BLASTX nr result
ID: Glycyrrhiza23_contig00004250
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00004250 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly... 77 2e-12 ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory pr... 73 3e-11 gb|AFK36394.1| unknown [Lotus japonicus] 71 1e-10 gb|ACU16972.1| unknown [Glycine max] 70 1e-10 ref|XP_003549765.1| PREDICTED: ribosome biogenesis regulatory pr... 69 5e-10 >ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max] Length = 351 Score = 76.6 bits (187), Expect = 2e-12 Identities = 33/46 (71%), Positives = 41/46 (89%) Frame = +2 Query: 227 MEIEGEKQKLFEVDLGNLLAFDSHHTFPSQSPLSREELVNHCLHKG 364 M++EGEKQ+ F+VDLGNL+AFDS+HTFPSQ PLSRE+L+ HC KG Sbjct: 1 MQMEGEKQQKFDVDLGNLVAFDSYHTFPSQPPLSREDLIKHCFLKG 46 >ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 1 [Glycine max] Length = 332 Score = 72.8 bits (177), Expect = 3e-11 Identities = 33/46 (71%), Positives = 39/46 (84%) Frame = +2 Query: 227 MEIEGEKQKLFEVDLGNLLAFDSHHTFPSQSPLSREELVNHCLHKG 364 ME+EGEKQ F+VDLGNL+AFDS+HTFPSQ LSRE+L+ CL KG Sbjct: 1 MEMEGEKQHKFDVDLGNLMAFDSYHTFPSQPSLSREDLIKQCLLKG 46 >gb|AFK36394.1| unknown [Lotus japonicus] Length = 351 Score = 70.9 bits (172), Expect = 1e-10 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%) Frame = +2 Query: 227 MEIEG-EKQKLFEVDLGNLLAFDSHHTFPSQSPLSREELVNHCLHKG 364 MEI+G E QK+FEVDLG+L+AFDSHHTFP+Q PLSRE+LV L KG Sbjct: 1 MEIDGVEHQKVFEVDLGHLMAFDSHHTFPTQPPLSREDLVKQALQKG 47 >gb|ACU16972.1| unknown [Glycine max] Length = 147 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +2 Query: 227 MEIEGEKQKLFEVDLGNLLAFDSHHTFPSQSPLSREELVNHCLHKG 364 ME+EGEKQ F+VDLGNL+AFD +HTFPSQ LSRE+L+ CL KG Sbjct: 1 MEMEGEKQHKFDVDLGNLMAFDFYHTFPSQPSLSREDLIKQCLLKG 46 >ref|XP_003549765.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Glycine max] Length = 331 Score = 68.6 bits (166), Expect = 5e-10 Identities = 31/44 (70%), Positives = 36/44 (81%) Frame = +2 Query: 233 IEGEKQKLFEVDLGNLLAFDSHHTFPSQSPLSREELVNHCLHKG 364 +E EKQ F+VDLGNL+AFDS+HTFPSQ PLSRE+L CL KG Sbjct: 1 MEAEKQHQFDVDLGNLMAFDSYHTFPSQPPLSREDLTRQCLLKG 44