BLASTX nr result

ID: Glycyrrhiza23_contig00004441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004441
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE76632.1| leucine rich repeat protein [Cicer arietinum]         576   e-162
ref|XP_003599106.1| DNA-damage-repair/toleration protein DRT100 ...   551   e-154
gb|ACJ85058.1| unknown [Medicago truncatula]                          549   e-154
ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|1...   526   e-147
gb|ABK94260.1| unknown [Populus trichocarpa]                          524   e-146

>emb|CAE76632.1| leucine rich repeat protein [Cicer arietinum]
          Length = 368

 Score =  576 bits (1485), Expect = e-162
 Identities = 285/367 (77%), Positives = 317/367 (86%), Gaps = 2/367 (0%)
 Frame = +2

Query: 62   ASLLISVTVILXXXXXXXXNGCSPSDRAALVAFRKALNEPYHGIFNSWSGDNCCVNWYGV 241
            +S +I VTV L        NGCSPSDRAAL++F+ AL EPYHGIFNSWSG+NCC+NWYG+
Sbjct: 3    SSFIIPVTVFLATVIIAV-NGCSPSDRAALLSFKAALKEPYHGIFNSWSGENCCLNWYGI 61

Query: 242  SCDATTGRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICKLDRLTTLVVADWKAISGV 421
            SCD+T+GRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICK+DRLT+L++ADWKAI+G 
Sbjct: 62   SCDSTSGRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICKIDRLTSLIIADWKAITGD 121

Query: 422  VPPCVTSLPSLRILDLIGNQISGEIPSDVGKLQRLTVLNLADNAISGVIPASIVDLASLK 601
            +PPCVTSL +LRILDLIGNQI+G+IPS +G LQ L+VLNLADN+ISG IPASI DL SLK
Sbjct: 122  IPPCVTSLSNLRILDLIGNQIAGKIPSTIGNLQSLSVLNLADNSISGEIPASIADLGSLK 181

Query: 602  HLDLSNNRLCGEIPANFGKLSMLSRALLSRNQLSGSIPVSISKIYWLADLDLSTNRLTGS 781
            HLDLSNN L G IPANFGKL MLSRALL+RN+L+GSIPVSIS IY LADLDLS NRLTGS
Sbjct: 182  HLDLSNNVLTGSIPANFGKLQMLSRALLNRNKLTGSIPVSISNIYRLADLDLSMNRLTGS 241

Query: 782  VPAELGRMPVXXXXXXXXXXXXGQIPPSLLSNSGIGILNLSRNGFEGTIPDVFGPKTYFM 961
            VP+ELG+M V            GQIP SLLSNSG+GILNLSRNGF GTIPDVFGPK+YFM
Sbjct: 242  VPSELGKMQVLSTLNLDSNLLSGQIPSSLLSNSGLGILNLSRNGFSGTIPDVFGPKSYFM 301

Query: 962  ALDLSYNGLKGRVPGTLSSAKYIGHLDLSHNHLCGSIP--LGSPFDHLEASSFSYNDCLC 1135
            ALD+S+N L GRVPG+L SAKYIGHLDLSHNHLCGSIP  LGSPFDHLEASSFS NDCLC
Sbjct: 302  ALDMSFNNLNGRVPGSLLSAKYIGHLDLSHNHLCGSIPLGLGSPFDHLEASSFSNNDCLC 361

Query: 1136 GNPLKIC 1156
            GNPLK C
Sbjct: 362  GNPLKTC 368


>ref|XP_003599106.1| DNA-damage-repair/toleration protein DRT100 [Medicago truncatula]
            gi|355488154|gb|AES69357.1| DNA-damage-repair/toleration
            protein DRT100 [Medicago truncatula]
          Length = 369

 Score =  551 bits (1421), Expect = e-154
 Identities = 266/367 (72%), Positives = 307/367 (83%), Gaps = 2/367 (0%)
 Frame = +2

Query: 62   ASLLISVTVILXXXXXXXXNGCSPSDRAALVAFRKALNEPYHGIFNSWSGDNCCVNWYGV 241
            +S   SV  +         +GCSPSDR AL++F+ +L EPYHGIFN+WSG+NCCVNWYGV
Sbjct: 3    SSFTFSVVTVFLATVILTVHGCSPSDRTALLSFKASLKEPYHGIFNTWSGENCCVNWYGV 62

Query: 242  SCDATTGRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICKLDRLTTLVVADWKAISGV 421
            SCD+TTGRVTDINLRGESEDPI  KSG+SGYMTGKISPEICK+D LT+ ++ADWKAISG 
Sbjct: 63   SCDSTTGRVTDINLRGESEDPIISKSGKSGYMTGKISPEICKIDSLTSFILADWKAISGE 122

Query: 422  VPPCVTSLPSLRILDLIGNQISGEIPSDVGKLQRLTVLNLADNAISGVIPASIVDLASLK 601
            +P C+TSL +LRILDLIGNQ++G+IP ++GKLQRLTVLNLA+N+ISG IP S+V+L SLK
Sbjct: 123  IPQCLTSLSNLRILDLIGNQLTGKIPVNIGKLQRLTVLNLAENSISGEIPTSVVELCSLK 182

Query: 602  HLDLSNNRLCGEIPANFGKLSMLSRALLSRNQLSGSIPVSISKIYWLADLDLSTNRLTGS 781
            HLDLS+N L G IP NFG L MLSRALL+RNQL+GSIPVS++KIY LADLDLS NRLTGS
Sbjct: 183  HLDLSSNSLTGSIPVNFGNLQMLSRALLNRNQLTGSIPVSVTKIYRLADLDLSMNRLTGS 242

Query: 782  VPAELGRMPVXXXXXXXXXXXXGQIPPSLLSNSGIGILNLSRNGFEGTIPDVFGPKTYFM 961
            +P ELG+MPV            GQIP SLLSNSG+GILNLSRNGF GTIPDVF P +YFM
Sbjct: 243  LPYELGKMPVLSTLNLDSNSLSGQIPSSLLSNSGLGILNLSRNGFSGTIPDVFCPNSYFM 302

Query: 962  ALDLSYNGLKGRVPGTLSSAKYIGHLDLSHNHLCGSIPL--GSPFDHLEASSFSYNDCLC 1135
             LD+S+N L GRVPG+LSSAKYIGHLDLSHNHLCGSIPL  GSPFDHL+A+SFS NDCLC
Sbjct: 303  VLDMSFNNLNGRVPGSLSSAKYIGHLDLSHNHLCGSIPLGVGSPFDHLDATSFSNNDCLC 362

Query: 1136 GNPLKIC 1156
            GNPLK C
Sbjct: 363  GNPLKTC 369


>gb|ACJ85058.1| unknown [Medicago truncatula]
          Length = 369

 Score =  549 bits (1414), Expect = e-154
 Identities = 265/367 (72%), Positives = 306/367 (83%), Gaps = 2/367 (0%)
 Frame = +2

Query: 62   ASLLISVTVILXXXXXXXXNGCSPSDRAALVAFRKALNEPYHGIFNSWSGDNCCVNWYGV 241
            +S   SV  +         +GCSPSDR AL++F+ +L EPYHGIFN+WSG+NCCVNWYGV
Sbjct: 3    SSFTFSVVTVFLATVILTVHGCSPSDRTALLSFKASLKEPYHGIFNTWSGENCCVNWYGV 62

Query: 242  SCDATTGRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICKLDRLTTLVVADWKAISGV 421
            SCD+TTGRVTDINLRGESEDPI  KSG+SGYMTGKISPEICK+D LT+ ++ADWKAISG 
Sbjct: 63   SCDSTTGRVTDINLRGESEDPIISKSGKSGYMTGKISPEICKIDSLTSFILADWKAISGE 122

Query: 422  VPPCVTSLPSLRILDLIGNQISGEIPSDVGKLQRLTVLNLADNAISGVIPASIVDLASLK 601
            +P C+TSL +LRILDLIGNQ++G+IP ++GKLQRLTVLNLA+N+ISG IP S+V+L SLK
Sbjct: 123  IPQCLTSLSNLRILDLIGNQLTGKIPVNIGKLQRLTVLNLAENSISGEIPTSVVELCSLK 182

Query: 602  HLDLSNNRLCGEIPANFGKLSMLSRALLSRNQLSGSIPVSISKIYWLADLDLSTNRLTGS 781
            HLDLS+N L G IP NFG L MLSRALL+RNQL+GSIPVS++KIY LADLDLS NRLTGS
Sbjct: 183  HLDLSSNSLTGSIPVNFGNLQMLSRALLNRNQLTGSIPVSVTKIYRLADLDLSMNRLTGS 242

Query: 782  VPAELGRMPVXXXXXXXXXXXXGQIPPSLLSNSGIGILNLSRNGFEGTIPDVFGPKTYFM 961
            +P  LG+MPV            GQIP SLLSNSG+GILNLSRNGF GTIPDVF P +YFM
Sbjct: 243  LPYGLGKMPVLSTLNLDSNSLSGQIPSSLLSNSGLGILNLSRNGFSGTIPDVFCPNSYFM 302

Query: 962  ALDLSYNGLKGRVPGTLSSAKYIGHLDLSHNHLCGSIPL--GSPFDHLEASSFSYNDCLC 1135
             LD+S+N L GRVPG+LSSAKYIGHLDLSHNHLCGSIPL  GSPFDHL+A+SFS NDCLC
Sbjct: 303  VLDMSFNNLNGRVPGSLSSAKYIGHLDLSHNHLCGSIPLGVGSPFDHLDATSFSNNDCLC 362

Query: 1136 GNPLKIC 1156
            GNPLK C
Sbjct: 363  GNPLKTC 369


>ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|151936646|gb|ABS18952.1|
            DRT100 [Populus deltoides] gi|222849697|gb|EEE87244.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  526 bits (1355), Expect = e-147
 Identities = 249/364 (68%), Positives = 300/364 (82%)
 Frame = +2

Query: 65   SLLISVTVILXXXXXXXXNGCSPSDRAALVAFRKALNEPYHGIFNSWSGDNCCVNWYGVS 244
            S L++   +L        + C+PSD AAL+AF+ +LNEPY GIFN+WSG NCC NWYG+S
Sbjct: 2    SALLTTLALLFTLIYTVTSSCTPSDLAALLAFKSSLNEPYLGIFNTWSGTNCCSNWYGIS 61

Query: 245  CDATTGRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICKLDRLTTLVVADWKAISGVV 424
            CD TTGRV DINLRGESEDPIFEK+GRSGYMTG I+P +CKLDRL+TL++ADWK +SG +
Sbjct: 62   CDPTTGRVADINLRGESEDPIFEKAGRSGYMTGSINPSLCKLDRLSTLILADWKGVSGEI 121

Query: 425  PPCVTSLPSLRILDLIGNQISGEIPSDVGKLQRLTVLNLADNAISGVIPASIVDLASLKH 604
            P CV SL +LRILDLIGNQISG+IP+++G LQRLTVLNLADN ++G IPAS+  LA++KH
Sbjct: 122  PGCVASLSNLRILDLIGNQISGKIPANIGNLQRLTVLNLADNGLTGEIPASLTALANMKH 181

Query: 605  LDLSNNRLCGEIPANFGKLSMLSRALLSRNQLSGSIPVSISKIYWLADLDLSTNRLTGSV 784
            LDLS+N+L G++PA+FG L MLSRALLS+NQLSG+IP SIS +Y LADLDLS N+++GSV
Sbjct: 182  LDLSSNKLTGQLPADFGNLKMLSRALLSKNQLSGAIPNSISGMYRLADLDLSVNKISGSV 241

Query: 785  PAELGRMPVXXXXXXXXXXXXGQIPPSLLSNSGIGILNLSRNGFEGTIPDVFGPKTYFMA 964
            P  LG M V            GQ+P SLLS++G+GILNLSRN  EG IPD FGPK+YFMA
Sbjct: 242  PGWLGSMRVLSTLNLDSNMISGQLPASLLSSTGLGILNLSRNAIEGNIPDAFGPKSYFMA 301

Query: 965  LDLSYNGLKGRVPGTLSSAKYIGHLDLSHNHLCGSIPLGSPFDHLEASSFSYNDCLCGNP 1144
            LDLSYN LKG +PG+LSSA Y+GHLDLSHNHLCG+IP+G+PFDHLEASSFS+NDCLCGNP
Sbjct: 302  LDLSYNNLKGPIPGSLSSAAYVGHLDLSHNHLCGTIPVGTPFDHLEASSFSFNDCLCGNP 361

Query: 1145 LKIC 1156
            LK C
Sbjct: 362  LKTC 365


>gb|ABK94260.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  524 bits (1349), Expect = e-146
 Identities = 248/364 (68%), Positives = 299/364 (82%)
 Frame = +2

Query: 65   SLLISVTVILXXXXXXXXNGCSPSDRAALVAFRKALNEPYHGIFNSWSGDNCCVNWYGVS 244
            S L++   +L        + C+PSD AAL+AF+ +LNEPY GIFN+WSG NCC NWYG+S
Sbjct: 2    SALLTTLALLFTLIYTVTSSCTPSDLAALLAFKSSLNEPYLGIFNTWSGTNCCSNWYGIS 61

Query: 245  CDATTGRVTDINLRGESEDPIFEKSGRSGYMTGKISPEICKLDRLTTLVVADWKAISGVV 424
            CD TTGRV DINLRGESEDPIFEK+GRSGYMTG I+P +CKLDRL+TL++ADWK +SG +
Sbjct: 62   CDPTTGRVADINLRGESEDPIFEKAGRSGYMTGSINPSLCKLDRLSTLILADWKGVSGEI 121

Query: 425  PPCVTSLPSLRILDLIGNQISGEIPSDVGKLQRLTVLNLADNAISGVIPASIVDLASLKH 604
            P CV SL +LRILDLIGNQISG+IP+++G LQRLTVLNLADN ++G IPAS+  LA++KH
Sbjct: 122  PGCVASLSNLRILDLIGNQISGKIPANIGNLQRLTVLNLADNGLTGEIPASLTALANMKH 181

Query: 605  LDLSNNRLCGEIPANFGKLSMLSRALLSRNQLSGSIPVSISKIYWLADLDLSTNRLTGSV 784
            LD S+N+L G++PA+FG L MLSRALLS+NQLSG+IP SIS +Y LADLDLS N+++GSV
Sbjct: 182  LDRSSNKLTGQLPADFGNLKMLSRALLSKNQLSGAIPNSISGMYRLADLDLSVNKISGSV 241

Query: 785  PAELGRMPVXXXXXXXXXXXXGQIPPSLLSNSGIGILNLSRNGFEGTIPDVFGPKTYFMA 964
            P  LG M V            GQ+P SLLS++G+GILNLSRN  EG IPD FGPK+YFMA
Sbjct: 242  PGWLGSMRVLSTLNLDSNMISGQLPASLLSSTGLGILNLSRNAIEGNIPDAFGPKSYFMA 301

Query: 965  LDLSYNGLKGRVPGTLSSAKYIGHLDLSHNHLCGSIPLGSPFDHLEASSFSYNDCLCGNP 1144
            LDLSYN LKG +PG+LSSA Y+GHLDLSHNHLCG+IP+G+PFDHLEASSFS+NDCLCGNP
Sbjct: 302  LDLSYNNLKGPIPGSLSSAAYVGHLDLSHNHLCGTIPVGTPFDHLEASSFSFNDCLCGNP 361

Query: 1145 LKIC 1156
            LK C
Sbjct: 362  LKTC 365


Top