BLASTX nr result

ID: Glycyrrhiza23_contig00004298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004298
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   515   e-144
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...   500   e-139
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   475   e-131
ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]   466   e-129
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   458   e-126

>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  515 bits (1327), Expect = e-144
 Identities = 277/409 (67%), Positives = 297/409 (72%), Gaps = 5/409 (1%)
 Frame = -3

Query: 1213 GIGDRRNVSRADDNGGRSLFANPPGFNMRKREGEVDNEKMRGSAEWXXXXXXXXXXXXXG 1034
            GIGDRR V+RADDNGGRSLFA PPGFNMRK+E EV++E  RGSAEW             G
Sbjct: 146  GIGDRRKVNRADDNGGRSLFATPPGFNMRKQESEVESENPRGSAEWGGDGLIGLPGLGLG 205

Query: 1033 SKQKSLAEIFQDDLGRNTSVTGFPSRPASRNAFDENVDILTSAEAELAHLCHDSSATDAF 854
            SKQKSLAEIFQDDLG N SVTGFPSRPASRNAFDEN DI++S E+ELAHL  DS ATD  
Sbjct: 206  SKQKSLAEIFQDDLGLNASVTGFPSRPASRNAFDENGDIISSVESELAHLRRDSLATDTL 265

Query: 853  RSGSNVTGSSAAQNVGPQXXXXXXXXXXXXXXXSTTPDPQLVARAASPCPTPIGGGRVIA 674
            RS SNV  SSAAQN GPQ               STTPDPQLVARA SPCPTPIGGGRV+A
Sbjct: 266  RSVSNVPVSSAAQNTGPQASYSYAAALGSSLSRSTTPDPQLVARAPSPCPTPIGGGRVVA 325

Query: 673  AEKRGITSPDAFNDVSSGINGSADIVAALSGMNLSSD----GDNHFPSQVESDVDNHQRY 506
            AEKRGI SPDAFN VSSG+N  ADIVAALSGMNLS+D    GD+HFPSQVESDVDNHQRY
Sbjct: 326  AEKRGINSPDAFNGVSSGVNEPADIVAALSGMNLSADDVLDGDSHFPSQVESDVDNHQRY 385

Query: 505  LFGMQGGQDHGKQHAYLKKSESGHLQKTAYPXXXXXXXXXXXXKNPSFDRQVEQHKSAIS 326
            LFGMQGGQD GKQHAYLKKSESGHL K+AY              NPS DR  E  K A+ 
Sbjct: 386  LFGMQGGQDPGKQHAYLKKSESGHLHKSAYSDSGKNGGSMSDINNPSLDRHAELQKCAVP 445

Query: 325  PNNSYFRXXXXXXXXXXXXXPAQYHYSDGANSSFTNYGLSGYAGNPGAASLMASQHGTGN 146
            PNNSYF+             PAQY   DG NS+FT YGLSGYAGNP  ASL+ASQ GT N
Sbjct: 446  PNNSYFKGSPTSAFSGGGGVPAQYSPLDGTNSAFTYYGLSGYAGNPALASLVASQLGTSN 505

Query: 145  MPPLFENVXXXXXXXXSGMDSRILGGGLASGIASPSDVHTL-RMGNQIA 2
            +PPLFENV         GMDSRILGGGL+SG+A+PSDVH   RMGNQIA
Sbjct: 506  LPPLFENVAAASVMAAPGMDSRILGGGLSSGVAAPSDVHGHGRMGNQIA 554


>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] gi|87241276|gb|ABD33134.1|
            Nucleic acid binding NABP [Medicago truncatula]
            gi|355486444|gb|AES67647.1| Pumilio-like protein
            [Medicago truncatula]
          Length = 1047

 Score =  500 bits (1287), Expect = e-139
 Identities = 273/412 (66%), Positives = 298/412 (72%), Gaps = 8/412 (1%)
 Frame = -3

Query: 1213 GIGDRRNVSRADDNGGRSLFANPPGFNMRKREGEV-DNEKMRGSAEWXXXXXXXXXXXXX 1037
            GIGDRR V+ AD+NGGR++FA PPGFN RKRE EV  +EK+RGSAEW             
Sbjct: 138  GIGDRRKVNGADENGGRAVFATPPGFNNRKRETEVVADEKIRGSAEWGGDGLIGLPGLGL 197

Query: 1036 GSKQKSLAEIFQDDLGRNTSVTGFPSRPASRNAFDENVDILTSAEAELAHLCHDSSATDA 857
            G+KQKSLAEIFQDD+G NTSVTGFPSRPASRN FDENV+I +SAEAELAHL HDSSATD 
Sbjct: 198  GTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNTFDENVEITSSAEAELAHLRHDSSATDG 257

Query: 856  FRSGSNVTGSSAAQNVGPQXXXXXXXXXXXXXXXS-TTPDPQLVARAASPCPTPIGGGRV 680
             R GSNV GS A+QN GPQ                 TTPDPQ VARA SPCPTPIG GRV
Sbjct: 258  LRFGSNVQGSPASQNAGPQVSYSYAAALGGSSLSRSTTPDPQHVARAPSPCPTPIGSGRV 317

Query: 679  IAAEKRGITSPDAFNDVSSGINGSADIVAALSGMNLSSD----GDNHFPSQVESDVDNHQ 512
            +AAEKRGITSPD      SGINGSADI +ALSGMNLS+D    GDNHFPSQVESDV+N+Q
Sbjct: 318  VAAEKRGITSPDV-----SGINGSADIASALSGMNLSTDDALEGDNHFPSQVESDVNNYQ 372

Query: 511  RYLFGMQGGQDHGKQHAYLKKSESGHLQKTAYPXXXXXXXXXXXXKNPSFDRQVEQHKSA 332
            RYLFGMQGGQDHGKQHAYLKK+ESGH+ KTA+             ++PS DRQVE  KSA
Sbjct: 373  RYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHSDSGKRSGSGSDMRSPSLDRQVEHQKSA 432

Query: 331  ISPNNSYFRXXXXXXXXXXXXXPAQYHYSDGANSSFTNYGLS-GYAGNPGAASLMASQHG 155
            +SPNN YF              PAQY  SDG+NS F NYGLS GYAGNP  AS MA+Q G
Sbjct: 433  VSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLG 492

Query: 154  TGNMPPLFENVXXXXXXXXSGMDSRILGGGLASGIASPSDVHTL-RMGNQIA 2
            TGNMPPLFENV         GMDSRILGGGL SG+ASPSDVH L RMGNQIA
Sbjct: 493  TGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASPSDVHVLSRMGNQIA 544


>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  475 bits (1222), Expect = e-131
 Identities = 261/408 (63%), Positives = 285/408 (69%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1213 GIGDRRNVSRADDNGGRSLFANPPGFNMRKREGEVDNEKMRGSAEWXXXXXXXXXXXXXG 1034
            GIGDRR V+R DDN GR LFA PPGFNMRK E EVDNEK RGSAEW              
Sbjct: 147  GIGDRRKVNRTDDNAGRLLFATPPGFNMRKLESEVDNEKTRGSAEWGGDGLIGLPGLGL- 205

Query: 1033 SKQKSLAEIFQDDLGRNTSVTGFPSRPASRNAFDENVDILTSAEAELAHLCHDSSATDAF 854
            SKQKS AE FQDDLG NTS+T  PSRPASRNAFDEN DI++SAE ELAH+  +S+ TDA 
Sbjct: 206  SKQKSFAEFFQDDLGHNTSITRLPSRPASRNAFDEN-DIISSAEPELAHVRRESTPTDAL 264

Query: 853  RSGSNVTGSSAAQNVGPQXXXXXXXXXXXXXXXSTTPDPQLVARAASPCPTPIGGGRVIA 674
            RSGSNV GSSAAQNVG                 STTPDPQL+ARA SPC TPIGGGR IA
Sbjct: 265  RSGSNVQGSSAAQNVGLPASYSYAAAVGSSLSRSTTPDPQLIARAPSPCITPIGGGRAIA 324

Query: 673  AEKRGITSPDAFNDVSSGINGSADIVAALSGMNLSSD----GDNHFPSQVESDVDNHQRY 506
            ++KR I +PDAFN VSSGIN SAD+VAALS MNLS+D    G+NHFPSQVESDVD+HQRY
Sbjct: 325  SDKRAIANPDAFNGVSSGINESADLVAALSVMNLSADDVLDGENHFPSQVESDVDSHQRY 384

Query: 505  LFGMQGGQDHGKQHAYLKKSESGHLQKTAYPXXXXXXXXXXXXKNPSFDRQVEQHKSAIS 326
            LFG QGGQDHGKQ AYLKKSES HLQ ++               NPS DRQVE  KS + 
Sbjct: 385  LFGRQGGQDHGKQQAYLKKSESAHLQNSS-----KSSRSGSGLNNPSLDRQVELQKSTVP 439

Query: 325  PNNSYFRXXXXXXXXXXXXXPAQYHYSDGANSSFTNYGLSGYAGNPGAASLMASQHGTGN 146
             NNSYF+             P QY   DG NSSFTNYG+SGYAGNP  ASLM +Q GTGN
Sbjct: 440  SNNSYFKGSPTSHFSGGGSMPPQYQPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGN 499

Query: 145  MPPLFENVXXXXXXXXSGMDSRILGGGLASGIASPSDVHTL-RMGNQI 5
            +PPLF+NV         GMDSRILG GLASG A+PSDVH L RMGNQI
Sbjct: 500  LPPLFQNVAAASAMAAPGMDSRILGCGLASGTAAPSDVHNLGRMGNQI 547


>ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  466 bits (1199), Expect = e-129
 Identities = 257/408 (62%), Positives = 282/408 (69%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1213 GIGDRRNVSRADDNGGRSLFANPPGFNMRKREGEVDNEKMRGSAEWXXXXXXXXXXXXXG 1034
            GIGDRR VSR DDN GRS F+ PPGFNMRK+EGEVDNE+ RGS+EW              
Sbjct: 141  GIGDRRKVSRTDDNSGRSPFSTPPGFNMRKQEGEVDNEETRGSSEWGGDGLIGLPGLGL- 199

Query: 1033 SKQKSLAEIFQDDLGRNTSVTGFPSRPASRNAFDENVDILTSAEAELAHLCHDSSATDAF 854
            SKQKS AEIFQ+DLG  TS+   PS PASR+AFD+N DI +SAEAELAH C +S ATDA 
Sbjct: 200  SKQKSFAEIFQEDLGHITSIACLPSHPASRDAFDDN-DITSSAEAELAHACRESMATDAL 258

Query: 853  RSGSNVTGSSAAQNVGPQXXXXXXXXXXXXXXXSTTPDPQLVARAASPCPTPIGGGRVIA 674
            RSGSNV GSSAAQNV P                STTPDPQLVARA SPC TP+GGGR IA
Sbjct: 259  RSGSNVQGSSAAQNVVPPASYSYAAAVGSSLSRSTTPDPQLVARAPSPCITPMGGGRAIA 318

Query: 673  AEKRGITSPDAFNDVSSGINGSADIVAALSGMNLSSD----GDNHFPSQVESDVDNHQRY 506
            ++KR I SPDAFN VSSG+N SAD+VAALS MNLS+D    G+NHFPSQVESDVDNHQRY
Sbjct: 319  SDKRAIVSPDAFNGVSSGVNESADLVAALSVMNLSADDVLDGENHFPSQVESDVDNHQRY 378

Query: 505  LFGMQGGQDHGKQHAYLKKSESGHLQKTAYPXXXXXXXXXXXXKNPSFDRQVEQHKSAIS 326
            LFG QG QDHGKQHAYLKKSES HLQ ++               N S DRQVE  KS + 
Sbjct: 379  LFGRQGSQDHGKQHAYLKKSESAHLQNSS-----KNNRSGSDLNNLSLDRQVELQKSTVP 433

Query: 325  PNNSYFRXXXXXXXXXXXXXPAQYHYSDGANSSFTNYGLSGYAGNPGAASLMASQHGTGN 146
             NNSYF+             P QY   D  NSSF NYGLSGYAGNP  ASLM +Q GTGN
Sbjct: 434  SNNSYFKGLSTSHFSRGGSMPPQYQPLDSTNSSFGNYGLSGYAGNPALASLMTNQLGTGN 493

Query: 145  MPPLFENVXXXXXXXXSGMDSRILGGGLASGIASPSDVHTL-RMGNQI 5
            +PPLFENV         GM SRILGGGLASG A+PSDVH + RMGNQI
Sbjct: 494  LPPLFENVAAASAMASPGMRSRILGGGLASGAAAPSDVHNIGRMGNQI 541


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  458 bits (1178), Expect = e-126
 Identities = 256/408 (62%), Positives = 277/408 (67%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1213 GIGDRRNVSRADDNGGRSLFANPPGFNMRKREGEVDNEKMRGSAEWXXXXXXXXXXXXXG 1034
            GIGDRR V+R DDNGGR LF  PPGFNMRK+E EVDNEK RGSAEW              
Sbjct: 146  GIGDRRKVNRTDDNGGRLLFPTPPGFNMRKQESEVDNEKTRGSAEWGGDGLIGLPGLGL- 204

Query: 1033 SKQKSLAEIFQDDLGRNTSVTGFPSRPASRNAFDENVDILTSAEAELAHLCHDSSATDAF 854
            SKQKS AEIFQDDLG NTS+   PSRP+SRNAFDEN DI +SA+AELAH+  +S+  D  
Sbjct: 205  SKQKSFAEIFQDDLGHNTSIARLPSRPSSRNAFDEN-DISSSADAELAHVHRESTPADVL 263

Query: 853  RSGSNVTGSSAAQNVGPQXXXXXXXXXXXXXXXSTTPDPQLVARAASPCPTPIGGGRVIA 674
            RSGS     SAAQNVGP                STTPDPQLVARA SPC TPIGGGR IA
Sbjct: 264  RSGS-----SAAQNVGPPASYSYAAAVGSSLSRSTTPDPQLVARAPSPCITPIGGGRAIA 318

Query: 673  AEKRGITSPDAFNDVSSGINGSADIVAALSGMNLSSD----GDNHFPSQVESDVDNHQRY 506
            ++KR I S DAFN VSSGIN SAD+VAALS MNLS+D    G+NH PSQVESDVDNHQRY
Sbjct: 319  SDKRAIASQDAFNGVSSGINESADLVAALSVMNLSADDVLDGENHLPSQVESDVDNHQRY 378

Query: 505  LFGMQGGQDHGKQHAYLKKSESGHLQKTAYPXXXXXXXXXXXXKNPSFDRQVEQHKSAIS 326
            LFG QGGQ+HGKQHAYLKKSES HLQ +                NPS DRQVE  KS + 
Sbjct: 379  LFGRQGGQEHGKQHAYLKKSESAHLQNSR-----ASSRSGSDLNNPSLDRQVELQKSTVP 433

Query: 325  PNNSYFRXXXXXXXXXXXXXPAQYHYSDGANSSFTNYGLSGYAGNPGAASLMASQHGTGN 146
             NNSYF+             P QY   D  NSSF NYGLSGYAGNP  ASLM +Q GTGN
Sbjct: 434  SNNSYFKGSPTSHFSRGGSMPPQYQPLDSTNSSFGNYGLSGYAGNPALASLMTNQLGTGN 493

Query: 145  MPPLFENVXXXXXXXXSGMDSRILGGGLASGIASPSDVHTL-RMGNQI 5
            +PPLFENV         GMD RILGGGLASG A+PSDVH L RMGNQI
Sbjct: 494  LPPLFENVAAASAMASPGMDLRILGGGLASGAAAPSDVHNLGRMGNQI 541


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