BLASTX nr result

ID: Glycyrrhiza23_contig00004284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004284
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624976.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   159   1e-36
gb|ABD33037.2| Cyclin-like F-box [Medicago truncatula]                159   1e-36
ref|XP_003595967.1| F-box/LRR-repeat protein [Medicago truncatul...   158   2e-36
gb|ABD32495.1| Cyclin-like F-box [Medicago truncatula]                154   3e-35
ref|XP_003618591.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   154   3e-35

>ref|XP_003624976.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355499991|gb|AES81194.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 686

 Score =  159 bits (402), Expect = 1e-36
 Identities = 94/249 (37%), Positives = 134/249 (53%), Gaps = 10/249 (4%)
 Frame = -2

Query: 751  FSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCS----IPSKMDIVTSNLSSLEYSG 584
            FS+C  LE+++F  C     + + +P L HLKII C      PS++ I   NLSS EYS 
Sbjct: 333  FSECLQLEDVTFKNCRRMSSIEITSPKLRHLKIIDCGWADDSPSEIAIDALNLSSFEYSA 392

Query: 583  ESILVFSSINAPQISKIYVNLSSRWEVLEEFDVPHAFDXXXXXXXXXXXSMILSPSQVAR 404
             +  + S I A ++ K++      W+  +    PH  D           SMI+  SQ+  
Sbjct: 393  HTTRIIS-ITAHKLLKVF------WDAAQGRKTPHLLDPIARLSHIENLSMIILTSQIKE 445

Query: 403  LPPTIVPLQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIAN---- 236
            L   +V  Q+LR++EL +    D + DY WIL++ +A   LQKL + +    P  +    
Sbjct: 446  LTKVLVRFQNLRQLELLIEGTCDSSKDYFWILDIAIASQHLQKLSLTIRNVHPEHSHIDG 505

Query: 235  -QRPRRERPGFSHNELKYVELHGCVGQTIEIELAIHFLKNVNSLEQITFGPRSRTYLGDG 59
             +R +RE  GFSHN+LKYVE  GCVG    IELA H L++ NSL ++TF  R + Y+G G
Sbjct: 506  FKRQKREYTGFSHNDLKYVEFRGCVGSINVIELASHLLRSANSLRKMTFSSRDKAYIGAG 565

Query: 58   RWF-DGYDR 35
            RW  D  DR
Sbjct: 566  RWTRDANDR 574



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
 Frame = -2

Query: 970 ERIELLFSH-MNMPVNMPKLDPYRFPHALIS--DFISHLHLQNCHLLPHAEFPGFXXXXX 800
           +RIELL S    +P   P   PY FP  L+S  D +++LHLQNC    H +  GF     
Sbjct: 144 KRIELLLSSDFVLPYIFP---PYIFPPTLLSGNDSLTYLHLQNCLSAEHLDHSGFNNLRT 200

Query: 799 XXXXXXXXXXXXXXXLFSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCSIPSK--M 626
                          L S C HL +L+   C F   + +   TL  L I++C +     +
Sbjct: 201 LVLHLINVTPKLLQSLCSNCTHLVDLTLDGCRFLSDLIINRSTLLSLNIVNCRVDLSICL 260

Query: 625 DIVTSNLSSLEYS-GESILVFS-SINAPQISK 536
            I+ SNLSS EYS  +  LV   +I A  +SK
Sbjct: 261 TIIASNLSSFEYSCNDGFLVHPVNIQAHMLSK 292


>gb|ABD33037.2| Cyclin-like F-box [Medicago truncatula]
          Length = 598

 Score =  159 bits (402), Expect = 1e-36
 Identities = 94/249 (37%), Positives = 134/249 (53%), Gaps = 10/249 (4%)
 Frame = -2

Query: 751  FSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCS----IPSKMDIVTSNLSSLEYSG 584
            FS+C  LE+++F  C     + + +P L HLKII C      PS++ I   NLSS EYS 
Sbjct: 320  FSECLQLEDVTFKNCRRMSSIEITSPKLRHLKIIDCGWADDSPSEIAIDALNLSSFEYSA 379

Query: 583  ESILVFSSINAPQISKIYVNLSSRWEVLEEFDVPHAFDXXXXXXXXXXXSMILSPSQVAR 404
             +  + S I A ++ K++      W+  +    PH  D           SMI+  SQ+  
Sbjct: 380  HTTRIIS-ITAHKLLKVF------WDAAQGRKTPHLLDPIARLSHIENLSMIILTSQIKE 432

Query: 403  LPPTIVPLQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIAN---- 236
            L   +V  Q+LR++EL +    D + DY WIL++ +A   LQKL + +    P  +    
Sbjct: 433  LTKVLVRFQNLRQLELLIEGTCDSSKDYFWILDIAIASQHLQKLSLTIRNVHPEHSHIDG 492

Query: 235  -QRPRRERPGFSHNELKYVELHGCVGQTIEIELAIHFLKNVNSLEQITFGPRSRTYLGDG 59
             +R +RE  GFSHN+LKYVE  GCVG    IELA H L++ NSL ++TF  R + Y+G G
Sbjct: 493  FKRQKREYTGFSHNDLKYVEFRGCVGSINVIELASHLLRSANSLRKMTFSSRDKAYIGAG 552

Query: 58   RWF-DGYDR 35
            RW  D  DR
Sbjct: 553  RWTRDANDR 561



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
 Frame = -2

Query: 970 ERIELLFSH-MNMPVNMPKLDPYRFPHALIS--DFISHLHLQNCHLLPHAEFPGFXXXXX 800
           +RIELL S    +P   P   PY FP  L+S  D +++LHLQNC    H +  GF     
Sbjct: 131 KRIELLLSSDFVLPYIFP---PYIFPPTLLSGNDSLTYLHLQNCLSAEHLDHSGFNNLRT 187

Query: 799 XXXXXXXXXXXXXXXLFSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCSIPSK--M 626
                          L S C HL +L+   C F   + +   TL  L I++C +     +
Sbjct: 188 LVLHLINVTPKLLQSLCSNCTHLVDLTLDGCRFLSDLIINRSTLLSLNIVNCRVDLSICL 247

Query: 625 DIVTSNLSSLEYS-GESILVFS-SINAPQISK 536
            I+ SNLSS EYS  +  LV   +I A  +SK
Sbjct: 248 TIIASNLSSFEYSCNDGFLVHPVNIQAHMLSK 279


>ref|XP_003595967.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355485015|gb|AES66218.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 487

 Score =  158 bits (399), Expect = 2e-36
 Identities = 111/332 (33%), Positives = 169/332 (50%), Gaps = 11/332 (3%)
 Frame = -2

Query: 970  ERIELLFSHMNMPVNMPKLDPYRFPHALISDFISHLHLQNCHLLPHAEFPGFXXXXXXXX 791
            +RIELL S+ +   +   ++PY F  +  +D + +LHLQNC L P  +F           
Sbjct: 143  QRIELLLSYKSS--DNYSIEPYTFSLSE-NDCLKYLHLQNCLLSPPMDFSRLRKLTTLVL 199

Query: 790  XXXXXXXXXXXXLFSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCS-----IPS-- 632
                        LFS   +L +L+   C+F+  +N+  PTL HL I+         P   
Sbjct: 200  HLVVIEKHMLLGLFSNGVNLADLTLNNCKFDSDLNITCPTLCHLNIVDHKRHLRWAPPPR 259

Query: 631  --KMDIVTSNLSSLEYSG-ESILVFSSINAPQISKIYVNLSSRWEVLEEFDVPHAFDXXX 461
              K+DI    L   EYS  +    F+SI AP++SK Y N     ++    ++PHAFD   
Sbjct: 260  YWKIDIFALKLLCFEYSSRDGTFTFNSIRAPKLSKFYWN-----DLPMNEEIPHAFDIIA 314

Query: 460  XXXXXXXXSMILSPSQVARLPPTIVPLQHLREMELFLSFLQDDNDDYLWILNLVMACPRL 281
                    S+ L+ SQ+  LP ++ P Q+LR++ELF+S  +  N D+  IL++VMA PRL
Sbjct: 315  SLHQLQNLSINLTHSQITILPKSLGPFQYLRKLELFISD-EMPNHDFFRILDIVMASPRL 373

Query: 280  QKLYVGVSCPDPIANQRPRRERPGFSHNELKYVELHGCVGQTIEIELAIHFLKNV-NSLE 104
            Q+L+V +     +++    +E   FSHNELKYVE  GC  +  +  L  H   N+ +S +
Sbjct: 374  QELFVTIKDLHLVSDHEHMKEPERFSHNELKYVEFRGCECKAFQNLLDKHLWGNMKSSPK 433

Query: 103  QITFGPRSRTYLGDGRWFDGYDRPHWFETGHN 8
            +I F    + Y+G G W  GY + HW  +G N
Sbjct: 434  KIAFKSCGKFYVGAGIWIKGYSKDHWLGSGVN 465


>gb|ABD32495.1| Cyclin-like F-box [Medicago truncatula]
          Length = 630

 Score =  154 bits (389), Expect = 3e-35
 Identities = 92/238 (38%), Positives = 129/238 (54%), Gaps = 5/238 (2%)
 Frame = -2

Query: 751  FSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCSI----PSKMDIVTSNLSSLEYSG 584
            FSKC  LE+++F  C     + + +  L HLKII C      P ++ +V  NLSS EYSG
Sbjct: 370  FSKCCQLEDVTFKNCRIMYDLTITSRKLRHLKIIDCGYKHLTPDEITVVALNLSSFEYSG 429

Query: 583  ESILVFSSINAPQISKIYVNLSSRWEVLEEFDVPH-AFDXXXXXXXXXXXSMILSPSQVA 407
             +  +   + AP++ K++      W   +E   PH  F            +MI+ PSQ+A
Sbjct: 430  YTRELH--VKAPRLLKVF------WNATKEERYPHHLFGAIPRSRHVQNLAMIMMPSQIA 481

Query: 406  RLPPTIVPLQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRP 227
             L   +V  Q+L+++EL +    D N DY WIL+++MA   L+KL + +       + R 
Sbjct: 482  NLTKVLVQFQNLQQLELLIEGACDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQ 541

Query: 226  RRERPGFSHNELKYVELHGCVGQTIEIELAIHFLKNVNSLEQITFGPRSRTYLGDGRW 53
            RRE   F HN LKYVEL GCV     IELA H L+NVNSL+QITF    + Y+G  RW
Sbjct: 542  RREHGKFFHNYLKYVELRGCVCTMDVIELASHLLRNVNSLKQITFSSCDKFYIGAERW 599



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
 Frame = -2

Query: 970 ERIELLFSHMNMPVN--MPKLDPYRFPHALISDFIS--HLHLQNCHLLPHAEFPGFXXXX 803
           +RIELLFS+        + + +PY+FP  L+SD  S  HLHL+ C L+   +F GF    
Sbjct: 172 KRIELLFSNETNYTTDFIFEGEPYKFPFTLLSDTYSLTHLHLEKCLLVAPMDFSGFKNLR 231

Query: 802 XXXXXXXXXXXXXXXXLFSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCSIP---- 635
                           LFS C HL + +   C F   + + + TL HL I++C I     
Sbjct: 232 TLVLHIIDVSQDMFRGLFSNCIHLVDFTLDNCNFISDIQITSSTLFHLNIVNCGISIQER 291

Query: 634 SKMDIVTSNLSSLEYS 587
            K+DI   NLSS +YS
Sbjct: 292 KKIDISAPNLSSFQYS 307


>ref|XP_003618591.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355493606|gb|AES74809.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 640

 Score =  154 bits (389), Expect = 3e-35
 Identities = 92/238 (38%), Positives = 129/238 (54%), Gaps = 5/238 (2%)
 Frame = -2

Query: 751  FSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCSI----PSKMDIVTSNLSSLEYSG 584
            FSKC  LE+++F  C     + + +  L HLKII C      P ++ +V  NLSS EYSG
Sbjct: 380  FSKCCQLEDVTFKNCRIMYDLTITSRKLRHLKIIDCGYKHLTPDEITVVALNLSSFEYSG 439

Query: 583  ESILVFSSINAPQISKIYVNLSSRWEVLEEFDVPH-AFDXXXXXXXXXXXSMILSPSQVA 407
             +  +   + AP++ K++      W   +E   PH  F            +MI+ PSQ+A
Sbjct: 440  YTRELH--VKAPRLLKVF------WNATKEERYPHHLFGAIPRSRHVQNLAMIMMPSQIA 491

Query: 406  RLPPTIVPLQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRP 227
             L   +V  Q+L+++EL +    D N DY WIL+++MA   L+KL + +       + R 
Sbjct: 492  NLTKVLVQFQNLQQLELLIEGACDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQ 551

Query: 226  RRERPGFSHNELKYVELHGCVGQTIEIELAIHFLKNVNSLEQITFGPRSRTYLGDGRW 53
            RRE   F HN LKYVEL GCV     IELA H L+NVNSL+QITF    + Y+G  RW
Sbjct: 552  RREHGKFFHNYLKYVELRGCVCTMDVIELASHLLRNVNSLKQITFSSCDKFYIGAERW 609



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
 Frame = -2

Query: 970 ERIELLFSHMNMPVN--MPKLDPYRFPHALISDFIS--HLHLQNCHLLPHAEFPGFXXXX 803
           +RIELLFS+        + + +PY+FP  L+SD  S  HLHL+ C L+   +F GF    
Sbjct: 182 KRIELLFSNETNYTTDFIFEGEPYKFPFTLLSDTYSLTHLHLEKCLLVAPMDFSGFKNLR 241

Query: 802 XXXXXXXXXXXXXXXXLFSKCFHLEELSFIKCEFNDVVNMINPTLHHLKIISCSIP---- 635
                           LFS C HL + +   C F   + + + TL HL I++C I     
Sbjct: 242 TLVLHIIDVSQDMFRGLFSNCIHLVDFTLDNCNFISDIQITSSTLFHLNIVNCGISIQER 301

Query: 634 SKMDIVTSNLSSLEYS 587
            K+DI   NLSS +YS
Sbjct: 302 KKIDISAPNLSSFQYS 317


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