BLASTX nr result

ID: Glycyrrhiza23_contig00004483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004483
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glyc...   218   1e-54
ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like ...   218   1e-54
ref|XP_003556111.1| PREDICTED: 60S ribosomal protein L36-3-like ...   216   5e-54
gb|AFK38454.1| unknown [Lotus japonicus]                              214   2e-53
ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isofo...   212   6e-53

>ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glycine max]
          Length = 110

 Score =  218 bits (555), Expect = 1e-54
 Identities = 109/110 (99%), Positives = 109/110 (99%)
 Frame = -3

Query: 700 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 521
           MAPK PSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKHPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 520 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 371
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110


>ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
          Length = 110

 Score =  218 bits (554), Expect = 1e-54
 Identities = 109/110 (99%), Positives = 109/110 (99%)
 Frame = -3

Query: 700 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 521
           MAPK PSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 520 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 371
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110


>ref|XP_003556111.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
           gi|356575978|ref|XP_003556112.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform 1 [Glycine max]
           gi|356575980|ref|XP_003556113.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform 2 [Glycine max]
           gi|255645551|gb|ACU23270.1| unknown [Glycine max]
          Length = 110

 Score =  216 bits (549), Expect = 5e-54
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = -3

Query: 700 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 521
           MAPK PSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 520 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 371
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMRAGGAGDKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGAGDKKK 110


>gb|AFK38454.1| unknown [Lotus japonicus]
          Length = 110

 Score =  214 bits (544), Expect = 2e-53
 Identities = 107/110 (97%), Positives = 109/110 (99%)
 Frame = -3

Query: 700 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 521
           MAPKQPSTGLFVGLNKGHVVTKKEL PRPSDRKGKTSKRVHFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRI 60

Query: 520 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 371
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMRAGGAGDKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGAGDKKK 110


>ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera]
           gi|225464489|ref|XP_002268754.1| PREDICTED: 60S
           ribosomal protein L36-3 isoform 1 [Vitis vinifera]
           gi|302143845|emb|CBI22706.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  212 bits (540), Expect = 6e-53
 Identities = 104/110 (94%), Positives = 109/110 (99%)
 Frame = -3

Query: 700 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 521
           MAPKQP+TGLFVGLNKGH+VTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 520 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 371
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR+GG G+KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110


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