BLASTX nr result

ID: Glycyrrhiza23_contig00004245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00004245
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ83941.1| unknown [Medicago truncatula]                          401   e-109
gb|AFK34587.1| unknown [Medicago truncatula]                          400   e-109
ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|...   382   e-103
ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|...   370   e-100
gb|ACJ84192.1| unknown [Medicago truncatula]                          363   6e-98

>gb|ACJ83941.1| unknown [Medicago truncatula]
          Length = 248

 Score =  401 bits (1031), Expect = e-109
 Identities = 198/264 (75%), Positives = 215/264 (81%), Gaps = 2/264 (0%)
 Frame = -2

Query: 1285 MTTQRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADL 1106
            MTTQR+HVPKFGNW+ E++VPYT YFDKARK RPGSKMINPNDPEEN D VL+NSSS D+
Sbjct: 1    MTTQRSHVPKFGNWEGEDDVPYTVYFDKARKSRPGSKMINPNDPEENPDLVLQNSSSDDV 60

Query: 1105 PPSNRRVHSENLSEKGSVRSTQ-ELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRP 929
             P   RV SEN SEKG+VR T  +LQK+KE+GD+KH   SPAR                P
Sbjct: 61   IPPKPRVSSENQSEKGTVRLTHNDLQKNKEEGDVKHSVNSPAR----------------P 104

Query: 928  GGHGAGSADARRRPSRQSTGS-EYSVERSPLHRQAKTPGRDSPVWEGKNSYDSSHGTPGR 752
            GGHG GSAD+RRRPSRQST S EYSVERSPLHRQAKTPGRDSP WEGK++YDSSHGTPGR
Sbjct: 105  GGHGVGSADSRRRPSRQSTASSEYSVERSPLHRQAKTPGRDSPSWEGKSTYDSSHGTPGR 164

Query: 751  SRLRQVNRGDETPDGGAAVPKFGEWDESNPASADGYTHIFNKVREEKHVGAGHAPGTPNG 572
            SRLR VNR DE PD  AAVPKFGEWDES+PASADGYTHIFNKVREEKHV AG+ PGTPNG
Sbjct: 165  SRLRPVNRDDEIPDKSAAVPKFGEWDESDPASADGYTHIFNKVREEKHVAAGNTPGTPNG 224

Query: 571  RSYVIPNQPANNKAQSCCFCWSRK 500
            RSYVI NQPAN+KAQ CCF W RK
Sbjct: 225  RSYVIRNQPANDKAQGCCFFWGRK 248


>gb|AFK34587.1| unknown [Medicago truncatula]
          Length = 248

 Score =  400 bits (1027), Expect = e-109
 Identities = 197/264 (74%), Positives = 214/264 (81%), Gaps = 2/264 (0%)
 Frame = -2

Query: 1285 MTTQRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADL 1106
            MTTQR+HVPKFGNW+ E++VPYT YFDKARK RPGSKMINPNDPEEN D VL+NSSS D+
Sbjct: 1    MTTQRSHVPKFGNWEGEDDVPYTVYFDKARKSRPGSKMINPNDPEENPDLVLQNSSSDDV 60

Query: 1105 PPSNRRVHSENLSEKGSVRSTQ-ELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRP 929
             P   RV SEN SEKG+VR T  +LQK+KE+GD+KH   SPAR                P
Sbjct: 61   IPPKPRVSSENQSEKGTVRLTHNDLQKNKEEGDVKHSVNSPAR----------------P 104

Query: 928  GGHGAGSADARRRPSRQSTGS-EYSVERSPLHRQAKTPGRDSPVWEGKNSYDSSHGTPGR 752
            GGHG GSAD+RRRPSRQST S EYSVERSPLHRQAKTPGRDSP WEGK++YDSSHGTPGR
Sbjct: 105  GGHGVGSADSRRRPSRQSTASSEYSVERSPLHRQAKTPGRDSPSWEGKSTYDSSHGTPGR 164

Query: 751  SRLRQVNRGDETPDGGAAVPKFGEWDESNPASADGYTHIFNKVREEKHVGAGHAPGTPNG 572
            SRLR VNR DE PD  AAVPKFGEWDE +PASADGYTHIFNKVREEKHV AG+ PGTPNG
Sbjct: 165  SRLRPVNRDDEIPDKSAAVPKFGEWDEGDPASADGYTHIFNKVREEKHVAAGNTPGTPNG 224

Query: 571  RSYVIPNQPANNKAQSCCFCWSRK 500
            RSYVI NQPAN+KAQ CCF W RK
Sbjct: 225  RSYVIRNQPANDKAQGCCFFWGRK 248


>ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|ACU24535.1| unknown
            [Glycine max] gi|300079889|gb|ADJ67470.1| RIN4d protein
            [Glycine max]
          Length = 248

 Score =  382 bits (980), Expect = e-103
 Identities = 191/259 (73%), Positives = 210/259 (81%)
 Frame = -2

Query: 1276 QRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADLPPS 1097
            Q ++VPKFGN +SE+NV  TA+ DKA+KG+ GSKMINPND +ENSD V    SSADLP S
Sbjct: 3    QHSNVPKFGNQESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDIV----SSADLPHS 58

Query: 1096 NRRVHSENLSEKGSVRSTQELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRPGGHG 917
              RVHSE+ S KGSVR+T ELQKS+EDGD K  T SPAR         GGDS+HR  GHG
Sbjct: 59   KPRVHSEDPSGKGSVRTTHELQKSREDGDPKQFTDSPARHG-------GGDSSHR--GHG 109

Query: 916  AGSADARRRPSRQSTGSEYSVERSPLHRQAKTPGRDSPVWEGKNSYDSSHGTPGRSRLRQ 737
             GSAD R+RPSRQSTG E++++RSPLHRQAKTPGRDSP WEGKNSYDSSHGTPGRSRLR 
Sbjct: 110  VGSADNRKRPSRQSTGPEHNIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRP 169

Query: 736  VNRGDETPDGGAAVPKFGEWDESNPASADGYTHIFNKVREEKHVGAGHAPGTPNGRSYVI 557
              RGDETPD GAAVPKFGEWDESNPASADGYTHIFNKVREEK VGAGH PGTPNGR Y  
Sbjct: 170  SYRGDETPDEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYAA 229

Query: 556  PNQPANNKAQSCCFCWSRK 500
             NQ AN+KAQSCCFCW +K
Sbjct: 230  RNQRANDKAQSCCFCWGKK 248


>ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|ADJ67469.1| RIN4c protein
            [Glycine max]
          Length = 246

 Score =  370 bits (949), Expect = e-100
 Identities = 189/259 (72%), Positives = 205/259 (79%)
 Frame = -2

Query: 1276 QRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADLPPS 1097
            QR++VP  G   SEENV  TA+ DKA+KG+PGSKMINPND +ENSD V    SSA LP S
Sbjct: 3    QRSNVPMLGK--SEENVSDTAHSDKAQKGQPGSKMINPNDTKENSDVV----SSAGLPHS 56

Query: 1096 NRRVHSENLSEKGSVRSTQELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRPGGHG 917
              RVHSE+ S KGSVRS  ELQ S+EDGD K  T SPAR         G DS +R  GHG
Sbjct: 57   KPRVHSEDPSGKGSVRSIHELQMSREDGDPKQFTDSPARHG-------GSDSAYR--GHG 107

Query: 916  AGSADARRRPSRQSTGSEYSVERSPLHRQAKTPGRDSPVWEGKNSYDSSHGTPGRSRLRQ 737
             GSAD R+RPSRQSTGSE+S++RSPLHRQAKTPGRDSP WEGKNSYDSSHGTPGRSRLR 
Sbjct: 108  VGSADNRKRPSRQSTGSEHSIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRP 167

Query: 736  VNRGDETPDGGAAVPKFGEWDESNPASADGYTHIFNKVREEKHVGAGHAPGTPNGRSYVI 557
             NRGDETPD GAAVPKFGEWDESNPASADGYTHIFNKVREEK VGAGH P TPNGR Y  
Sbjct: 168  PNRGDETPDKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPVTPNGRQYAA 227

Query: 556  PNQPANNKAQSCCFCWSRK 500
             NQPA++KAQSCCFCW +K
Sbjct: 228  RNQPADDKAQSCCFCWGKK 246


>gb|ACJ84192.1| unknown [Medicago truncatula]
          Length = 260

 Score =  363 bits (932), Expect = 6e-98
 Identities = 193/264 (73%), Positives = 211/264 (79%), Gaps = 5/264 (1%)
 Frame = -2

Query: 1276 QRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADLPPS 1097
            QRTHVPKFGNW+S +NVPYTAYFD+ARKGR G+KMINPNDPEEN D VL+NSSS   PPS
Sbjct: 3    QRTHVPKFGNWESNDNVPYTAYFDEARKGRTGTKMINPNDPEENVDLVLDNSSSDHPPPS 62

Query: 1096 NR--RVHSENLSEKGSVRSTQELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRPGG 923
            N   R +SE+LS KG VRST E  KS  DGD K    SPAR +  +N+S+  DST RPG 
Sbjct: 63   NTKPRANSEDLSGKGLVRSTIESHKSL-DGDPKQYVDSPARHDNASNRSSN-DSTPRPG- 119

Query: 922  HGAGSADARRRPSRQST-GSEYSVERSPLHRQAKTP-GRDSPVWEGKN-SYDSSHGTPGR 752
               GSAD RRRPSRQST GSE+SVERSPLHRQA+ P GRDSP WEGKN SYDSSHGTPGR
Sbjct: 120  --VGSADNRRRPSRQSTAGSEHSVERSPLHRQARAPAGRDSPSWEGKNNSYDSSHGTPGR 177

Query: 751  SRLRQVNRGDETPDGGAAVPKFGEWDESNPASADGYTHIFNKVREEKHVGAGHAPGTPNG 572
            SRLR  NRGDETPD GAAVPKFG+WD SNPASADGYTHIFNKVREE+  GAGHAPGTPN 
Sbjct: 178  SRLRPANRGDETPDKGAAVPKFGDWDVSNPASADGYTHIFNKVREERQGGAGHAPGTPNE 237

Query: 571  RSYVIPNQPANNKAQSCCFCWSRK 500
            R +VI NQ  N+KAQ CCF W +K
Sbjct: 238  RPHVIRNQ-NNDKAQCCCFAWGKK 260


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