BLASTX nr result

ID: Glycyrrhiza23_contig00004295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004295
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   603   e-170
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   592   e-167
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   578   e-162
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   458   e-126
ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   452   e-124

>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  603 bits (1556), Expect = e-170
 Identities = 300/354 (84%), Positives = 318/354 (89%)
 Frame = -3

Query: 1502 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 1323
            MAVTA SE   IHRFPQYKYIDAVRWLPVLSAFNRFAV+A+ DFDS+ SSIEIHSFKPNP
Sbjct: 1    MAVTANSE---IHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57

Query: 1322 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSGSLHFLFADSTDATLESEVSVPEDA 1143
            LSFEFQSSW SPS +SS+K+SQFLQK+IIA+STSSGSLHFLFADSTDA L SEVSVPE+ 
Sbjct: 58   LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENE 117

Query: 1142 LHSVPESCIDLMEGGVECVTVGEDGRVNLVTVANSNLNYRRLFDSGGLVSYTAAKWASPM 963
            LH   + CIDLM+GGVECVTVG+DGR+NLVTV +SNLNYRRLFDSGGLVSYT+ KWASP+
Sbjct: 118  LHLEGKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPV 177

Query: 962  EFATGGYGFGLQWWDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGT 783
            EFATGGYGFGL WWDQRKPGGPVSQFKGNWD+ L SGIVHSIDIHPSRKHTCLA GSLGT
Sbjct: 178  EFATGGYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGT 237

Query: 782  VLAWDLRWQQQPIILSXXXXXXXXXXXAVQSISESEVWEVQYDRCIKPNTSSTRILPAMI 603
            VLAWDLR QQQPIILS           AVQSISESEVWEVQYDRCIK NTSSTRILPAMI
Sbjct: 238  VLAWDLRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKSNTSSTRILPAMI 297

Query: 602  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSFEWEAVAILTRQ 441
            CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNP DVICS EWE+VAILTRQ
Sbjct: 298  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTRQ 351


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  592 bits (1526), Expect = e-167
 Identities = 294/354 (83%), Positives = 312/354 (88%)
 Frame = -3

Query: 1502 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 1323
            MA TAI       RFPQ+KY+DAVRWLP+ SAF+RFAV+A  DFDSDASSIEIHS  PNP
Sbjct: 1    MAATAIQ------RFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPNP 54

Query: 1322 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSGSLHFLFADSTDATLESEVSVPEDA 1143
            LS E  SSW+SPSRVSSLKAS FLQK +I ASTSSGSLHFLF+DS+ ATLESEVS+PE A
Sbjct: 55   LSLEPHSSWSSPSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEGA 114

Query: 1142 LHSVPESCIDLMEGGVECVTVGEDGRVNLVTVANSNLNYRRLFDSGGLVSYTAAKWASPM 963
            LHSVP SC+DL++GGVECVTVGEDG+VNLV + +SNLNYRRLFDS GLVSYTA  WASPM
Sbjct: 115  LHSVPASCVDLLDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPM 174

Query: 962  EFATGGYGFGLQWWDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGT 783
            EFATGGYGFGL WWDQRKPGGPVSQFKGNWD+KL SGIVHSIDIHPSRKHTCLAGGSLGT
Sbjct: 175  EFATGGYGFGLHWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGT 234

Query: 782  VLAWDLRWQQQPIILSXXXXXXXXXXXAVQSISESEVWEVQYDRCIKPNTSSTRILPAMI 603
            V AWDLRWQQQPIILS           AVQSISESEVWEVQYDRCIKPNTSSTRILP+MI
Sbjct: 235  VFAWDLRWQQQPIILS-GAGAGAGGNTAVQSISESEVWEVQYDRCIKPNTSSTRILPSMI 293

Query: 602  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSFEWEAVAILTRQ 441
            CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICS EWEAVAILTRQ
Sbjct: 294  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTRQ 347


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  578 bits (1489), Expect = e-162
 Identities = 286/356 (80%), Positives = 311/356 (87%)
 Frame = -3

Query: 1508 LAMAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKP 1329
            +A A TAI       RFPQ++Y+DAVRWLP+ SAF+RFAV+A  DFDSDASSIEIH+   
Sbjct: 1    MAAATTAIQ------RFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQ 54

Query: 1328 NPLSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSGSLHFLFADSTDATLESEVSVPE 1149
            NP S E  SSW+SPSRVSSLK S FLQK +I ASTSSGSLHFLF+DS+DA+L SEVS+PE
Sbjct: 55   NPFSLEPHSSWSSPSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPE 114

Query: 1148 DALHSVPESCIDLMEGGVECVTVGEDGRVNLVTVANSNLNYRRLFDSGGLVSYTAAKWAS 969
             ALHS+P SC+DLM+GGVECV+VGEDG+VNLV + +SNLNYRRLFDS GLVSYTA +WAS
Sbjct: 115  GALHSLPASCVDLMDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWAS 174

Query: 968  PMEFATGGYGFGLQWWDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSL 789
            PMEFATGG+GFGLQWWDQRKPGGPVSQFKGNWD+KL SGIVHSIDIHPSRKHTCLAGGSL
Sbjct: 175  PMEFATGGFGFGLQWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSL 234

Query: 788  GTVLAWDLRWQQQPIILSXXXXXXXXXXXAVQSISESEVWEVQYDRCIKPNTSSTRILPA 609
            GTV AWDLRWQQQPIILS           AVQSISESEVWEVQYDRCIK NTSSTRILP+
Sbjct: 235  GTVFAWDLRWQQQPIILS----GAGAANTAVQSISESEVWEVQYDRCIKSNTSSTRILPS 290

Query: 608  MICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSFEWEAVAILTRQ 441
            MICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICS EWEAVAILTRQ
Sbjct: 291  MICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTRQ 346


>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
            gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
            Nup43-like [Cucumis sativus]
          Length = 350

 Score =  458 bits (1179), Expect = e-126
 Identities = 234/357 (65%), Positives = 268/357 (75%), Gaps = 4/357 (1%)
 Frame = -3

Query: 1502 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 1323
            MA+ +  +  QIHRFPQ+KY+D VRWLP LSAF+RFAVIA  D DSD+SSIEIHS   NP
Sbjct: 1    MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 1322 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSGSLHFLFADSTDATLESEVSVPEDA 1143
            L     S+W SPSRVSSLK SQ  +  ++ AST +GSLH L  +  +A+L+SE+SVPE  
Sbjct: 61   LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 1142 LHSVPESCIDLMEGGVECVTVGEDGRVNLVTVANSNLNYRRLFDSGGLVSYTAAKWASPM 963
            LH  P SC+D+M+GG EC+TV EDGRV+LV+V  S L+YRR+FDS GLVSY A KWASP 
Sbjct: 121  LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 962  EFATGGYGFGLQWWDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGT 783
            EF TGG GF LQWWDQRKPGG VSQFK NW    ASGIVH IDIHPSRKHTCLAGGS GT
Sbjct: 181  EFVTGGCGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTCLAGGSFGT 236

Query: 782  VLAWDLRWQQQPIILSXXXXXXXXXXXAVQSISESEVWEVQYDRCIKPNT----SSTRIL 615
            V AWDLR QQQPIILS              S  ESEVWEV YD  IK       SST+IL
Sbjct: 237  VFAWDLRSQQQPIILSGLEGSKTSN----PSPCESEVWEVHYDPYIKSGNLGGMSSTQIL 292

Query: 614  PAMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSFEWEAVAILTR 444
            PAMICSEDGIL  IEQG+EP+ELLAEPCAIN FDI+R +PS+VIC+ EWE+VAIL+R
Sbjct: 293  PAMICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349


>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  452 bits (1162), Expect = e-124
 Identities = 238/353 (67%), Positives = 269/353 (76%), Gaps = 6/353 (1%)
 Frame = -3

Query: 1484 SESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSF-KPNPLSFEF 1308
            S S QIHR PQ +YIDAVR+LP  S  +RFAV+A  D  S + S++IHS  K  P S   
Sbjct: 9    SHSLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNL 68

Query: 1307 QSSWASPSRVSSLKASQFLQKTIIAASTSSGSLHFLFADSTDATLESEVSVPEDALHSVP 1128
            QSS +  SRVSSL  S    K +IAAST SGSLH L  D  DA+++SE SVPE +LH   
Sbjct: 69   QSSLSLSSRVSSLSLSLSAHKPLIAASTFSGSLHILLLDF-DASVQSEFSVPEKSLHVGA 127

Query: 1127 ESCIDLMEGGVECVTVGEDGRVNLVTVAN-SNLNYRRLFDSGGLVSYTAAKWASPMEFAT 951
             SC+DL E GVECV+VGEDGRVNLV   + S L+YRR++DS GLVSYTAAKWASP EFAT
Sbjct: 128  ISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFAT 187

Query: 950  GGYGFGLQWWDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTVLAW 771
            GG+GFGLQWWD RKPGGPVSQFKGNW ++  SGIVHSIDIHPSRKHTCLAGGSLGTV AW
Sbjct: 188  GGFGFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTVFAW 247

Query: 770  DLRWQQQPIILSXXXXXXXXXXXAVQSISESEVWEVQYDRCIKP----NTSSTRILPAMI 603
            DLRWQQQPIILS           A  S  ESEVWEV+YD  ++     N SS+RILPAM+
Sbjct: 248  DLRWQQQPIILS----GVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAML 303

Query: 602  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSFEWEAVAILTR 444
            CSEDGIL V+EQGEEPIELLAEPCAINSFDIDR NPSDVICS EWE++AIL+R
Sbjct: 304  CSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356


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