BLASTX nr result

ID: Glycyrrhiza23_contig00004266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004266
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ87021.1| VDAC1.3 [Lotus japonicus]                              507   e-141
ref|XP_003532049.1| PREDICTED: mitochondrial outer membrane prot...   493   e-137
ref|NP_001241054.1| uncharacterized protein LOC100805016 [Glycin...   489   e-136
gb|ACJ85279.1| unknown [Medicago truncatula] gi|388490588|gb|AFK...   454   e-125
gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]                     452   e-124

>gb|AAQ87021.1| VDAC1.3 [Lotus japonicus]
          Length = 276

 Score =  507 bits (1306), Expect = e-141
 Identities = 254/276 (92%), Positives = 267/276 (96%)
 Frame = -3

Query: 1162 MVKGPGLYTDIGKKARDLLFKDYQNDHKVTITTQTATGVEITSTGVRKGEVYLADVTTKL 983
            MVKGPGLY+DIGKKARDLLFKDYQNDHK TITT T+ GVEITSTGV+KGE+YLADV+TKL
Sbjct: 1    MVKGPGLYSDIGKKARDLLFKDYQNDHKFTITTYTSAGVEITSTGVKKGEIYLADVSTKL 60

Query: 982  KNKNITTDVKVDTNSNLLTTITVDELAPGLKTILSFIFPDQKSGKVELQYQHEYAGISTS 803
            KNKNITTDVKVDTNSNL TTITVDE APGLKTI SFIFPDQKSGKVELQYQHEYAGISTS
Sbjct: 61   KNKNITTDVKVDTNSNLHTTITVDEPAPGLKTIFSFIFPDQKSGKVELQYQHEYAGISTS 120

Query: 802  IGLTASPIVNFSGVIGNNLVSVGTDLSFDTASGNFVKYNAALNVTHADLIASLIVNDKGD 623
            IGLTASPIVNFSG+IGNNLV+VGTDLSFDTASGNF KYNA LNVTHADLIASL +NDKGD
Sbjct: 121  IGLTASPIVNFSGIIGNNLVAVGTDLSFDTASGNFTKYNAGLNVTHADLIASLTLNDKGD 180

Query: 622  TLNASYYHIVSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL 443
            +LNASYYH+VSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL
Sbjct: 181  SLNASYYHVVSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL 240

Query: 442  IQHDWNPRTKVSLVGEVDTGAIEKSAKVGLAVALKP 335
            IQH+WNPRT+VSLVGEVDTGAIEKSAKVGLA+ALKP
Sbjct: 241  IQHEWNPRTRVSLVGEVDTGAIEKSAKVGLALALKP 276


>ref|XP_003532049.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like
            [Glycine max]
          Length = 276

 Score =  493 bits (1268), Expect = e-137
 Identities = 244/276 (88%), Positives = 261/276 (94%)
 Frame = -3

Query: 1162 MVKGPGLYTDIGKKARDLLFKDYQNDHKVTITTQTATGVEITSTGVRKGEVYLADVTTKL 983
            MVKGPGLY+DIGK+ARDLLFKDYQNDHK TITT T+TGVEITSTGVRKGE+YLADV+TK+
Sbjct: 1    MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTYTSTGVEITSTGVRKGEIYLADVSTKV 60

Query: 982  KNKNITTDVKVDTNSNLLTTITVDELAPGLKTILSFIFPDQKSGKVELQYQHEYAGISTS 803
            KNKNITTDVKVDTNSNL TTITVDE APGLKTI SF FPDQKSGKVELQYQHEYAGI+TS
Sbjct: 61   KNKNITTDVKVDTNSNLRTTITVDEPAPGLKTIFSFNFPDQKSGKVELQYQHEYAGINTS 120

Query: 802  IGLTASPIVNFSGVIGNNLVSVGTDLSFDTASGNFVKYNAALNVTHADLIASLIVNDKGD 623
            IGLTA+P+VNFSGV+GNNLV+VGTDLSFDTASGNF KYNA LN+THADLIASL +NDKGD
Sbjct: 121  IGLTANPVVNFSGVVGNNLVAVGTDLSFDTASGNFTKYNAGLNITHADLIASLTLNDKGD 180

Query: 622  TLNASYYHIVSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL 443
             L ASYYHIV+PLTNTAVGAELSHSFS NENILT GTQHALDP+TLLK+RVNNYGRASAL
Sbjct: 181  NLTASYYHIVNPLTNTAVGAELSHSFSGNENILTFGTQHALDPLTLLKSRVNNYGRASAL 240

Query: 442  IQHDWNPRTKVSLVGEVDTGAIEKSAKVGLAVALKP 335
            IQHDW PRT+ SLVGEVDTGAIEKSAKVGLAVALKP
Sbjct: 241  IQHDWTPRTRFSLVGEVDTGAIEKSAKVGLAVALKP 276


>ref|NP_001241054.1| uncharacterized protein LOC100805016 [Glycine max]
            gi|255641654|gb|ACU21099.1| unknown [Glycine max]
          Length = 276

 Score =  489 bits (1260), Expect = e-136
 Identities = 243/276 (88%), Positives = 259/276 (93%)
 Frame = -3

Query: 1162 MVKGPGLYTDIGKKARDLLFKDYQNDHKVTITTQTATGVEITSTGVRKGEVYLADVTTKL 983
            MVKGPGLY+DIGK+ARDLLFKDYQNDHK TITT T+TGVEITSTGVRKGE+YLADV+TK+
Sbjct: 1    MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTYTSTGVEITSTGVRKGEIYLADVSTKV 60

Query: 982  KNKNITTDVKVDTNSNLLTTITVDELAPGLKTILSFIFPDQKSGKVELQYQHEYAGISTS 803
            KNKNITTDVKVDTNSNL T ITVDE APGLKTI SF FPDQKSGKVELQYQHEYAGISTS
Sbjct: 61   KNKNITTDVKVDTNSNLRTIITVDEPAPGLKTIFSFNFPDQKSGKVELQYQHEYAGISTS 120

Query: 802  IGLTASPIVNFSGVIGNNLVSVGTDLSFDTASGNFVKYNAALNVTHADLIASLIVNDKGD 623
            IGLTA+P+VNFSGV+GNNLV+VGTDLSFDT SGNF KYNA LN+THADLIASL +NDKGD
Sbjct: 121  IGLTANPVVNFSGVVGNNLVAVGTDLSFDTTSGNFTKYNAGLNITHADLIASLTLNDKGD 180

Query: 622  TLNASYYHIVSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL 443
             L ASYYHIV+PLTN+AVGAELSHSFS NENILT GTQHALDP+TLLKARVNNYGRASAL
Sbjct: 181  NLTASYYHIVNPLTNSAVGAELSHSFSGNENILTFGTQHALDPLTLLKARVNNYGRASAL 240

Query: 442  IQHDWNPRTKVSLVGEVDTGAIEKSAKVGLAVALKP 335
            IQHDW PRT+ SLVGEVDTGAIEKSAKVGLAVALKP
Sbjct: 241  IQHDWTPRTRFSLVGEVDTGAIEKSAKVGLAVALKP 276


>gb|ACJ85279.1| unknown [Medicago truncatula] gi|388490588|gb|AFK33360.1| unknown
            [Medicago truncatula]
          Length = 276

 Score =  454 bits (1168), Expect = e-125
 Identities = 223/276 (80%), Positives = 252/276 (91%)
 Frame = -3

Query: 1162 MVKGPGLYTDIGKKARDLLFKDYQNDHKVTITTQTATGVEITSTGVRKGEVYLADVTTKL 983
            MVKGPGLY+DIGK+ARDLLFKDYQNDHK TITTQT  GVEITS GVRKGE +LADV+TK+
Sbjct: 1    MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTQTLAGVEITSAGVRKGEAFLADVSTKV 60

Query: 982  KNKNITTDVKVDTNSNLLTTITVDELAPGLKTILSFIFPDQKSGKVELQYQHEYAGISTS 803
            KNKN+TTD+KVDTNSNL TTITVDE  PGLKTI SFI+P+QKSGKVELQY H+YAGISTS
Sbjct: 61   KNKNVTTDIKVDTNSNLRTTITVDETVPGLKTIFSFIYPEQKSGKVELQYLHDYAGISTS 120

Query: 802  IGLTASPIVNFSGVIGNNLVSVGTDLSFDTASGNFVKYNAALNVTHADLIASLIVNDKGD 623
            IGLTA+P VN S V+GNNLVSVG+D+SF+T+SG+  K N  LNVTHADLIASL VND+GD
Sbjct: 121  IGLTATPTVNISAVLGNNLVSVGSDVSFETSSGSLNKCNFGLNVTHADLIASLTVNDRGD 180

Query: 622  TLNASYYHIVSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL 443
            +LNASYYH+VSPLTNTAVGAELSHSFSSNEN+LTIGTQHALDP+TLLKA+VNNYG+ASAL
Sbjct: 181  SLNASYYHVVSPLTNTAVGAELSHSFSSNENVLTIGTQHALDPVTLLKAKVNNYGKASAL 240

Query: 442  IQHDWNPRTKVSLVGEVDTGAIEKSAKVGLAVALKP 335
            IQHDW+ + + SLVGEVDT AI+K+AKVGLA ALKP
Sbjct: 241  IQHDWSRQARFSLVGEVDTAAIQKTAKVGLACALKP 276


>gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
          Length = 276

 Score =  452 bits (1162), Expect = e-124
 Identities = 222/276 (80%), Positives = 250/276 (90%)
 Frame = -3

Query: 1162 MVKGPGLYTDIGKKARDLLFKDYQNDHKVTITTQTATGVEITSTGVRKGEVYLADVTTKL 983
            MVKGPGLY DIGKKARDLL+KDYQ+DHK T+TT T+TGV I+STG+RKG++YL DV+T+L
Sbjct: 1    MVKGPGLYLDIGKKARDLLYKDYQSDHKFTVTTYTSTGVAISSTGIRKGDLYLGDVSTQL 60

Query: 982  KNKNITTDVKVDTNSNLLTTITVDELAPGLKTILSFIFPDQKSGKVELQYQHEYAGISTS 803
            KNKNITTDVKVDT+SNL TTIT+DE APGLK I SFI PDQ+SGKVELQYQHEYAGISTS
Sbjct: 61   KNKNITTDVKVDTDSNLRTTITIDEPAPGLKAIFSFIVPDQRSGKVELQYQHEYAGISTS 120

Query: 802  IGLTASPIVNFSGVIGNNLVSVGTDLSFDTASGNFVKYNAALNVTHADLIASLIVNDKGD 623
            IGLTA+PIVNFSGV+GNNL+S+GTDLSFDTASGNF K NA LN TH DLIASLI+NDK D
Sbjct: 121  IGLTANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLILNDKAD 180

Query: 622  TLNASYYHIVSPLTNTAVGAELSHSFSSNENILTIGTQHALDPITLLKARVNNYGRASAL 443
            T+ ASYYH VSPLTNTAVGAELSHSFSSNEN LTIGTQHALDP+T +K RVNNYGRASAL
Sbjct: 181  TVTASYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYGRASAL 240

Query: 442  IQHDWNPRTKVSLVGEVDTGAIEKSAKVGLAVALKP 335
            IQH+W P++  ++ GEVDT AIEKSAK+GLA+ALKP
Sbjct: 241  IQHEWRPKSFFTISGEVDTRAIEKSAKIGLALALKP 276


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