BLASTX nr result

ID: Glycyrrhiza23_contig00004299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004299
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   189   3e-46
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]   188   3e-46
ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]   188   4e-46
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   187   1e-45
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...   186   1e-45

>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/119 (78%), Positives = 99/119 (83%)
 Frame = -1

Query: 359 QPSDGANSSFTNYGLSGYAGNPAAASLMANQLGTGNLPPLFENVXXXXXXXXSGMDSRIL 180
           QP DG NSSFTNYG+SGYAGNPA ASLM NQLGTGNLPPLF+NV         GMDSRIL
Sbjct: 464 QPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFQNVAAASAMAAPGMDSRIL 523

Query: 179 GGSLASGVASPSDVHTLGRMGNQIAGVALQAPFVDPMYLQYMRTSEYAAAQRAALNDPS 3
           G  LASG A+PSDVH LGRMGNQI G ALQAPFVDPMYLQY+RTSE+AAAQ AALNDPS
Sbjct: 524 GCGLASGTAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTSEFAAAQLAALNDPS 582


>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1033

 Score =  188 bits (478), Expect = 3e-46
 Identities = 94/119 (78%), Positives = 98/119 (82%)
 Frame = -1

Query: 359 QPSDGANSSFTNYGLSGYAGNPAAASLMANQLGTGNLPPLFENVXXXXXXXXSGMDSRIL 180
           QP DG NSSFTNYG+SGYAGNPA ASLM NQLGTGNLPPLFENV          MDSRIL
Sbjct: 444 QPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMAAPRMDSRIL 503

Query: 179 GGSLASGVASPSDVHTLGRMGNQIAGVALQAPFVDPMYLQYMRTSEYAAAQRAALNDPS 3
           GG LASG A+PSDVH LGRMGNQI G ALQAPFVDPMYLQY+RT E+AAAQ AALNDPS
Sbjct: 504 GGGLASGAAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTPEFAAAQLAALNDPS 562


>ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1049

 Score =  188 bits (477), Expect = 4e-46
 Identities = 94/119 (78%), Positives = 98/119 (82%)
 Frame = -1

Query: 359 QPSDGANSSFTNYGLSGYAGNPAAASLMANQLGTGNLPPLFENVXXXXXXXXSGMDSRIL 180
           QP D  NSSF NYGLSGYAGNPA ASLM NQLGTGNLPPLFENV         GMDSRIL
Sbjct: 460 QPLDSTNSSFGNYGLSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMAAPGMDSRIL 519

Query: 179 GGSLASGVASPSDVHTLGRMGNQIAGVALQAPFVDPMYLQYMRTSEYAAAQRAALNDPS 3
           GG LASG A+PSDVH LGRMGNQI G ALQAPFVDPMYLQY+RTSE+AAAQ AALNDP+
Sbjct: 520 GGGLASGAAAPSDVHNLGRMGNQIPGSALQAPFVDPMYLQYLRTSEFAAAQLAALNDPA 578


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  187 bits (474), Expect = 1e-45
 Identities = 94/119 (78%), Positives = 97/119 (81%)
 Frame = -1

Query: 359 QPSDGANSSFTNYGLSGYAGNPAAASLMANQLGTGNLPPLFENVXXXXXXXXSGMDSRIL 180
           QP D  NSSF NYGLSGYAGNPA ASLM NQLGTGNLPPLFENV         GMD RIL
Sbjct: 458 QPLDSTNSSFGNYGLSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMASPGMDLRIL 517

Query: 179 GGSLASGVASPSDVHTLGRMGNQIAGVALQAPFVDPMYLQYMRTSEYAAAQRAALNDPS 3
           GG LASG A+PSDVH LGRMGNQI G ALQAPFVDPMYLQY+RTSE+AAAQ AALNDPS
Sbjct: 518 GGGLASGAAAPSDVHNLGRMGNQIPGSALQAPFVDPMYLQYLRTSEFAAAQLAALNDPS 576


>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
           gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP
           [Medicago truncatula] gi|355486444|gb|AES67647.1|
           Pumilio-like protein [Medicago truncatula]
          Length = 1047

 Score =  186 bits (473), Expect = 1e-45
 Identities = 95/120 (79%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = -1

Query: 359 QPSDGANSSFTNYGLSG-YAGNPAAASLMANQLGTGNLPPLFENVXXXXXXXXSGMDSRI 183
           QPSDG+NS F NYGLSG YAGNPA AS MANQLGTGN+PPLFENV         GMDSRI
Sbjct: 459 QPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRI 518

Query: 182 LGGSLASGVASPSDVHTLGRMGNQIAGVALQAPFVDPMYLQYMRTSEYAAAQRAALNDPS 3
           LGG L SGVASPSDVH L RMGNQIAG ALQ+P+VDPMYLQYMRT EYAAAQ AALNDPS
Sbjct: 519 LGGGLPSGVASPSDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPS 578


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