BLASTX nr result

ID: Glycyrrhiza23_contig00004456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004456
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40441.1| unknown [Lotus japonicus]                              412   e-113
ref|XP_003523350.1| PREDICTED: thylakoid lumenal 17.4 kDa protei...   408   e-112
ref|NP_001241901.1| uncharacterized protein LOC100785667 [Glycin...   399   e-109
gb|ACJ84164.1| unknown [Medicago truncatula]                          382   e-104
ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protei...   329   5e-88

>gb|AFK40441.1| unknown [Lotus japonicus]
          Length = 239

 Score =  412 bits (1060), Expect = e-113
 Identities = 211/237 (89%), Positives = 216/237 (91%)
 Frame = +1

Query: 52  NVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCSGGDELDGSESKAGLLNFNRVKGVA 231
           NVSIPLPRNGLSI N STKR    TTS STLRI+CSG  ELDGSE K  LLNFN +K VA
Sbjct: 4   NVSIPLPRNGLSIHNHSTKRSC-LTTSPSTLRISCSGVGELDGSECKGRLLNFNGIKSVA 62

Query: 232 CGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDF 411
           CGILAAC V S+AFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDF
Sbjct: 63  CGILAACAVTSAAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDF 122

Query: 412 TNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 591
           TNEKSNLKGK+LSAALMSDAKFDGADM+EVVMSKAYAVG SFKGVDFSNAVLDRVNF KA
Sbjct: 123 TNEKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVNFEKA 182

Query: 592 DLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTIGDDWRVELGCR 762
           DLQGAVFKNTVLSGSTFDDAKLE AVFEDTIIGYIDLQKLC NKTI DDWRVELGCR
Sbjct: 183 DLQGAVFKNTVLSGSTFDDAKLEGAVFEDTIIGYIDLQKLCRNKTIADDWRVELGCR 239


>ref|XP_003523350.1| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 240

 Score =  408 bits (1049), Expect = e-112
 Identities = 204/240 (85%), Positives = 221/240 (92%), Gaps = 1/240 (0%)
 Frame = +1

Query: 46  MANVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCSGGDELDGS-ESKAGLLNFNRVK 222
           M  VSIP+P+NG SIRNFST +   FT S STLRI+CSG  ELDGS E+K GL NFN +K
Sbjct: 1   MGKVSIPVPQNGFSIRNFSTSKRSCFTPSPSTLRISCSGVAELDGSHENKGGLFNFNGIK 60

Query: 223 GVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRL 402
           GVACGILAACTV S+AFPVTAA QRLPPLST+P+RCERAF+GNTIGQANGVYDKPLDLR 
Sbjct: 61  GVACGILAACTVTSAAFPVTAATQRLPPLSTEPHRCERAFIGNTIGQANGVYDKPLDLRQ 120

Query: 403 CDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 582
           CDFT+EK+NLKGKSLSAALMSDAKFDGADM+EVVMSKAYAVGASFKGVDFSNAVLDRVNF
Sbjct: 121 CDFTDEKTNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180

Query: 583 GKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTIGDDWRVELGCR 762
            KADL+GAVFKNTVLSGSTFDDAKL++AVFEDTIIGYIDLQKLCTNKTIGD+WRVELGCR
Sbjct: 181 EKADLEGAVFKNTVLSGSTFDDAKLDNAVFEDTIIGYIDLQKLCTNKTIGDEWRVELGCR 240


>ref|NP_001241901.1| uncharacterized protein LOC100785667 [Glycine max]
           gi|255647148|gb|ACU24042.1| unknown [Glycine max]
          Length = 239

 Score =  399 bits (1025), Expect = e-109
 Identities = 203/240 (84%), Positives = 216/240 (90%), Gaps = 1/240 (0%)
 Frame = +1

Query: 46  MANVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCSGGDELDGS-ESKAGLLNFNRVK 222
           MANVSIPLPRNG S  N+STKR   FT SASTLRI+CSG  E DGS + K GL NFN +K
Sbjct: 1   MANVSIPLPRNGFSKPNYSTKRPC-FTPSASTLRISCSGVAEFDGSHQKKGGLFNFNGIK 59

Query: 223 GVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRL 402
           GVACGILAAC V S+AFPVTAA QRLPPLST+PNRCERAFVGNTIGQANGVYDKPLDLR 
Sbjct: 60  GVACGILAACAVTSAAFPVTAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRQ 119

Query: 403 CDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 582
           CDFTNEK+NLKGKS SAALMSDAKFDGADM+EVVMSKAYA GASFKGVDFSNAVLDRVNF
Sbjct: 120 CDFTNEKTNLKGKSPSAALMSDAKFDGADMTEVVMSKAYAAGASFKGVDFSNAVLDRVNF 179

Query: 583 GKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTIGDDWRVELGCR 762
            KADL+GA+FKNTVLSGS FDDAKL++AVFEDTIIGYID QKLCTNKTIGD+WRVELGCR
Sbjct: 180 EKADLEGAIFKNTVLSGSPFDDAKLDNAVFEDTIIGYIDFQKLCTNKTIGDEWRVELGCR 239


>gb|ACJ84164.1| unknown [Medicago truncatula]
          Length = 240

 Score =  382 bits (982), Expect = e-104
 Identities = 199/241 (82%), Positives = 212/241 (87%), Gaps = 2/241 (0%)
 Frame = +1

Query: 46  MANVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCS--GGDELDGSESKAGLLNFNRV 219
           MAN+SI LPR  LSIRNFSTKR   FTTSA    ITCS  G  ELDG+E+K  LL+ N++
Sbjct: 1   MANLSIQLPRTSLSIRNFSTKRPC-FTTSALPFTITCSVVGEAELDGTENKPRLLSLNKI 59

Query: 220 KGVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLR 399
           KGVACGILAA  V S++FPVTAA QRLPPLSTDPNRCERAFVGNTIGQANGVYDK LDLR
Sbjct: 60  KGVACGILAAYAVTSASFPVTAATQRLPPLSTDPNRCERAFVGNTIGQANGVYDKALDLR 119

Query: 400 LCDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVN 579
            CDFTNEKSNLKGK+LSAALMSDAKFDGADM+EVVMSKAYAVG SFKGVDFSNAVLDRVN
Sbjct: 120 KCDFTNEKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVN 179

Query: 580 FGKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTIGDDWRVELGC 759
           FGKADLQGAVF+NTVLSGSTFDDAKLE AVFEDTIIGYIDLQK+C N TIGD+ R ELGC
Sbjct: 180 FGKADLQGAVFRNTVLSGSTFDDAKLEGAVFEDTIIGYIDLQKICRNTTIGDEGRAELGC 239

Query: 760 R 762
           R
Sbjct: 240 R 240


>ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis
           vinifera]
          Length = 244

 Score =  329 bits (844), Expect = 5e-88
 Identities = 179/244 (73%), Positives = 198/244 (81%), Gaps = 1/244 (0%)
 Frame = +1

Query: 34  REKTMANVSIPLPRNGLSIRNFSTKRHRRFTTSA-STLRITCSGGDELDGSESKAGLLNF 210
           REK MA +SIPL     S+++ S KRHR       S  RI+CS     D  E KA    F
Sbjct: 10  REK-MATLSIPL-----SLQHSSPKRHRFSVPELHSPFRISCSAS--WDSPELKASSSQF 61

Query: 211 NRVKGVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPL 390
             +K VA GILA C V ++A PV AA+QRLPPLST+PNRCERAFVGNTIGQANGVYDKP+
Sbjct: 62  KELKNVAFGILAVCAV-TAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPI 120

Query: 391 DLRLCDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLD 570
           DLR CD+TNEKSNLKGKSL+AALMS+AKFDGADMSEVVMSKAYAVGASFKGVDF+NAVLD
Sbjct: 121 DLRFCDYTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLD 180

Query: 571 RVNFGKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTIGDDWRVE 750
           RVNFGKA+LQGAVFKNTVLSGSTFD A+LEDAVFEDTIIGYIDLQK+CTN +I  D R E
Sbjct: 181 RVNFGKANLQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAE 240

Query: 751 LGCR 762
           LGCR
Sbjct: 241 LGCR 244


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