BLASTX nr result

ID: Glycyrrhiza23_contig00004627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004627
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237520.1| MYB transcription factor MYB93 [Glycine max]...    77   2e-12
gb|AFK45128.1| unknown [Medicago truncatula]                           65   5e-09
ref|XP_003608683.1| MYB domain containing transcription factor [...    65   5e-09
ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07
ref|XP_004170300.1| PREDICTED: transcription factor MYB1R1-like ...    58   8e-07

>ref|NP_001237520.1| MYB transcription factor MYB93 [Glycine max]
           gi|110931692|gb|ABH02845.1| MYB transcription factor
           MYB93 [Glycine max]
          Length = 333

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -3

Query: 545 LSLGDSMGDSGPSSLSRKLLEEGPSRQSAFHATPPCDSSNVSGSAIHA 402
           LSLG+S+GDSGPS+LSRKL+EEGPSRQSAFHATP C   N  GSAIHA
Sbjct: 287 LSLGESIGDSGPSTLSRKLIEEGPSRQSAFHATPTCGDMN--GSAIHA 332


>gb|AFK45128.1| unknown [Medicago truncatula]
          Length = 124

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = -3

Query: 545 LSLGDSMGDSGPSSLSRKLLEEGPSRQSAFHATPPC 438
           LSLG+++GD+GPS+LSRKLLEEGPSRQSAFH TP C
Sbjct: 85  LSLGETIGDAGPSTLSRKLLEEGPSRQSAFHTTPAC 120


>ref|XP_003608683.1| MYB domain containing transcription factor [Medicago truncatula]
           gi|149727895|gb|ABR28336.1| MYB transcription factor
           MYB48 [Medicago truncatula] gi|355509738|gb|AES90880.1|
           MYB domain containing transcription factor [Medicago
           truncatula]
          Length = 326

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = -3

Query: 545 LSLGDSMGDSGPSSLSRKLLEEGPSRQSAFHATPPC 438
           LSLG+++GD+GPS+LSRKLLEEGPSRQSAFH TP C
Sbjct: 287 LSLGETIGDAGPSTLSRKLLEEGPSRQSAFHTTPAC 322


>ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|222833981|gb|EEE72458.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
 Frame = -3

Query: 545 LSLGDSMGDSGPSSLSRKLLEEGPSRQSAFHATPPCDSS--NVSGSAIHA 402
           LS+G+S+GD G SSLS KLLE GPSRQSAFHA P  +SS  N S S IHA
Sbjct: 288 LSIGESIGDDGSSSLSLKLLE-GPSRQSAFHANPASNSSGINRSSSPIHA 336


>ref|XP_004170300.1| PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]
          Length = 335

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
 Frame = -3

Query: 545 LSLGDSMGDSGPSSLSRKLLEEGPSRQSAFHATPPCDSSNVS--GSAIHA 402
           LSLG+S+G SGPSSLS KLL EG SR+SAFHA P   S N+S  GS IHA
Sbjct: 286 LSLGESIGHSGPSSLSLKLL-EGSSRRSAFHANPASGSENMSSGGSPIHA 334


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