BLASTX nr result

ID: Glycyrrhiza23_contig00004544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004544
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot ...   334   2e-89
ref|YP_002836121.1| cytochrome b6/f complex subunit IV [Megalera...   332   1e-88
ref|YP_007375074.1| cytochrome b6/f complex subunit IV [Quercus ...   331   2e-88
gb|ADD31074.1| cytochrome b6/f complex subunit IV protein [Troch...   330   3e-88
ref|YP_740681.1| cytochrome b6/f complex subunit IV [Nandina dom...   330   3e-88

>ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot esculenta]
           gi|225544154|ref|YP_002720143.1| petD [Jatropha curcas]
           gi|326909423|ref|YP_004327693.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
           gi|157695916|gb|ABV66185.1| cytochrome b6/f complex
           subunit IV [Manihot esculenta]
           gi|224979595|gb|ACN72722.1| petD [Jatropha curcas]
           gi|290489368|gb|ADD31068.1| cytochrome b6/f complex
           subunit IV protein [Heuchera sanguinea]
           gi|290489370|gb|ADD31069.1| cytochrome b6/f complex
           subunit IV protein [Liquidambar styraciflua]
           gi|308523537|gb|ADO33587.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
          Length = 167

 Score =  334 bits (857), Expect = 2e-89
 Identities = 165/167 (98%), Positives = 166/167 (99%)
 Frame = -1

Query: 970 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 791
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 790 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 611
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 610 QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 470
           QNPFRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF IDSIVK
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSIVK 167


>ref|YP_002836121.1| cytochrome b6/f complex subunit IV [Megaleranthis saniculifolia]
           gi|226933913|gb|ACO92046.1| cytochrome b6/f complex
           subunit IV [Megaleranthis saniculifolia]
          Length = 167

 Score =  332 bits (851), Expect = 1e-88
 Identities = 164/167 (98%), Positives = 165/167 (98%)
 Frame = -1

Query: 970 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 791
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 790 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 611
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 610 QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 470
           QNPFRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF ID IVK
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDFIVK 167


>ref|YP_007375074.1| cytochrome b6/f complex subunit IV [Quercus rubra]
           gi|441421953|gb|AGC31277.1| cytochrome b6/f complex
           subunit IV [Quercus rubra]
          Length = 167

 Score =  331 bits (849), Expect = 2e-88
 Identities = 163/167 (97%), Positives = 165/167 (98%)
 Frame = -1

Query: 970 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 791
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 790 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 611
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMV VPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVLVPAGLLTVPFLENVNKF 120

Query: 610 QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 470
           QNPFRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLG+F IDSIVK
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGIFQIDSIVK 167


>gb|ADD31074.1| cytochrome b6/f complex subunit IV protein [Trochodendron
           aralioides]
          Length = 167

 Score =  330 bits (847), Expect = 3e-88
 Identities = 163/167 (97%), Positives = 164/167 (98%)
 Frame = -1

Query: 970 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 791
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 790 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 611
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 610 QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 470
           QNPFRRPVATTVFLIGT VALWLGIGATLPI+KSLTLGLF IDS VK
Sbjct: 121 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSSVK 167


>ref|YP_740681.1| cytochrome b6/f complex subunit IV [Nandina domestica]
           gi|114054502|gb|ABI49895.1| cytochrome b6/f complex
           subunit IV [Nandina domestica]
          Length = 167

 Score =  330 bits (847), Expect = 3e-88
 Identities = 163/167 (97%), Positives = 165/167 (98%)
 Frame = -1

Query: 970 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 791
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIAC+VGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACSVGLAVLEPS 60

Query: 790 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 611
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 610 QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 470
           QNPFRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF IDS VK
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSTVK 167


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