BLASTX nr result

ID: Glycyrrhiza23_contig00004484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004484
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   731   0.0  
ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...   730   0.0  
ref|XP_003625879.1| Peptide chain release factor [Medicago trunc...   689   0.0  
ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   659   0.0  
ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|2...   654   0.0  

>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  731 bits (1888), Expect = 0.0
 Identities = 369/424 (87%), Positives = 399/424 (94%), Gaps = 1/424 (0%)
 Frame = +1

Query: 112  TVSMSSLTASFTARICGARRDIV-PLRHRSLHQFTNGRVTVAPGGSTTLTPTRIVCMAEP 288
            +V+M+SLTASFTARIC  RRD++ P+RHRSLH FT  RV      +T LTP RIVCMAEP
Sbjct: 12   SVAMNSLTASFTARICATRRDLLLPIRHRSLHPFTTRRV------ATKLTPPRIVCMAEP 65

Query: 289  YLITKLESAEKTWNELSVKLADPDIVSNPSEYQKVAQSVAELNEVVSTYKRFKDCEKLLE 468
            YLITKLESAEKTW ELSVKLADPD+VS+P EYQK+AQSV+EL+EVVSTY+RFKDCEK+LE
Sbjct: 66   YLITKLESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVSELDEVVSTYRRFKDCEKVLE 125

Query: 469  ETKALTKDDGNDADMAEMISYEIDSLSKQLSELEDKLKVLLLPSDPLDARNILLEVRAGT 648
            ETKAL KDDGND DM EMIS+EID+LSKQL+ELE+K+KVLLLPSDP+DARNILLEVRAGT
Sbjct: 126  ETKALAKDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLLLPSDPMDARNILLEVRAGT 185

Query: 649  GGDEAGIWAGDLVRMYEKYSERNSWKFSRVSCSEAEKGGYKTYVMEIKGKRVYSKLKYES 828
            GGDEAGIWAGDLVRMYE+YSERNSWK+S VS S AEKGGYKTYVMEIKG RVYSKLKYES
Sbjct: 186  GGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYES 245

Query: 829  GVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 1008
            GVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV
Sbjct: 246  GVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 305

Query: 1009 ETAIDLVHKPTGIRIFCTEERTQIQNKNRAFQLLRAKLYDIKVREQQESIRNQRKLQVGT 1188
            ETAIDL HKPTGIRIFCTEERTQ++N+NRAFQLLRAKLY+IKVREQQES+RNQRKLQVGT
Sbjct: 306  ETAIDLFHKPTGIRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGT 365

Query: 1189 GARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIEDAVQSCVTTEQKELLEELAESVG 1368
            GAR+EKIRTYNYKDNRVTDHRLK+N+ELTSFLDGDIEDAVQSCVT EQKELLEELAESVG
Sbjct: 366  GARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVG 425

Query: 1369 APAG 1380
            APAG
Sbjct: 426  APAG 429


>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score =  730 bits (1884), Expect = 0.0
 Identities = 366/423 (86%), Positives = 396/423 (93%)
 Frame = +1

Query: 112  TVSMSSLTASFTARICGARRDIVPLRHRSLHQFTNGRVTVAPGGSTTLTPTRIVCMAEPY 291
            +V+M+SLTASFTARIC  RRD++ +RHRS H  T  RV      +T LTP RIVCMAEPY
Sbjct: 12   SVAMNSLTASFTARICATRRDLLHIRHRSFHPLTTRRV------ATKLTPPRIVCMAEPY 65

Query: 292  LITKLESAEKTWNELSVKLADPDIVSNPSEYQKVAQSVAELNEVVSTYKRFKDCEKLLEE 471
            LITKLESAEKTW ELSVKLADPD+VS+P EYQK+AQSVAEL+EVVSTY+RFKDCEK+LEE
Sbjct: 66   LITKLESAEKTWQELSVKLADPDVVSDPKEYQKLAQSVAELDEVVSTYRRFKDCEKVLEE 125

Query: 472  TKALTKDDGNDADMAEMISYEIDSLSKQLSELEDKLKVLLLPSDPLDARNILLEVRAGTG 651
            TKAL KDDGND DM EMIS+EIDSLSKQL+ELE+KLKVLLLPSDP+DA+NILLEVRAGTG
Sbjct: 126  TKALAKDDGNDEDMVEMISFEIDSLSKQLAELEEKLKVLLLPSDPMDAKNILLEVRAGTG 185

Query: 652  GDEAGIWAGDLVRMYEKYSERNSWKFSRVSCSEAEKGGYKTYVMEIKGKRVYSKLKYESG 831
            GDEAGIWAGDLVRMYE+YSERNSWK+S VS S AEKGGYKTYVMEIKG RVYSKLKYESG
Sbjct: 186  GDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESG 245

Query: 832  VHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 1011
            VHRVQRVPLTETQGRVHTSTATVAIMPEADEVEV+IDPKDIELTTARSGGAGGQNVNKVE
Sbjct: 246  VHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVIIDPKDIELTTARSGGAGGQNVNKVE 305

Query: 1012 TAIDLVHKPTGIRIFCTEERTQIQNKNRAFQLLRAKLYDIKVREQQESIRNQRKLQVGTG 1191
            TAIDL HKPTGIRIFCTEERTQ++NKNRAFQLLRAKLY++K+REQQES+RNQRKLQVGTG
Sbjct: 306  TAIDLFHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEMKIREQQESLRNQRKLQVGTG 365

Query: 1192 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIEDAVQSCVTTEQKELLEELAESVGA 1371
            AR+EKIRTYNYKDNRVTDHRLK+N+ELTSFLDGDIEDAVQSCVT EQKELLEELAESVGA
Sbjct: 366  ARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGA 425

Query: 1372 PAG 1380
            PAG
Sbjct: 426  PAG 428


>ref|XP_003625879.1| Peptide chain release factor [Medicago truncatula]
            gi|355500894|gb|AES82097.1| Peptide chain release factor
            [Medicago truncatula]
          Length = 421

 Score =  689 bits (1779), Expect = 0.0
 Identities = 354/424 (83%), Positives = 382/424 (90%), Gaps = 5/424 (1%)
 Frame = +1

Query: 121  MSSLTASFTARICGARRDIVPLRHRSLHQFTNGRVTVAPGGSTTLTPTRIVCMAEPYLIT 300
            M+SLTASFTARI G R D+V LR+RS+HQF N RVT+ P    TLT TR VCMAEPYL+ 
Sbjct: 1    MNSLTASFTARIYGTRCDVVLLRNRSVHQFNNRRVTLLP----TLTSTRFVCMAEPYLLL 56

Query: 301  KLESAEKTWNELSVKLADPDIVSNPSEYQKVAQSVAELNEVVSTYKRFKDCEKLLEETKA 480
            KLESAEKTW +LSVKLADPDIVSNPSEYQK+AQSV+EL+ VVS Y++FKDCEK LEET+A
Sbjct: 57   KLESAEKTWKDLSVKLADPDIVSNPSEYQKLAQSVSELDVVVSLYQKFKDCEKTLEETQA 116

Query: 481  LTKDDGNDADMAEMISYEIDSLSKQLSELEDKLKVLLLPSDPLDARNILLEVRAGTGGDE 660
            L KD GND DM EMISYEI+SLSKQLSELE+KLKVLLLPSDPLD RNI+LEVRAGTGGDE
Sbjct: 117  LAKDAGNDQDMTEMISYEIESLSKQLSELEEKLKVLLLPSDPLDERNIMLEVRAGTGGDE 176

Query: 661  AGIWAGDLVRMYEKYSERNSWKFSRVSCSEAEKGGYKTYVMEIKGKRVYSKLKYESGVHR 840
            AGIWAGDLVRMYEK+SE NSWK S +SCSEAEKGGYKTYVMEIKG RVYSKLK+ESGVHR
Sbjct: 177  AGIWAGDLVRMYEKFSELNSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKFESGVHR 236

Query: 841  VQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 1020
            VQRVPLTETQGRVHTSTATVAIMPE DEVEVVIDPKDIE+TTARSGGAGGQNVNKVETAI
Sbjct: 237  VQRVPLTETQGRVHTSTATVAIMPEVDEVEVVIDPKDIEVTTARSGGAGGQNVNKVETAI 296

Query: 1021 DLVHKPTGIRIFCTEERTQIQNKNRAFQLLRAKLYDIKVREQQESIRNQRKLQVGTGARA 1200
            DLVHKPTGIRIFCTE+RTQIQNKN AF+LLRAKLY+IKVREQQESIRNQRK QVGTGAR+
Sbjct: 297  DLVHKPTGIRIFCTEQRTQIQNKNLAFKLLRAKLYEIKVREQQESIRNQRKSQVGTGARS 356

Query: 1201 EKIRTYNYK-----DNRVTDHRLKMNFELTSFLDGDIEDAVQSCVTTEQKELLEELAESV 1365
            EKIRTYNYK     DNRVTDHRLK NF LTSFL G+IE+AVQSCV  EQKEL+EEL ES+
Sbjct: 357  EKIRTYNYKVLNVADNRVTDHRLKQNFSLTSFLGGNIEEAVQSCVAMEQKELMEELVESM 416

Query: 1366 GAPA 1377
            GA A
Sbjct: 417  GATA 420


>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|296086617|emb|CBI32252.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  659 bits (1700), Expect = 0.0
 Identities = 340/420 (80%), Positives = 364/420 (86%)
 Frame = +1

Query: 121  MSSLTASFTARICGARRDIVPLRHRSLHQFTNGRVTVAPGGSTTLTPTRIVCMAEPYLIT 300
            M+SLT SF AR       +   R RS   F   R    P         RIVCMAEPYLIT
Sbjct: 1    MNSLTTSFAARFPARAEQVFCNRVRSFALFRPSRTHRTP---------RIVCMAEPYLIT 51

Query: 301  KLESAEKTWNELSVKLADPDIVSNPSEYQKVAQSVAELNEVVSTYKRFKDCEKLLEETKA 480
            KLESAEKTW ELSVKLADPDIVSNPSEYQK+AQS+AEL+EVVST+KRFKDCEK LEE KA
Sbjct: 52   KLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKA 111

Query: 481  LTKDDGNDADMAEMISYEIDSLSKQLSELEDKLKVLLLPSDPLDARNILLEVRAGTGGDE 660
            L K+DG DADMAEMI+YEI +L+ QL ELE+ +KVLLLPSDPLD+RNILLEVRAGTGGDE
Sbjct: 112  LAKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDE 171

Query: 661  AGIWAGDLVRMYEKYSERNSWKFSRVSCSEAEKGGYKTYVMEIKGKRVYSKLKYESGVHR 840
            AGIWAGDLVRMY+KYSERNSWK++ VS SEAEKGG+KTYV+E+KG  VYSKLKYESGVHR
Sbjct: 172  AGIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHR 231

Query: 841  VQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 1020
            VQRVP TETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA+
Sbjct: 232  VQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 291

Query: 1021 DLVHKPTGIRIFCTEERTQIQNKNRAFQLLRAKLYDIKVREQQESIRNQRKLQVGTGARA 1200
            DL HKPTGIRIFCTEERTQ+QN++RA QLLRAKLY+IKVREQQE IRNQRK QVGTGARA
Sbjct: 292  DLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQELIRNQRKSQVGTGARA 351

Query: 1201 EKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIEDAVQSCVTTEQKELLEELAESVGAPAG 1380
            EKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIE AVQSCV  EQKELLEELA SV  PAG
Sbjct: 352  EKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCVAMEQKELLEELAHSVATPAG 411


>ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score =  654 bits (1686), Expect = 0.0
 Identities = 335/419 (79%), Positives = 369/419 (88%)
 Frame = +1

Query: 124  SSLTASFTARICGARRDIVPLRHRSLHQFTNGRVTVAPGGSTTLTPTRIVCMAEPYLITK 303
            S  T S TAR+       +P  H    Q  +    + P  S + TP RIVCMAEPYLITK
Sbjct: 4    SLATTSLTARMSPT----IPHPHH-FRQTPSRIFFLRPTLSRSTTP-RIVCMAEPYLITK 57

Query: 304  LESAEKTWNELSVKLADPDIVSNPSEYQKVAQSVAELNEVVSTYKRFKDCEKLLEETKAL 483
            LESAEKTW ELSVKL DPD+VSNPSEYQK+AQSVAEL+EVVS +KRFKDCEK+LE+T+AL
Sbjct: 58   LESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRAL 117

Query: 484  TKDDGNDADMAEMISYEIDSLSKQLSELEDKLKVLLLPSDPLDARNILLEVRAGTGGDEA 663
             K+DGND DMAEMI+YEI+SLS +L +LE+KL VLLLPSDPLDARNILLEVRAGTGGDEA
Sbjct: 118  AKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEA 177

Query: 664  GIWAGDLVRMYEKYSERNSWKFSRVSCSEAEKGGYKTYVMEIKGKRVYSKLKYESGVHRV 843
            G+WAGDLVRMY++YSE+NSWK S +S SEAEKGGYKTYVME+KGK VYSKLKYESGVHRV
Sbjct: 178  GLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRV 237

Query: 844  QRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 1023
            QRVP TE QGRVHTSTATVAIMPE DEVEVVIDPK+ ELTTARSGGAGGQNVNKVETA+D
Sbjct: 238  QRVPQTEAQGRVHTSTATVAIMPEVDEVEVVIDPKEYELTTARSGGAGGQNVNKVETAVD 297

Query: 1024 LVHKPTGIRIFCTEERTQIQNKNRAFQLLRAKLYDIKVREQQESIRNQRKLQVGTGARAE 1203
            L+HKPTGIRIFCTEERTQ+QN+NRA QLLRAKLY+IKVREQQESIRNQRK+QVGTGARAE
Sbjct: 298  LIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQESIRNQRKMQVGTGARAE 357

Query: 1204 KIRTYNYKDNRVTDHRLKMNFELTSFLDGDIEDAVQSCVTTEQKELLEELAESVGAPAG 1380
            KIRTYNYKDNRVTDHRLK+NFELTSFL GDIE+AVQ+C   EQKELLEELAESVGAPAG
Sbjct: 358  KIRTYNYKDNRVTDHRLKVNFELTSFLAGDIENAVQACSALEQKELLEELAESVGAPAG 416


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