BLASTX nr result

ID: Glycyrrhiza23_contig00004643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004643
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]             679   0.0  
ref|NP_001242287.1| uncharacterized protein LOC100786789 [Glycin...   666   0.0  
ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|g...   664   0.0  
ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|...   590   e-166
ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|2235...   574   e-161

>ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]
          Length = 491

 Score =  679 bits (1751), Expect = 0.0
 Identities = 354/387 (91%), Positives = 362/387 (93%)
 Frame = +2

Query: 68   NERVAYKLKGYLDLATQEIAKAVRAEEWGLIDDALLHYRNSHRILLEASSTPVPSFITSS 247
            NERVAYKLKGY DLATQEIAK VRAEEWGLIDDALLHYRN+H ILLEA+STPVPS+ITSS
Sbjct: 53   NERVAYKLKGYFDLATQEIAKGVRAEEWGLIDDALLHYRNAHSILLEANSTPVPSYITSS 112

Query: 248  EQQKVQSHRQKISKWQGQVSERLQTLNRRAGSSSANQSTSNLAQTAAVPKKPSNATKNVL 427
            EQQKVQS+R+KISKWQ QVSERLQTL RRAGSSSANQSTS LAQT AVP KPS+  KNVL
Sbjct: 113  EQQKVQSYREKISKWQSQVSERLQTLARRAGSSSANQSTSKLAQTVAVPIKPSSTRKNVL 172

Query: 428  QKYPQRKGQVNKVESPKSSQASGGNYDTKLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL 607
            QK PQR GQVNKV SPKSSQ SG NYD KLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL
Sbjct: 173  QKPPQRTGQVNKVGSPKSSQGSGVNYDDKLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL 232

Query: 608  MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSK 787
            MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES+ATFFNV+AASLTSK
Sbjct: 233  MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTSK 292

Query: 788  WVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS 967
            WVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS
Sbjct: 293  WVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS 352

Query: 968  NPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRXXXXXXXXXGQAFSLPSRDL 1147
            NPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVR         GQAFSLPSRDL
Sbjct: 353  NPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRKLLLKHKLKGQAFSLPSRDL 412

Query: 1148 ERLVKETEGYSGSDLQALCEEAAMMPI 1228
            ERLVKETEGYSGSDLQALCEEAAMMPI
Sbjct: 413  ERLVKETEGYSGSDLQALCEEAAMMPI 439


>ref|NP_001242287.1| uncharacterized protein LOC100786789 [Glycine max]
            gi|255636469|gb|ACU18573.1| unknown [Glycine max]
          Length = 486

 Score =  666 bits (1719), Expect = 0.0
 Identities = 348/387 (89%), Positives = 358/387 (92%)
 Frame = +2

Query: 68   NERVAYKLKGYLDLATQEIAKAVRAEEWGLIDDALLHYRNSHRILLEASSTPVPSFITSS 247
            NERVAYKLKGY DLATQEIAK VRAEEWGLIDDALLHYRN+H ILLEA+STPVPS+IT+S
Sbjct: 48   NERVAYKLKGYFDLATQEIAKGVRAEEWGLIDDALLHYRNAHSILLEANSTPVPSYITTS 107

Query: 248  EQQKVQSHRQKISKWQGQVSERLQTLNRRAGSSSANQSTSNLAQTAAVPKKPSNATKNVL 427
            EQQKVQS+R+KISKWQ QVSERLQTL RRAGSSSANQSTS L QTAA P K  +  KNVL
Sbjct: 108  EQQKVQSYREKISKWQSQVSERLQTLARRAGSSSANQSTSKLGQTAAAPIKTLSTRKNVL 167

Query: 428  QKYPQRKGQVNKVESPKSSQASGGNYDTKLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL 607
            QK PQR GQVNKV SPKSSQASG NYD KLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL
Sbjct: 168  QKPPQRGGQVNKVGSPKSSQASGVNYDNKLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL 227

Query: 608  MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSK 787
            MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES+ATFFNV+AASLTSK
Sbjct: 228  MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTSK 287

Query: 788  WVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS 967
            WVGE EKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS
Sbjct: 288  WVGEAEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS 347

Query: 968  NPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRXXXXXXXXXGQAFSLPSRDL 1147
            NPDDIVIVIGATNKPQELDDAVLRRLVKRIY+PLPDENVR         GQAFSLPSRDL
Sbjct: 348  NPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRKLLLKHKLKGQAFSLPSRDL 407

Query: 1148 ERLVKETEGYSGSDLQALCEEAAMMPI 1228
            ERLVKETE YSGSDLQALCEEAAMMPI
Sbjct: 408  ERLVKETERYSGSDLQALCEEAAMMPI 434


>ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|gb|AES79990.1| Spastin
            [Medicago truncatula]
          Length = 486

 Score =  664 bits (1712), Expect = 0.0
 Identities = 343/387 (88%), Positives = 358/387 (92%)
 Frame = +2

Query: 68   NERVAYKLKGYLDLATQEIAKAVRAEEWGLIDDALLHYRNSHRILLEASSTPVPSFITSS 247
            NERVAYKLKGY DLATQEI KAVRAEEWGLIDDA+LHYRN+HRILLEA+STPVPSFIT S
Sbjct: 48   NERVAYKLKGYYDLATQEIDKAVRAEEWGLIDDAILHYRNAHRILLEANSTPVPSFITPS 107

Query: 248  EQQKVQSHRQKISKWQGQVSERLQTLNRRAGSSSANQSTSNLAQTAAVPKKPSNATKNVL 427
            E+QKVQS+RQKISKWQGQVSERLQ L+RRAGSS ANQSTSN AQTAAVP K SN TK VL
Sbjct: 108  EKQKVQSYRQKISKWQGQVSERLQALSRRAGSSFANQSTSNRAQTAAVPTKLSNTTKKVL 167

Query: 428  QKYPQRKGQVNKVESPKSSQASGGNYDTKLVEMINTAIVDRSPSVRWEDVAGLEKAKQAL 607
            QK PQRK +VNKV+SPK SQ SG NYDTKLVEMINTAIVDRSPSVRW+DV GLEKAKQAL
Sbjct: 168  QKNPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGLEKAKQAL 227

Query: 608  MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSK 787
            MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNV+AASLTSK
Sbjct: 228  MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSK 287

Query: 788  WVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTS 967
            WVGE EKLVRTLFMVA+SRQPSVIFIDEIDSIMSTR  NEN+ASRRLKSEFLIQFDGVTS
Sbjct: 288  WVGEAEKLVRTLFMVAVSRQPSVIFIDEIDSIMSTRTTNENEASRRLKSEFLIQFDGVTS 347

Query: 968  NPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRXXXXXXXXXGQAFSLPSRDL 1147
            NPDDIVIVIGATNKPQELDDAVLRRLVKRIY+PLP+ENVR         GQAFSLPSRDL
Sbjct: 348  NPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDL 407

Query: 1148 ERLVKETEGYSGSDLQALCEEAAMMPI 1228
            E LV+ETEGYSGSDLQALCEEAAMMPI
Sbjct: 408  EMLVRETEGYSGSDLQALCEEAAMMPI 434


>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|296089089|emb|CBI38792.3|
            unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  590 bits (1521), Expect = e-166
 Identities = 305/394 (77%), Positives = 339/394 (86%), Gaps = 7/394 (1%)
 Frame = +2

Query: 68   NERVAYKLKGYLDLATQEIAKAVRAEEWGLIDDALLHYRNSHRILLEASSTPVPSFITSS 247
            N+R+AYKLKGY DLAT+EIAKAVRAEEWGL+DDA++HY+N+ RIL+EASST  PSFI+SS
Sbjct: 46   NQRIAYKLKGYYDLATEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEASSTSTPSFISSS 105

Query: 248  EQQKVQSHRQKISKWQGQVSERLQTLNRRAGSSSANQSTSNLAQTAAVPKKPSNATKNVL 427
            EQ+KV+S+RQKISKWQGQV+ERL+ L RRAG +S N++T    + A      SNA  +VL
Sbjct: 106  EQEKVKSYRQKISKWQGQVAERLEILIRRAGGTSTNKNTLADTKPATTSSTKSNARTDVL 165

Query: 428  QKYPQR-------KGQVNKVESPKSSQASGGNYDTKLVEMINTAIVDRSPSVRWEDVAGL 586
            QK P         + Q +KV S K  Q SG  YD KLVEMINT IVDRSPSV+W+DVAGL
Sbjct: 166  QKSPLTNRRSPIMRSQSDKVVSSKPVQESGHGYDAKLVEMINTVIVDRSPSVKWDDVAGL 225

Query: 587  EKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVS 766
            EKAKQAL+EMVILPTKR+DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES ATFFNVS
Sbjct: 226  EKAKQALLEMVILPTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESAATFFNVS 285

Query: 767  AASLTSKWVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLI 946
            A+SLTSKWVGEGEKLVRTLFMVAISRQPSVIF+DEIDSIMSTR+ NEN+ASRRLKSEFL+
Sbjct: 286  ASSLTSKWVGEGEKLVRTLFMVAISRQPSVIFMDEIDSIMSTRMTNENEASRRLKSEFLV 345

Query: 947  QFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRXXXXXXXXXGQAF 1126
            QFDGVTSNPDD+VIVIGATNKPQELDDAVLRRLVKRIY+PLPDENVR         GQAF
Sbjct: 346  QFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAF 405

Query: 1127 SLPSRDLERLVKETEGYSGSDLQALCEEAAMMPI 1228
            SLP  DLERLV+ETEGYSGSDLQALCEEAAMMPI
Sbjct: 406  SLPGGDLERLVQETEGYSGSDLQALCEEAAMMPI 439


>ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|223548923|gb|EEF50412.1|
            Spastin, putative [Ricinus communis]
          Length = 518

 Score =  574 bits (1480), Expect = e-161
 Identities = 302/424 (71%), Positives = 337/424 (79%), Gaps = 37/424 (8%)
 Frame = +2

Query: 68   NERVAYKLKGYLDLATQEIAKAVRAEEWGLIDDALLHYRNSHRILLEASSTPVPSFITSS 247
            NERVAYKLKGY DLA +EI KAVRAEEWGL DDA++HY+N+ RI +E +ST VPS+I+ S
Sbjct: 42   NERVAYKLKGYFDLAKEEIDKAVRAEEWGLPDDAIVHYKNAQRIFIEGNSTSVPSYISFS 101

Query: 248  EQQKVQSHRQKISKWQGQVSERLQTLNRRAGSSSANQSTSNLAQTAAVPKKPSNATKNVL 427
            EQ+KV+S+RQKISKWQG +SERLQ LNRRA  +S+N++T   A TAAV    SN  +++ 
Sbjct: 102  EQEKVKSYRQKISKWQGHISERLQALNRRAAGTSSNKNTLTHAHTAAVSSSKSNFRQDLS 161

Query: 428  QKYP-------------------------------------QRKGQVNKVESPKSSQASG 496
            QK P                                       + Q +    PKS+Q SG
Sbjct: 162  QKSPCSTRNTPVVRNQPNKAAKSKIAQNMPQNSPRSTGNTAVTRNQPDTAAKPKSAQESG 221

Query: 497  GNYDTKLVEMINTAIVDRSPSVRWEDVAGLEKAKQALMEMVILPTKRRDLFTGLRRPARG 676
              Y+ KLVEMINTAIVDRSPSV+W+DVAGLEKAKQ+LMEMVILPTKRRDLFTGLRRPARG
Sbjct: 222  NGYEAKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLMEMVILPTKRRDLFTGLRRPARG 281

Query: 677  LLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGEGEKLVRTLFMVAISRQPSV 856
            LLLFGPPGNGKTMLAKAVASESEATFFNVSA+SLTSKWVGEGEKLVRTLFMVAISRQPSV
Sbjct: 282  LLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEGEKLVRTLFMVAISRQPSV 341

Query: 857  IFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVL 1036
            IF+DEIDSIMSTRL NENDASRRLKSEFLIQFDGVTSNP+D+VIVIGATNKPQELDDAVL
Sbjct: 342  IFLDEIDSIMSTRLTNENDASRRLKSEFLIQFDGVTSNPNDLVIVIGATNKPQELDDAVL 401

Query: 1037 RRLVKRIYIPLPDENVRXXXXXXXXXGQAFSLPSRDLERLVKETEGYSGSDLQALCEEAA 1216
            RRLVKRIY+PLPD+N+R         GQAFSL   DLERLV+ETEGYSGSDLQALCEEAA
Sbjct: 402  RRLVKRIYVPLPDKNIRLLLFKHKLKGQAFSLSDGDLERLVRETEGYSGSDLQALCEEAA 461

Query: 1217 MMPI 1228
            MMPI
Sbjct: 462  MMPI 465


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