BLASTX nr result

ID: Glycyrrhiza23_contig00004297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004297
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...   608   e-172
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   586   e-165
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   584   e-164
ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]   583   e-164
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   582   e-164

>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] gi|87241276|gb|ABD33134.1|
            Nucleic acid binding NABP [Medicago truncatula]
            gi|355486444|gb|AES67647.1| Pumilio-like protein
            [Medicago truncatula]
          Length = 1047

 Score =  608 bits (1569), Expect = e-172
 Identities = 303/354 (85%), Positives = 318/354 (89%), Gaps = 1/354 (0%)
 Frame = -3

Query: 1060 PAQYQPSDGANSSFSNYGLSG-YAGNPAAASLMASQLGTGNLPTRFDNVXXXXXXXXSGM 884
            PAQYQPSDG+NS F+NYGLSG YAGNPA AS MA+QLGTGN+P  F+NV         GM
Sbjct: 455  PAQYQPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMVSPGM 514

Query: 883  DSRIXXXXXXXXXXXXSDVHTLSRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAAL 704
            DSRI            SDVH LSRMGNQIAGGALQ+P+VDPMYLQYMRT EYAAAQLAAL
Sbjct: 515  DSRILGGGLPSGVASPSDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAAL 574

Query: 703  NDPSVDRNYLGNSYMNLLELQKAYLGTMLSPQKSQYNVPMGGKSGGSNHHGYYGNPAYGV 524
            NDPSVDRNYLGNSYMNLLELQKAYLG++LSPQKSQYNVP+GGKSGGSNHHGYYGNP YGV
Sbjct: 575  NDPSVDRNYLGNSYMNLLELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPTYGV 634

Query: 523  GLSYPGSPMANSLSTSPVGSGSPIRHNDLNMRYASGMRNVAGVMGPWHLDIGNMDENFAA 344
            GLSYPGSPMANSLSTSPVGSGSPIRHNDLNM +ASGMRNVAGVM PWHLD  N+DENFA+
Sbjct: 635  GLSYPGSPMANSLSTSPVGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAVNVDENFAS 694

Query: 343  SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETANTEEKNMVYQEIMPHAL 164
            SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETA TEEKNMVYQEI PHAL
Sbjct: 695  SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHAL 754

Query: 163  ALMTDVFGNYVVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAIEV 2
            ALMTDVFGNYVVQKFFEHGLASQ+RELANKL+GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 755  ALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEV 808



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -3

Query: 304  FELSEISGHVVEFSADQYGSRFIQQKLETA-NTEEKNMVYQEIMPHALALMTDVFGNYVV 128
            F +S     VV  S   YG R IQ+ LE   N + +  V  EI+     L  D +GNYVV
Sbjct: 852  FIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVV 911

Query: 127  QKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAI 8
            Q   EHG   ++  +  +L G+++ +S Q +   V++K +
Sbjct: 912  QHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCL 951


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  586 bits (1510), Expect = e-165
 Identities = 299/353 (84%), Positives = 311/353 (88%)
 Frame = -3

Query: 1060 PAQYQPSDGANSSFSNYGLSGYAGNPAAASLMASQLGTGNLPTRFDNVXXXXXXXXSGMD 881
            PAQY P DG NS+F+ YGLSGYAGNPA ASL+ASQLGT NLP  F+NV         GMD
Sbjct: 466  PAQYSPLDGTNSAFTYYGLSGYAGNPALASLVASQLGTSNLPPLFENVAAASVMAAPGMD 525

Query: 880  SRIXXXXXXXXXXXXSDVHTLSRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALN 701
            SRI            SDVH   RMGNQIAGGALQAPFVDPMYLQY+R+SE AAAQLAALN
Sbjct: 526  SRILGGGLSSGVAAPSDVHGHGRMGNQIAGGALQAPFVDPMYLQYIRSSELAAAQLAALN 585

Query: 700  DPSVDRNYLGNSYMNLLELQKAYLGTMLSPQKSQYNVPMGGKSGGSNHHGYYGNPAYGVG 521
            DPSVDRNYLGNSYMNLLELQKAYLGT+LSPQKSQYNVP+  KSGGSNH GYYGNPAYG  
Sbjct: 586  DPSVDRNYLGNSYMNLLELQKAYLGTLLSPQKSQYNVPLSAKSGGSNH-GYYGNPAYG-- 642

Query: 520  LSYPGSPMANSLSTSPVGSGSPIRHNDLNMRYASGMRNVAGVMGPWHLDIGNMDENFAAS 341
            LSYPGSPMANSLSTSPVGSGSPIRHNDLNMR+ASGMRN+AGVMGPWHLD GNMDENFA+S
Sbjct: 643  LSYPGSPMANSLSTSPVGSGSPIRHNDLNMRFASGMRNLAGVMGPWHLDAGNMDENFASS 702

Query: 340  LLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETANTEEKNMVYQEIMPHALA 161
            LLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETA TEEKNMVYQEIMP ALA
Sbjct: 703  LLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALA 762

Query: 160  LMTDVFGNYVVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAIEV 2
            LMTDVFGNYVVQKFFEHGLASQ+RELANKLF HVLTLSLQMYGCRVIQKAIEV
Sbjct: 763  LMTDVFGNYVVQKFFEHGLASQRRELANKLFEHVLTLSLQMYGCRVIQKAIEV 815



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/116 (31%), Positives = 57/116 (49%)
 Frame = -3

Query: 352  FAASLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETANTEEKNMVYQEIMP 173
            F   L  + +    K FE      HV+  S   YG R IQ+ +E  + ++K  + QE+  
Sbjct: 777  FEHGLASQRRELANKLFE------HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG 830

Query: 172  HALALMTDVFGNYVVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAIE 5
            + +  + D  GN+V+QK  E         + +  F  V+TLS   YGCRVIQ+ +E
Sbjct: 831  NIMRCVRDQNGNHVIQKCIECVPEDAINFIVSTFFDQVVTLSTHPYGCRVIQRVLE 886



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
 Frame = -3

Query: 304  FELSEISGHVVEFSADQYGSRFIQQKLETA---NTEEKNMVYQEIMPHALALMTDVFGNY 134
            F +S     VV  S   YG R IQ+ LE     NT++K  V  EI+     L  D +GNY
Sbjct: 859  FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK--VMDEILGAVSMLAQDQYGNY 916

Query: 133  VVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAI 8
            VVQ   EHG   ++  +  +L G ++ +S Q +   V++K +
Sbjct: 917  VVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCL 958


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  584 bits (1505), Expect = e-164
 Identities = 290/354 (81%), Positives = 310/354 (87%), Gaps = 1/354 (0%)
 Frame = -3

Query: 1060 PAQYQPSDGANSSFSNYGLSGYAGNPAAASLMASQLGTGNLPTRFDNVXXXXXXXXSGMD 881
            P QYQP D  NSSF NYGLSGYAGNPA ASLM +QLGTGNLP  F+NV         GMD
Sbjct: 454  PPQYQPLDSTNSSFGNYGLSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMASPGMD 513

Query: 880  SRIXXXXXXXXXXXXSDVHTLSRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALN 701
             RI            SDVH L RMGNQI G ALQAPFVDPMYLQY+RTSE+AAAQLAALN
Sbjct: 514  LRILGGGLASGAAAPSDVHNLGRMGNQIPGSALQAPFVDPMYLQYLRTSEFAAAQLAALN 573

Query: 700  DPSVDRNYLGNSYMNLLELQKAYLGTMLSPQKSQYNVPMGGKSGGSNHHGYYGNPAYGVG 521
            DPSVDRNYLGNSYMNLLELQKAYLG++LSPQKSQYNVP+GGKSG S  HGYYGNPAYGVG
Sbjct: 574  DPSVDRNYLGNSYMNLLELQKAYLGSILSPQKSQYNVPLGGKSGSSTPHGYYGNPAYGVG 633

Query: 520  LSYPGSPMANSL-STSPVGSGSPIRHNDLNMRYASGMRNVAGVMGPWHLDIGNMDENFAA 344
            +SYPGSPMANS+ STSPVGS SP+RHN+LNMR+ASGMRN+AGVMGPWH D GN+DE+FA+
Sbjct: 634  MSYPGSPMANSVVSTSPVGSASPVRHNELNMRFASGMRNLAGVMGPWHADTGNIDESFAS 693

Query: 343  SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETANTEEKNMVYQEIMPHAL 164
            SLLEEFK+NKTKCFELSEI+GHVVEFSADQYGSRFIQQKLETA TEEKNMVYQEIMPH+L
Sbjct: 694  SLLEEFKTNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSL 753

Query: 163  ALMTDVFGNYVVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAIEV 2
            ALMTDVFGNYVVQKFFEHGLASQ+RELANKL GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 754  ALMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEV 807


>ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1049

 Score =  583 bits (1502), Expect = e-164
 Identities = 290/354 (81%), Positives = 311/354 (87%), Gaps = 1/354 (0%)
 Frame = -3

Query: 1060 PAQYQPSDGANSSFSNYGLSGYAGNPAAASLMASQLGTGNLPTRFDNVXXXXXXXXSGMD 881
            P QYQP D  NSSF NYGLSGYAGNPA ASLM +QLGTGNLP  F+NV         GMD
Sbjct: 456  PPQYQPLDSTNSSFGNYGLSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMAAPGMD 515

Query: 880  SRIXXXXXXXXXXXXSDVHTLSRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALN 701
            SRI            SDVH L RMGNQI G ALQAPFVDPMYLQY+RTSE+AAAQLAALN
Sbjct: 516  SRILGGGLASGAAAPSDVHNLGRMGNQIPGSALQAPFVDPMYLQYLRTSEFAAAQLAALN 575

Query: 700  DPSVDRNYLGNSYMNLLELQKAYLGTMLSPQKSQYNVPMGGKSGGSNHHGYYGNPAYGVG 521
            DP+VDRNYLGNSYMNLLELQKAYLG++LSPQKSQYNVP+GGKSG S  HGYYGNPAYGVG
Sbjct: 576  DPAVDRNYLGNSYMNLLELQKAYLGSILSPQKSQYNVPLGGKSGSSTPHGYYGNPAYGVG 635

Query: 520  LSYPGSPMANSL-STSPVGSGSPIRHNDLNMRYASGMRNVAGVMGPWHLDIGNMDENFAA 344
            LSYPG+ MANS+ STSPVGSGSPIRHN+LNM++ASGMRN+AG MGPWH+D GN+DE+FA+
Sbjct: 636  LSYPGTAMANSVVSTSPVGSGSPIRHNELNMQFASGMRNLAGAMGPWHVDTGNIDESFAS 695

Query: 343  SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETANTEEKNMVYQEIMPHAL 164
            SLLEEFKSNKTKCFELSEI+GHVVEFSADQYGSRFIQQKLETA TEEKN+VYQEIMPHAL
Sbjct: 696  SLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHAL 755

Query: 163  ALMTDVFGNYVVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAIEV 2
            ALMTDVFGNYVVQKFFEHGLASQ+RELANKL GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 756  ALMTDVFGNYVVQKFFEHGLASQRRELANKLHGHVLTLSLQMYGCRVIQKAIEV 809


>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  582 bits (1501), Expect = e-164
 Identities = 291/354 (82%), Positives = 309/354 (87%), Gaps = 1/354 (0%)
 Frame = -3

Query: 1060 PAQYQPSDGANSSFSNYGLSGYAGNPAAASLMASQLGTGNLPTRFDNVXXXXXXXXSGMD 881
            P QYQP DG NSSF+NYG+SGYAGNPA ASLM +QLGTGNLP  F NV         GMD
Sbjct: 460  PPQYQPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFQNVAAASAMAAPGMD 519

Query: 880  SRIXXXXXXXXXXXXSDVHTLSRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALN 701
            SRI            SDVH L RMGNQI G ALQAPFVDPMYLQY+RTSE+AAAQLAALN
Sbjct: 520  SRILGCGLASGTAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTSEFAAAQLAALN 579

Query: 700  DPSVDRNYLGNSYMNLLELQKAYLGTMLSPQKSQYNVPMGGKSGGSNHHGYYGNPAYGVG 521
            DPSVDRNYLGNSYMNLLELQKAYLG++LSPQKSQYNVP GGKSG    HGYYGNPAYG G
Sbjct: 580  DPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNVPPGGKSGSFTPHGYYGNPAYGAG 639

Query: 520  LSYPGSPMANSL-STSPVGSGSPIRHNDLNMRYASGMRNVAGVMGPWHLDIGNMDENFAA 344
            LSYPGSPMANS+ STSPVGSGSP+RHN+LNM +ASGMRN+AGVMGPWH+D  N+DE+FA+
Sbjct: 640  LSYPGSPMANSVVSTSPVGSGSPVRHNELNMHFASGMRNLAGVMGPWHVDNENIDESFAS 699

Query: 343  SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETANTEEKNMVYQEIMPHAL 164
            SLLEEFKSNKTKCFELSEI+GHVVEFSADQYGSRFIQQKLETA TEEKNMVYQEIMPHAL
Sbjct: 700  SLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHAL 759

Query: 163  ALMTDVFGNYVVQKFFEHGLASQKRELANKLFGHVLTLSLQMYGCRVIQKAIEV 2
            ALMTDVFGNYVVQKFFEHGLASQ+RELANKL GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 760  ALMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEV 813


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