKVYESENTMRECAESALNSVIGDLSNTYFVGNAPMAHMVVQPKEDPSGSTPF 742
           KPVWHFPEKVYESE+TMR+CAESAL SVIGDLSNTYFVGNAPMAHMVVQP E+ SGST F
Sbjct: 121 KPVWHFPEKVYESEDTMRKCAESALKSVIGDLSNTYFVGNAPMAHMVVQPTENQSGSTSF 180

Query: 743 KKFFFKSQVIAKNKFDIGKCEDFVWVTKDELMDYFPEQAEFFNKMIIS 886
           K+FFFKSQVIAKNKFDIGKCEDFVWVTKDEL +YFPEQAEF NKMIIS
Sbjct: 181 KRFFFKSQVIAKNKFDIGKCEDFVWVTKDELTEYFPEQAEFLNKMIIS 228


>ref|XP_003546166.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Glycine
           max]
          Length = 230

 Score =  427 bits (1098), Expect = e-117
 Identities = 210/230 (91%), Positives = 219/230 (95%), Gaps = 2/230 (0%)
 Frame = +2

Query: 203 MKMSLV--RPLVTRRGFSTSSEKMVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR 376
           MKMSLV  RPL+TRRGFS SSE +VASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR
Sbjct: 1   MKMSLVQLRPLLTRRGFSASSENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR 60

Query: 377 RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLFGNAYGAP 556
           RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLL+GNAYGAP
Sbjct: 61  RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGNAYGAP 120

Query: 557 SGKPVWHFPEKVYESENTMRECAESALNSVIGDLSNTYFVGNAPMAHMVVQPKEDPSGST 736
           SGKPVWHFPEKVYESE+TMR+CAESAL SV+GDLSNTYFVGNAPMAHMVVQP ED S ST
Sbjct: 121 SGKPVWHFPEKVYESEDTMRKCAESALKSVLGDLSNTYFVGNAPMAHMVVQPTEDQSRST 180

Query: 737 PFKKFFFKSQVIAKNKFDIGKCEDFVWVTKDELMDYFPEQAEFFNKMIIS 886
            FK+FFFKSQVIAKNKF+IGKCED VWVTKDELM+YFPEQAEF NKMIIS
Sbjct: 181 SFKRFFFKSQVIAKNKFNIGKCEDHVWVTKDELMEYFPEQAEFLNKMIIS 230


>ref|XP_003629838.1| 39S ribosomal protein L46 [Medicago truncatula]
           gi|355523860|gb|AET04314.1| 39S ribosomal protein L46
           [Medicago truncatula]
          Length = 279

 Score =  427 bits (1098), Expect = e-117
 Identities = 210/230 (91%), Positives = 221/230 (96%), Gaps = 1/230 (0%)
 Frame = +2

Query: 200 RMKM-SLVRPLVTRRGFSTSSEKMVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR 376
           RMKM SLVRPL+ RRGFSTSSEKMVASVLFERLPVVIPKIDP VYAFQEFSFRWRQQYQR
Sbjct: 50  RMKMMSLVRPLLMRRGFSTSSEKMVASVLFERLPVVIPKIDPNVYAFQEFSFRWRQQYQR 109

Query: 377 RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLFGNAYGAP 556
           RYPDEFLD+SDARGKGDYQIDYVPAPR+TEADK NDRRSLQRALDRRLYLLLFG+AYGAP
Sbjct: 110 RYPDEFLDRSDARGKGDYQIDYVPAPRITEADKQNDRRSLQRALDRRLYLLLFGDAYGAP 169

Query: 557 SGKPVWHFPEKVYESENTMRECAESALNSVIGDLSNTYFVGNAPMAHMVVQPKEDPSGST 736
           SGKPVWHFPEKVYESE+TMR+CAESAL SV+GDLSNTYFVGNAPMAH+VVQPKE+ +GST
Sbjct: 170 SGKPVWHFPEKVYESEDTMRKCAESALKSVLGDLSNTYFVGNAPMAHIVVQPKEEQTGST 229

Query: 737 PFKKFFFKSQVIAKNKFDIGKCEDFVWVTKDELMDYFPEQAEFFNKMIIS 886
            FKKFFFKSQVIAKNKFDIGK EDFVWVTKDELM+YFPEQAEF NKMIIS
Sbjct: 230 SFKKFFFKSQVIAKNKFDIGKGEDFVWVTKDELMEYFPEQAEFLNKMIIS 279


>gb|ACU19535.1| unknown [Glycine max]
          Length = 230

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/230 (90%), Positives = 218/230 (94%), Gaps = 2/230 (0%)
 Frame = +2

Query: 203 MKMSLV--RPLVTRRGFSTSSEKMVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR 376
           MKMSLV  RPL+TRRGFS SSE +VASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR
Sbjct: 1   MKMSLVQLRPLLTRRGFSASSENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQR 60

Query: 377 RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLFGNAYGAP 556
           RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLL+GNAYGAP
Sbjct: 61  RYPDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGNAYGAP 120

Query: 557 SGKPVWHFPEKVYESENTMRECAESALNSVIGDLSNTYFVGNAPMAHMVVQPKEDPSGST 736
           SGKPVWHFPEKVYESE+TMR+CAESAL SV+GDLSNTYFVGN PMAHMVVQP ED S ST
Sbjct: 121 SGKPVWHFPEKVYESEDTMRKCAESALKSVLGDLSNTYFVGNTPMAHMVVQPTEDQSRST 180

Query: 737 PFKKFFFKSQVIAKNKFDIGKCEDFVWVTKDELMDYFPEQAEFFNKMIIS 886
            FK+FFFKSQVIAKNKF+IGKCED VWVTKDELM+YFPEQAEF NKMIIS
Sbjct: 181 SFKRFFFKSQVIAKNKFNIGKCEDHVWVTKDELMEYFPEQAEFLNKMIIS 230


>ref|XP_003534686.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Glycine
           max]
          Length = 228

 Score =  425 bits (1093), Expect = e-116
 Identities = 207/228 (90%), Positives = 217/228 (95%)
 Frame = +2

Query: 203 MKMSLVRPLVTRRGFSTSSEKMVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRY 382
           MKMSLVRPL+T+RGFSTSSE +VASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRY
Sbjct: 1   MKMSLVRPLLTKRGFSTSSENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRY 60

Query: 383 PDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLFGNAYGAPSG 562
           PDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLL+G AYGAPSG
Sbjct: 61  PDEFLDKSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGIAYGAPSG 120

Query: 563 KPVWHFPEKVYESENTMRECAESALNSVIGDLSNTYFVGNAPMAHMVVQPKEDPSGSTPF 742
           KPVWHFPEKVYESE+ MR+CAESAL SV+GDLSNTYFVGNAPMAH VVQP ED S ST F
Sbjct: 121 KPVWHFPEKVYESEDNMRKCAESALKSVLGDLSNTYFVGNAPMAHTVVQPTEDQSRSTSF 180

Query: 743 KKFFFKSQVIAKNKFDIGKCEDFVWVTKDELMDYFPEQAEFFNKMIIS 886
           K+FFFKSQVIAKNKF+IGKCED VWVTKDELM+YFPEQAEF NKMIIS
Sbjct: 181 KRFFFKSQVIAKNKFNIGKCEDHVWVTKDELMEYFPEQAEFLNKMIIS 228


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